Mya arenaria (softshell): 128208992
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Entry
128208992 CDS
T09995
Name
(RefSeq) serine-arginine protein 55-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
maea
Mya arenaria (softshell)
Pathway
maea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128208992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
maea03041
]
128208992
Spliceosome [BR:
maea03041
]
Common components
Common spliceosomal components
SR proteins
128208992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
SPOR
SET_assoc
Lig_C
RRM_3
RRM_7
Motif
Other DBs
NCBI-GeneID:
128208992
NCBI-ProteinID:
XP_052768736
LinkDB
All DBs
Position
11:complement(65332505..65343987)
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AA seq
274 aa
AA seq
DB search
MSAAGTRVYVGRVPNDARDKDIERFFKGYGRLREILMKNGYTFVEFDDPRDADDAVYELN
GKEMLGERLIIEHARASRRGGPRERAGGFGDRYGGGGGRFGGGGGYGGGYGGGGGRFGGG
GGRDRYGDSGYNSRRPSGGGRYGPPQRTDYRLRVENLSSRASWQDLKDHMRTAGVEVTFA
DAHKQRTGEGVVEFSTESDMLRAIDKLDSSDINGKKIKLVEEGRGGRGGGRRSYSRSRSR
SRSRSDSRSSRSSRSSTPPKKRSRTKSGDDEEDD
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgcaggaacaagagtgtacgttgggagagtgcctaatgatgcaagggataaa
gatattgaaaggtttttcaaagggtatggcaggctacgggaaatcttgatgaagaatggc
tacacatttgtggagtttgatgacccaagagatgctgatgatgctgtgtatgaattgaat
ggaaaagaaatgctcggtgaaaggttaatcatagaacatgccagggcttcaaggcgaggg
ggcccaagggaaagggccggtggattcggagacagatacggtggtggaggaggtcggttt
ggtggtggtggtggatatggaggaggatacggcggaggtggtggccggtttggtgggggc
gggggcagagacaggtacggggactcgggatacaacagccggcgacccagtggtgggggc
agatatgggccaccccagagaactgactacagactgagagttgaaaatctttcatctaga
gcaagctggcaggacctgaaggaccacatgaggactgctggtgtggaggttacctttgct
gatgcccacaaacagaggactggtgaaggagtggtcgaattttcaacagagtcggacatg
ctgcgtgccatcgacaagcttgacagctccgacatcaacggcaagaagatcaaactggtc
gaggaaggacgaggaggtcgtggaggtggcagacgaagctattcacgcagtcgatccagg
tctcgctcaaggtctgacagccgaagctcaaggagcagtcgatcaagtacgccacccaag
aaacgctcccgtacaaaatcaggagatgatgaggaggatgattga
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