Mya arenaria (softshell): 128209486
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Entry
128209486 CDS
T09995
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
maea03016
]
128209486
03036 Chromosome and associated proteins [BR:
maea03036
]
128209486
Enzymes [BR:
maea01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
128209486
Transfer RNA biogenesis [BR:
maea03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
128209486
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
128209486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
GMP_synt_C
Motif
Other DBs
NCBI-GeneID:
128209486
NCBI-ProteinID:
XP_052769493
LinkDB
All DBs
Position
11:complement(49794483..49843569)
Genome browser
AA seq
1580 aa
AA seq
DB search
MDTDDFLKTIVINSNFDLKETLSKLVSATESRLKAGFQQADINLYIHELATINQVLISGE
GFFNKENKNYLITTSDRIIGNICEPLVQSVLPSTDSGTNLQVLLGVLGQLYSQCALVDEE
TLKNALCRLEGHINIFLNEKLSKSNFESDKGLVDFRTVIEVLKYIVSAVCKRPDFKWTKE
QNEKLDALFEKLVTSLDILTVNVIGTLCIPVLLKILKINEISYTENVRKVWSQILLFSTS
SVEDKRKPFILLCGFANQFFPVDGNVCNLDIRRDTQFWTILQAGLHSKDSLNRKRALYLL
KRIVDICERDGADVSSEGDSGSGQHVGHSEGRHPVFWWERGQSKALSKVWEDFILLAEVL
EEKQVHVIKPLLPRMDTLLKACTLPKETGRALLHTSWLKVVLLRCSLHESLQVIRWGANT
ALALDVRHCPVIEQGFLKYLSGEMLLSLREPKLYVREVGSGTGSMPQIAERLVTFFQGCW
HALPSSHRGVYFCGTVETLCGGDWGPIPLLFTLRALAALPPAPCLDANTLRATRKWLTAD
LVSMYSFYRGMIQVFFVKILTKLIDKTLVPLEEVLQILSLVGRDECLVRGSVVWQDCVQF
LAQPVEDDTSGWSGRGIKMYIHKILKQYLETSIDSKYSTADSVPALTVARLVMLTSTDTM
ATKMEESPCKTVAEVCEQVISVVNSINSHVYMSPHLADKALLLLNMLADEMGLSAWSSDD
PVSVILQGTVDRCKGEMVRYISTQIIQGCTQMGDVWRIQLYMDSVSMLGKAGGGHPGQGA
DLYRLLETCITPFLNLQFTQSSGLHEKLQQLGCMGVLGTVANFLSNSPATQACSDLIGQL
SDFMKKWKIITNFNKPTMDISVNKQEWGKFSSQFLTSQWQVVQLVLDRSCGPCLDIQELL
PLAREALTVGVEETAIVVLKCLKLAISKNTVGEEALCDILDGSWMCLQGARRTITFWDVL
DAFTCLAFHPALLVSPKNSPVIAKLNIYAEGLLELGQDKNGVVNAMCDQLYAGLTGPGMI
INASKFVPLIVQLCMFGNLVQRCVRQVYDICAALEMTREHCPDNPRLNIVKNEDIEVKVK
VISLLCHLDPSDPSHCHLATSVVKECLKKYVAVSKGSANRFSNSLVHRQRHRLIQTVLLL
QGLVTKDYVDELWAEMWVSLEVETQPSVRHILEWVIIWALHRHQHLRLQLWSIFDKYRNT
KHLTMSSLLCIVIHLGPKLPKEEQEVFYRQALGNVLPWCMAHHFQTRLYSQAVLSKLWAQ
AGRLGLTAIHTANPILQTIVDFNQENRNSTKNVRKLLDSFFFKFLDFKDDFSLETLYKVM
PQMTGLSEEDWIAPELFPMTCPAWALGSGPTFINIRNPPNQFDKCDPSLWKYTTLKLAEA
EVEEGGGERDVQKKIMPWRQMLLEEEVVSEVDHGVKVGPTDGLVVVTSLINKVPNLGGLC
RTSEIFGVSEYVLGKLQYVEDTSFQGLSVTAHKWIPITEVHETDLSDYLQQRRQAGYTLV
GVEQTANSVSLTDYTFPTKTLLLLGNEKEGIPVDLISQLDVCVEIPQQGVIRSLNVHVSG
AILIWEYRRQQLMKETSSSS
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atggatactgatgactttttgaagacgattgttatcaattccaactttgatttaaaagaa
acactatctaaacttgtttctgccacagaaagtagattgaaagctgggttccaacaggca
gacataaatttatacattcatgaattagcaacaatcaatcaagttttgatttctggtgaa
gggttttttaataaagagaacaagaattacctgataacaacttctgaccgaataataggg
aacatttgtgagccactagtgcagtctgtccttccctcaactgactccggcacaaacctg
caggttctccttggtgttcttggccagctgtattcacaatgtgctctggtagatgaggag
acactgaagaatgctttgtgcagattagaaggacatattaacatcttcctgaatgagaaa
ctttcaaagtcaaactttgaaagtgacaagggtttggtagacttccgtacagtcattgag
gttctgaagtatatcgtaagtgcagtctgtaagagacctgacttcaagtggaccaaggag
cagaatgaaaaactagatgccctgtttgaaaaactagtgacatcattggacattctaact
gtgaatgtgataggtaccctgtgtattcctgttttgttgaagattttgaaaataaatgaa
atatcatacactgaaaatgtaaggaaagtgtggtcacaaattctgctattttctacttcc
tctgttgaagataaaaggaaaccattcattctgctttgtggatttgccaatcaattcttc
ccagtagatggaaatgtatgcaacttggatatacgtcgagacactcaattttggacaatt
ttacaggcaggtcttcatagtaaggattcattgaacagaaaaagggcattatacttgttg
aagcgtattgttgacatctgtgagagagatggggctgatgtcagcagtgagggtgacagt
ggttccggtcaacatgtggggcatagtgaggggagacatcctgtgttctggtgggagagg
gggcagagcaaagcactgtccaaggtctgggaggacttcatcctgctggcagaggtcctg
gaggaaaaacaggttcatgtgatcaagccacttttgcctcgcatggacaccttactgaaa
gcctgtacactgccaaaagaaactgggcgtgcactactgcacacatcatggttgaaggtg
gtgctgttacgctgctcgctccatgagagtctacaggtgatacgctggggggcaaacacc
gccctcgctctggatgtcaggcactgtcccgtcattgaacagggctttctcaagtacctg
tccggggaaatgctgctttctctccgggaacccaagctctatgtcagggaggttgggtct
ggcacagggtcaatgccgcagatagctgagagactcgtcactttctttcagggatgctgg
catgctctaccatcctctcacagaggtgtgtatttctgtggaacagtggagacgctttgt
gggggggattggggtccgatcccgctcctgttcaccttacgtgccctggctgccttgccc
cctgcaccctgcctcgatgccaacacgctacgtgctaccaggaagtggttgacagcagac
cttgtttccatgtattcgttctaccgaggaatgattcaggtgttcttcgttaaaattctc
accaaacttattgacaagacactggtgccactggaagaggtactccagattctgagcctt
gtagggcgggatgaatgtctggtgaggggatctgtagtctggcaggactgtgtgcagttc
ctggcacagccagtggaggatgacacatcagggtggtcaggaagaggaataaagatgtac
atacacaagattctgaaacaataccttgagactagcattgattccaaatatagcactgca
gatagtgttcctgcgctgacagttgccaggctggtgatgttgacttccacagacaccatg
gcaaccaaaatggaggagtctccgtgtaagacagttgcagaagtgtgtgagcaggtgatc
tctgtggtcaactccatcaactcccacgtctatatgtccccacacctggcagacaaggct
ctactcctcctcaacatgctcgctgatgaaatgggtctctctgcatggagtagtgatgat
ccagtgagtgtgatcctgcagggaacagtggatcgttgcaagggggagatggtgaggtac
atctcaacacagatcatccaaggatgcacacagatgggagatgtgtggaggatacagttg
tacatggacagtgtgtcaatgctgggcaaggctggaggcgggcacccagggcagggcgca
gatctctatcgtctcctggaaacctgtataacacccttccttaatctccagttcactcag
agttctggtctccatgagaagctgcaacagcttggatgtatgggcgttttgggaactgtg
gccaattttctgtccaacagtccggcaacacaggcttgcagtgatctgattggtcaatta
agtgacttcatgaagaagtggaaaattattactaatttcaataaacccaccatggacata
agtgtgaataagcaggagtggggcaagttcagttcccagttcctgaccagccaatggcag
gtggtgcagctcgtgttggacaggagttgtggaccctgtcttgacatccaagagttactg
cccctggcacgggaagccctcaccgtaggggtggaggaaactgctattgttgtcttaaag
tgcctcaagctggccatttcaaagaacactgttggtgaagaagctctctgtgacattctg
gatgggagctggatgtgcctgcagggggcccgtcgcaccatcacgttctgggatgtactg
gatgccttcacctgccttgccttccaccctgccttgcttgtaagccccaaaaactcacct
gtcatcgccaaactaaacatttatgcagagggtttgctagagctgggccaggacaagaac
ggtgtggtgaacgcgatgtgcgaccagctgtacgcgggcctcactggacctggcatgata
atcaatgccagcaagtttgtcccgctcatcgtccagctttgcatgtttggcaacctcgtc
cagaggtgtgtcaggcaggtgtatgatatttgtgcagccctggagatgacccgagaacac
tgcccagacaacccacgactcaacatagtgaagaatgaagacattgaggtaaaggtgaag
gtcatctccctgctgtgtcaccttgaccccagtgacccttcccactgccacctagcaacc
agcgttgtcaaggagtgtctgaagaagtatgttgctgtgtctaagggctctgctaaccgg
ttttctaacagcctcgttcaccgtcaaagacatcgcctcatacagactgtgctgctcctc
caaggtcttgtaaccaaggattatgtagatgagctttgggcagagatgtgggtgagtctg
gaggtggagacccagccatctgtccgccacattctcgagtgggtcataatctgggctctt
cacagacaccagcacctgcgactacaactctggagcatctttgacaagtaccgtaacacc
aaacacctgaccatgagctcacttctgtgcattgtaatacatctgggacccaaactgccc
aaggaagagcaggaggtgttctacaggcaagccctgggtaatgtgttaccgtggtgcatg
gcacaccactttcagacacgactctactcccaggctgtcctctccaagctgtgggcccag
gctggtcgcctcgggctcacagccatacacacagccaaccccatcctccagaccatcgta
gacttcaaccaggagaacaggaattctacgaaaaatgtcagaaaactgctggacagtttt
ttcttcaagttcctagacttcaaagatgatttttcactcgagacattgtataaggtgatg
ccccagatgacggggttgtcagaagaggactggattgccccggagttgttccccatgacg
tgcccagcctgggccttagggagtggccccaccttcatcaacatccgtaacccccctaac
cagtttgacaagtgtgatccttcactgtggaaatacacaaccctgaagttggctgaggca
gaggttgaggagggtggcggggagcgggacgttcagaagaagataatgccatggcgacag
atgctgctggaggaggaggttgtgtctgaggtcgatcacggagtcaaggttggccctact
gatgggctggttgttgttacgtccctcattaacaaggttcccaacctgggaggattgtgt
cgaaccagtgagatatttggtgtgtctgagtatgtgttggggaagctacagtatgtcgag
gacacaagcttccagggcctcagtgtcactgcccacaaatggatccccatcactgaggtg
cacgagaccgacctgagtgattacctgcagcagagaagacaggctggctacacccttgtt
ggcgtggagcagacggcaaacagtgtctccctcacagactacacattcccaacaaaaaca
ctcttgcttctaggtaacgagaaggagggaatccctgtggatctaatctcacagctggac
gtgtgtgtggagatcccccaacaaggcgtcatacgctccctgaatgtgcatgtcagcggg
gcaatactcatctgggagtatcgccgccagcaactcatgaaggaaacatcatcatcctca
tga
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integrated database retrieval system
