Mya arenaria (softshell): 128209623
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Entry
128209623 CDS
T09995
Name
(RefSeq) AP-5 complex subunit zeta-1-like isoform X1
KO
K19025
AP-5 complex subunit zeta-1
Organism
maea
Mya arenaria (softshell)
Pathway
maea04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
128209623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maea03400
]
128209623
DNA repair and recombination proteins [BR:
maea03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
128209623
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_AP5Z1_C
TPR_AP5Z1
SPG48
Syntaxin_R9BP
Motif
Other DBs
NCBI-GeneID:
128209623
NCBI-ProteinID:
XP_052769698
LinkDB
All DBs
Position
2:complement(58500512..58516033)
Genome browser
AA seq
965 aa
AA seq
DB search
MSLTLIDKLHSQARKATDEDVVKICTSLVSVFCLPEKSAETMALLRQLFFILQAKDSNTS
LPSPLVIQMIQSVTSRDQGKLKECVLCQRILQELLPLDQKFDNDLGKIRDKIPSPWHLQM
FKDTECIAKVYSKAIRWLKAQDLEFEIQRRLFTFLVGISLLHSPLLTQEKVLSVNDVLGG
WLMNAGLYQAPNPYSSNPFRRNQNNLVTEVDGSTSNNFFTVLSIGQYYTDDQLVNIYSFS
MLYQWIEHSYQALLDNDLVSTDNDPDIDSSEMDDELQQYRSQPQRIRSGSRSSLVSRSTA
GGTASPSSTSSLEKQAIFRTSSAEVKQLPRSVTPSDLRKAYSLEQKDTLSESLSSVGSTG
FAGRGSRVTTPDSIEDDDEPSISDIVTRDTTLNASEKREITQHGQTGSTPSKERAMTPVE
LLSPHDVGIDKGEGEEKRNVVKKAFGTLLGRTIDYCFRIIDQCDRKPKVQEDVELQNACR
LETVKLLDLVCKIDPAQIPRTFRELKRLVTMVTSDDNNPKLLIVILQFLLNHSKAVAYDP
QQELRTLFHRVLSRKFTLTAIAFDIVMFTLDNLESLTHDYNIMATYFPNLFKVLEKKKSL
LILAWNPHTYVGDFLDTVPAMMSLGTSLEVFHTIIDLPCMTVALYVEERSKSLDLTTMPS
PSEEEPTSAIEAFKNALFRPMFNFFTRAEGGHGDTINRLDKFHSSIADLMEHSRVLVCYQ
AAPVLLRCWFTVILENVESDFVSALLSVLIERTGLIYGIPEYKQDVRRIITENLVLLLKK
FPETVVRQRAEIGDFLSNTSNILGREAFFNQLVWAVGEFLSTAYSPDCSAEVVGQMYETL
ELLTYEVIGVTGSTPAASAPYSVQVVSYLMSTLAKLASRCQDLIPRAILCLTKVARQHRS
DVVATEDQEILFTKAQELINLLKMPNFASVILNPPPTLETDRVHEDNSSLATLLRFTHRL
VAPTV
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgacattaatagataaactgcattcgcaagcaagaaaagcaactgatgaggat
gtggttaaaatatgcacaagccttgtgtcggtgttctgcttaccagagaagtcagcagaa
accatggctcttttgcggcaactttttttcatcttacaagcaaaagacagcaacacaagt
ttgccttcacctttggtcatacagatgatccagtctgtgacctccagggatcaaggcaag
cttaaagagtgtgtgctttgtcagaggattttacaggagttactgccccttgaccagaag
tttgacaatgacctgggaaaaatcagggataagatcccaagtccctggcatctacagatg
tttaaggatacagagtgtatagctaaagtctactcaaaggcaattaggtggttgaaggcc
caggacttggagtttgagattcagagacgtctgtttacattcctggtgggcatatcctta
ctgcactcacccctccttacacaggaaaaggtactctctgtgaatgatgtgctagggggc
tggttgatgaatgcggggctttaccaggctcccaatccttactcctccaatccattccgt
cgcaaccagaacaaccttgtcacagaggtggatggatcaaccagcaacaacttcttcact
gtactcagcataggtcagtattacacggatgaccagcttgtaaacatatacagcttttcc
atgctatatcagtggatagagcacagttaccaggctttacttgacaatgaccttgtatcc
actgacaatgaccctgacatagactcaagtgagatggatgatgaacttcagcagtacagg
tcccagccacagcgcatcagatcaggatcaaggtcaagcttggtgtcaaggtcaacagca
ggtggaacagcatcaccaagctctacatctagtttagagaagcaggctatatttagaact
tcatcagcagaagtaaaacaattgcctagatcagtgacaccctctgacctccgaaaggca
tattccttagagcaaaaagacaccctctctgaatcactgagttcagttggatccacaggc
tttgcaggtagaggatcaagagtgacaacacctgactccattgaagatgatgatgaaccc
agcatttctgacattgttacaagagataccactttgaatgcctcagagaaaagggagatc
actcaacatggacagactggttccacaccatctaaagagagggccatgactcctgttgag
ctgcttagtccacatgatgttggcattgacaagggagagggtgaagagaagaggaatgtt
gtaaagaaggcgtttgggacattgcttgggaggaccattgactactgcttcagaatcatt
gaccagtgtgatagaaagccaaaagtgcaggaggatgttgaactgcaaaatgcttgtcgg
ttggagacggtcaagttgctagaccttgtatgcaagatagacccagcccagattcctcgc
acattccgcgagctcaagaggctggttaccatggtaacctcagatgacaacaacccaaag
cttctcattgtcatccttcagtttcttcttaatcatagtaaggcagtggcatatgacccc
cagcaggagttacgtaccctgttccacagagtgctgtcccgaaagttcaccttgacagca
atcgcgttcgacatcgtcatgttcacccttgacaacctggagtcgctcacacatgactac
aacatcatggctacatacttcccaaacttgttcaaggttttagaaaaaaagaaatcttta
ctgatccttgcctggaaccctcacacctatgttggggacttcctggatactgtgccagca
atgatgtcactgggcacatcgctggaagtcttccacaccattatagatctcccttgcatg
acagtggctctgtacgttgaggaacggtctaagtctctggatctcaccactatgccttct
ccaagtgaggaagagcctacttctgccatagaagccttcaagaatgctctgttcagacca
atgttcaacttcttcacaagggcagaaggtggccatggagataccattaacagacttgac
aagttccacagttctattgctgacttaatggagcattcacgtgtgctggtgtgctaccag
gcagctcccgtactcctcaggtgttggttcactgtgatcctggaaaatgttgagagtgac
tttgtgtctgccctgctgtcggtgctgatagagagaactgggctgatatacggtatccct
gagtacaaacaggacgttcgtaggataataacagaaaacttggtgctgttgttgaagaag
tttccagaaactgtagtcagacagcgagccgagattggggactttctctccaacaccagc
aacattctgggcagggaagcttttttcaatcagctggtgtgggcagttggtgagttcctg
tccacagcatacagccctgactgcagtgcagaggtcgtaggtcagatgtatgagaccctg
gagttgcttacatacgaggtcattggggtcacagggtcaacccctgccgcaagtgctccc
tacagtgtacaggttgtctcctacctcatgtctacacttgctaagcttgcaagtcgctgt
caggaccttattcctcgcgccatcctgtgccttaccaaggttgctaggcaacaccgcagt
gatgtcgtggcaacggaagaccaggaaatactcttcacaaaggctcaggaactcatcaat
ctacttaaaatgccaaactttgcatcagttattttgaatccacccccaacattggaaaca
gacagagtacacgaggacaactcttcccttgccacactgctgaggttcacccataggctt
gttgctcctacagtctag
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