Mya arenaria (softshell): 128209680
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Entry
128209680 CDS
T09995
Name
(RefSeq) tRNA pseudouridine synthase Pus10-like isoform X1
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
maea03016
]
128209680
Enzymes [BR:
maea01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
128209680
Transfer RNA biogenesis [BR:
maea03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
128209680
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
VMAP-M5
Motif
Other DBs
NCBI-GeneID:
128209680
NCBI-ProteinID:
XP_052769785
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All DBs
Position
11:12987254..13005173
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AA seq
580 aa
AA seq
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MFTSEKALLGEIANELSSCGCCSRCTMRYLGDKDMHTYRGNYKDMAEMVQDIRGKSSVEQ
PDIDKNGKTVDTSETTNKCDIDSQKSVSNSTNTPMETDDSSNCKTDSAFELNGNGEDCDT
ADGSKSNTQSHSSNTSSACVICLGILEQFAEEKFLNKMKEDIDLEGFKYKEYMCSLMVPV
CIILRERAILLHLKEKFRTVYGDKTDMDIAPIKDVWKWRNGPLLTDLLGAPFSPKSMFDI
TMTFDYTESNKECTFLLSSSCSEMFVKRKHDRRFRKKLAQSLYTRANVGKALDKLSDDEF
RKSYQCPPLAPKAAISCDIKCQNENVFVAGRYNKYSRELSQTPWLIDGVRRSESSVEELL
CGPINKHFRPDEQKFSSSGREDVDVRMLGNGRPFVLELINPRCRNFSSEQMAKMQQDINT
STEDIKCRDLQIVPKEETEVLKQGEIDKVKWYRALCWSEQPVSQQHLDTLNSTKELKILQ
KTPIRVLHRRPLATRDKLIHSMSATRVDDTHFSVDLSTQAGTYIKEFVHGDLGRTRPNLS
IILGIDVDILDLDVTAIELDWPKAVDQDREQELQKPQTDT
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtttacatcagagaaagcattgttgggggagatagcaaatgagttatccagttgtggt
tgttgttcgaggtgtaccatgcgataccttggtgacaaagacatgcacacatacagaggc
aactacaaggatatggctgaaatggtgcaggacatcagaggcaaatcttctgtcgagcag
ccagatatagataaaaatgggaaaacagttgacactagtgaaactacaaataaatgtgac
atagactctcagaaaagtgtttccaattcaactaacacaccaatggagacagatgacagt
tctaactgtaaaactgacagtgcttttgagctaaatggtaatggtgaagactgtgatacc
gcagatggcagtaaatcaaatacacaaagccactcttcaaataccagttctgcctgtgtg
atatgtctaggaatcctggagcagtttgcagaggagaaatttctcaataagatgaaagag
gatattgacctggagggtttcaagtacaaagagtacatgtgttccctgatggttccagtg
tgcatcatactaagggagcgtgcaatattgctgcatttgaaagagaagtttaggacagtt
tatggtgataagacagacatggacatagcccccattaaggatgtatggaagtggaggaac
ggtcctctcctcactgatctgctaggcgctcctttcagtccaaagagcatgtttgatatc
acaatgacatttgactacacggagtcaaacaaggagtgcacttttctcctgagttccagc
tgcagtgagatgtttgtgaagcgcaaacatgacaggcgcttccgtaagaagctggcccag
tccctctacacacgagccaatgttggcaaggccttagacaaactctcagatgacgagttc
aggaagagctaccagtgtcctccacttgcgcccaaagcagcgatctcctgtgatatcaag
tgccagaatgaaaatgtgtttgttgcaggtcgttacaacaagtacagtcgtgagttaagc
cagaccccgtggttgatagacggtgttcggcgatccgagtcttctgtggaggagctgctt
tgtggaccaatcaacaagcacttcaggccagatgaacagaagttttcatcctcaggccgt
gaagacgtggatgtgcgaatgttgggaaatggtcggccgtttgtgttggagctgattaac
cctcgatgtcgaaacttctcctcagaacaaatggccaagatgcagcaggacataaatacc
tcaactgaagacatcaaatgcagagatcttcagattgtacccaaggaggagactgaagta
ttgaaacagggtgaaatagacaaggtgaagtggtacagggccctctgctggtctgaacag
cctgtctcccaacaacatctagatacacttaacagcaccaaggaattgaagatattgcag
aagacaccaatacgcgtcctacacagacggcctctagctacgcgagacaagctcattcac
agcatgtcagcgacacgtgtggatgacacacactttagtgtagacctctccacccaggct
ggaacctacatcaaggagtttgtgcacggggacctgggtcgcacgagaccaaacctttcc
atcatccttggcattgatgttgatatactggacctggatgtaacggctattgaacttgat
tggccaaaggcagtggaccaggaccgagaacaagaattgcaaaaaccacagacagatact
tga
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