Mya arenaria (softshell): 128209876
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Entry
128209876 CDS
T09995
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
maea
Mya arenaria (softshell)
Pathway
maea03013
Nucleocytoplasmic transport
maea03015
mRNA surveillance pathway
maea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128209876
09122 Translation
03013 Nucleocytoplasmic transport
128209876
03015 mRNA surveillance pathway
128209876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128209876
03041 Spliceosome [BR:
maea03041
]
128209876
03009 Ribosome biogenesis [BR:
maea03009
]
128209876
03012 Translation factors [BR:
maea03012
]
128209876
Enzymes [BR:
maea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128209876
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
128209876
mRNA cycle factors
Stress granule specific factors
128209876
Spliceosome [BR:
maea03041
]
Complex C
Other components
EJC/TREX
128209876
Ribosome biogenesis [BR:
maea03009
]
Eukaryotic type
90S particles
Helicases
128209876
Translation factors [BR:
maea03012
]
Eukaryotic type
Initiation factors
eIF-4
128209876
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
Utp25_C
UvrD-helicase
TniB
Motif
Other DBs
NCBI-GeneID:
128209876
NCBI-ProteinID:
XP_052770095
LinkDB
All DBs
Position
11:complement(36583951..36612386)
Genome browser
AA seq
398 aa
AA seq
DB search
MARRVLADDLKTVEFETSEDVDVTPTFDSMGLREELLRGVYAYGFEKPSAIQQRSIKPIV
KGRDVIAQAQSGTGKTATFSISVLQCLDTQVRETQALILSPTRELATQIQKVILALGDYM
NVQCHACIGGTNIGEDIRKLDYGQHVISGTPGRVFDMIKRRNLRTRAIKMLILDEADEML
NKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ
FFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRDANFTVSSMHGEMKQ
QEREAIMKQFRSGASRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGR
KGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggctaggcgtgttttagccgatgatttgaagacagttgagtttgaaaccagtgaagat
gtcgacgttactccaacattcgacagcatgggtcttcgagaagagttactgcgtggggtt
tatgcttacggttttgaaaaaccatcggccattcagcagagatcaataaagccgattgta
aaaggaagagatgtcattgcccaagcccagtctggtacaggaaagactgctacattctcc
atctctgtgctgcagtgtcttgacactcaggtccgtgaaacacaggctctcatcctctca
ccaacgcgtgaacttgcaacgcagatacaaaaggtgatcttggcactgggagattacatg
aatgtgcaatgtcacgcctgtatcggaggtacaaatatcggagaagacatcaggaaactg
gactatggtcagcatgtcatctctggaacgcctggcagggtttttgacatgatcaagcgc
agaaatctgagaacaagggcaataaagatgctcattcttgatgaagcagacgaaatgctg
aacaaaggtttcaaggagcagatttacgatgtgtatcggtatctgccacccgcaacccag
gtgtgtctgatctccgccacattgccccatgagatccttgagatgacgagcaagtttatg
acagaccccatacgtatccttgtcaaacgtgatgagttgacgttggaggggatcaaacag
ttcttcgtggccgtggaacgtgaggaatggaagtttgacactctgtgcgacctctacgac
actctcaccatcacacaggccgtcatcttctgtaacaccaagaggaaggttgattggttg
acagagaagatgcgagatgccaacttcacagtgtcgtccatgcacggagagatgaagcag
caggaacgtgaagccatcatgaaacagttcagatctggggccagccgagtgttgatcacc
acagatgtgtgggcgcgaggtttagatgtccaacaggtgtcccttgtcatcaactatgac
ctgccaaacaacagagaattgtacattcacagaatcggtcgatcgggacgatttggtcga
aagggtgtggcgatcaactttgtgaagaacgatgacatcagaattctccgcgacattgaa
cagtactactccacgcagatcgatgaaatgcccatgaacgttgctgacttgatttag
DBGET
integrated database retrieval system
