Mya arenaria (softshell): 128210262
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Entry
128210262 CDS
T09995
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
maea
Mya arenaria (softshell)
Pathway
maea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128210262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128210262
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
128210262
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
128210262
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GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
128210262
NCBI-ProteinID:
XP_052770447
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All DBs
Position
12:complement(50645963..50651128)
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AA seq
197 aa
AA seq
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MSAPMICVPGQRLCREEVNISAGRGTYTRNGFIYSSLAGALLTSTSDDSKKVVEVLRGAD
ENIVPTVDALVTAKITNVNPRFCKCAIIKVGKTDLKDSFRGMIRREDVRATEKDKVEMSK
SFRPGDIVISRVISLGDSQSYLLTTAENELGVVIATSEAGASMVPVSWSKMRCPLTLQEE
HRKVAKVQPRFIEATGT
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgcccatgatttgtgtgccaggtcagagactgtgcagggaagaagtcaatatt
tctgcaggtcggggaacatataccagaaatggtttcatctattcatcacttgcgggcgca
ttgttaacttctacatctgatgacagcaagaaagtggtcgaggtattaagaggtgctgat
gagaacattgtcccgacagttgatgctcttgttactgcaaagatcaccaatgtgaatccc
agattttgcaagtgtgcaatcatcaaagttggaaagacagacctgaaagactcgttcagg
ggaatgatcagaagagaagatgtcagagccacagaaaaggacaaggtggagatgtcaaaa
agtttcaggccaggtgacatagtcatatcaagagttatttcccttggtgactctcagagt
taccttctcacaactgcagaaaacgagcttggggttgtcatagcaaccagtgaggctggt
gcaagcatggtaccggtcagttggtccaagatgcgttgtccattgactctacaggaagaa
cacaggaaggttgcaaaggtccaacccaggtttatagaagctacgggaacatag
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