Mya arenaria (softshell): 128210308
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Entry
128210308 CDS
T09995
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
maea
Mya arenaria (softshell)
Pathway
maea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128210308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128210308
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128210308
mRNA degradation factors
5'-3' decay
Lsm complex
128210308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
128210308
NCBI-ProteinID:
XP_052770535
LinkDB
All DBs
Position
12:60134013..60141204
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AA seq
132 aa
AA seq
DB search
MNYLPGTASLIEEIDKKLLVVLRDGRTLIGILRSIDQFANLVLHRTIERIHVGKKYGDIP
RGIFIVRGENVVLLGEVDVENEGNLPLEEVPIDEILEMQREEQITKQAEEDRKKKALIDR
GMQPTEYTDDMY
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgaattacttaccaggaactgcaagtttaattgaagaaattgacaagaaattgctggtt
gtattgagagatgggcgaacattgattggaattttgcgcagcattgatcagtttgctaac
ttggtactacatcgcacaattgagcggatccatgttggcaaaaagtatggagacattcca
agaggaatcttcattgtgcgcggagaaaatgttgttctgctgggagaagtggatgtagaa
aatgaaggcaatctgccattagaggaggtaccgatagatgaaattctagagatgcaacga
gaggaacaaattacaaaacaagcagaagaggaccgaaagaaaaaggccttgatcgatcgt
gggatgcaaccaacggaatatacggatgatatgtactga
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