KEGG   Mya arenaria (softshell): 128210309
Entry
128210309         CDS       T09995                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
maea  Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:maea00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:maea03036]
    128210309
   03400 DNA repair and recombination proteins [BR:maea03400]
    128210309
Chromosome and associated proteins [BR:maea03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    128210309
DNA repair and recombination proteins [BR:maea03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     128210309
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_ECM29 HEAT_EZ HEAT IFRD TIP120 QSOX_pErv V-ATPase_H_N
Other DBs
NCBI-GeneID: 128210309
NCBI-ProteinID: XP_052770536
LinkDB
Position
12:60154451..60179149
AA seq 1014 aa
MAASVASLIENYISGFDDSASKSVANDLTSGSTSLSSIVENLGPFLTNKETNVRARATRL
IADILHNIPRDFFNDKEVGLLCTYLCERLVDHHSLQPHALFGILALSKSSHLTSGAIEAI
CRTVFKEVHCQSLAQADRRTVYNLFLTLLTTRLEDVQKLGADFVYGYLQAMDTEKDPRNL
VLAFTCARVVIQNLPLGVFVEEMFEVVSCYFPIDFSPSAADPSGISKEDLIFSLRGCLAA
TPKFAQFCLPLLMEKLTSDLKSAKIDSLQTLAECAKSYGAENLYEFQTSFFSCIKKEIFL
SSDPAIEEAGLSALQSMVAAIASGITQSDRKKSLDGFVDEILNDCKGHLLQPELMLMLST
GRILQAVALGSELACAQIVRSAVPLLVEAYNKHTQTTPKHNVIIVLNGFLGVTASFSYTN
KNPNPMISAYKTHLLDLYKRSVEDENNSIQLLGIRGYRSISMATGDNLTTEDISNIAQQL
VNKVVENSFEINTRHECCEVLQLIMSQYPDIAETVVYPRFFNILHNEPMSVDGSSQLDKT
GVLEVLPPITRGQMCLKLVTDVLYKMLNNPDFIELYCPLSKCLAKLSEACSPDTDCTNTL
TAGVRIVHDLVTSKCRCARWYQALCGDLVLANLAEFIRHEACHWTESKILEMQSLFIDSY
LPSTTCDTEYKGDDLDLFKGQPASFSPLQASCDAVFVCLLTPVMCSSPPQFLSKTARLSD
LLDRLAALVFEDLSANAHVHVCKCLAGMLNKLQQGESLQTVLCTLKDKIQAKLENESDTH
SVVTLSWVTKALVLRGHSMAGDFVSMLIQTLSSTANGRQAARGFQTVLSMYEEVLNRQMH
ASVRMMYRQRFFLEHLGPIVTAYGSALQESKKNYLLALSYMMQGLDKQVIIPEMNKIYPL
LIQSLLQDDLDLQLVTMETLSELLCSAPSVVAKQIDSLVPQLLSLTTYKPSMKVRISALK
CLKELTTLPSHVLVPYQNKVCRALVPVLDDMKRLVRAQAVVARQEWILLDSDKQ
NT seq 3045 nt   +upstreamnt  +downstreamnt
atggcagcctccgtagcaagtctcatcgaaaattatatatctggtttcgacgattctgcc
tcgaaatcagtggcaaatgacttgacaagtggcagcacctctctgtcatccattgtggag
aatcttggaccattcctgacaaataaggaaacaaatgtgcgagcacgggccactcgactg
atcgctgacattcttcataacatcccaagggacttctttaatgacaaagaagttggcttg
ttgtgtacatacttgtgtgagagactggtagaccatcactcactgcagccacacgctctc
tttgggattctggctctgagcaagtcttcccacctgaccagtggtgctatagaggccata
tgcaggacagtcttcaaggaggtacactgtcagtccctagcccaggcggacagaaggaca
gtctacaacctcttccttactcttcttacaacaaggcttgaagatgttcaaaagcttgga
gctgactttgtgtatggctacctacaagccatggacacagagaaagatccccgcaacctt
gtgctggctttcacatgtgcacgcgttgttatccagaacttgcctcttggagtttttgta
gaagagatgtttgaagttgtctcctgttactttccgatcgatttctctcctagcgcagca
gacccaagtgggatcagtaaggaggacctgattttcagtttgcgaggatgtcttgcagct
acaccaaaatttgctcagttttgccttcctttgttaatggagaaactcacctccgatttg
aagagcgccaaaattgattccctgcagacattagctgaatgtgccaagtcatacggagca
gaaaacctctatgagtttcagacatctttcttcagttgcataaaaaaagagatattcctg
tccagtgacccagctattgaggaggctggtttgtctgccttacaaagcatggtagctgcg
attgccagtggaatcacccagagtgacagaaagaaaagtctggatggatttgttgatgaa
atattgaacgattgtaaagggcacctgctacagcctgagttgatgttgatgttgtcaacg
ggcagaattctccaagcagtagctcttggctctgagcttgcctgtgcacagattgtcagg
agtgcagtccccttgctggtcgaggcgtataataaacatacacaaacaacgcctaagcat
aatgttataattgtgttgaatggtttccttggtgttacagcttccttttcatacacaaat
aaaaacccaaatccaatgatatccgcctacaaaacccatctactggacttatataaacgg
tcagtagaagatgaaaacaacagtatacagttgctagggatccgtggttacagatctatt
tcaatggcaactggtgataacttgacaacagaagatatctccaacattgctcagcaactg
gtgaataaagttgtggagaactcctttgagattaataccaggcatgagtgttgcgaagtc
ctacagctgataatgtcacagtatccagacattgccgagacggtggtttacccaagattc
tttaacattctacataatgagcccatgtcagttgatgggtcaagccaactggacaagaca
ggggttctagaagtgttgccgccaatcacacgtggtcagatgtgcctcaaacttgtaacg
gatgttctttacaagatgcttaacaaccctgatttcatagagctgtactgtcctttgagc
aagtgcctcgccaagttgtccgaagcatgttcacctgacaccgactgcacaaatactctc
acagcaggagttagaattgtccacgaccttgtgacctctaagtgtagatgcgcacgatgg
tatcaggcactttgtggagacctggttttagcaaatctggccgagtttatacgacatgag
gcttgccattggaccgagagcaaaatcttagaaatgcagtccctgttcatagacagctat
ttaccttcaacaacctgtgatactgaatacaaaggtgatgaccttgacctgttcaagggt
caaccagcaagtttttctcctttacaagctagctgtgatgcggtgttcgtctgtttgctg
acaccagtgatgtgctcaagtccaccacagtttttatcaaagactgccaggttgtcagac
ttgttggatagactagcagctctggtgtttgaggatttgtccgctaatgctcatgtccat
gtgtgtaaatgcctcgcaggaatgctcaataaactacagcaaggggaatctcttcagaca
gtcttgtgtactctgaaagacaagatacaggctaaactggaaaatgagagtgacactcac
tctgtggtaactctgtcgtgggtcacaaaggcgctggtgctcaggggtcatagcatggct
ggagactttgtttccatgttaatccagacgttgtcatccacagctaatggccgacaggca
gcaaggggttttcaaactgtcctgtcaatgtatgaagaggttttgaatcgccaaatgcat
gcatctgtccgcatgatgtacagacagagattcttcctggaacatctgggtccaattgtc
acagcttatggtagtgctttacaagaaagcaagaaaaactacctacttgccctttcctat
atgatgcaaggcctggataagcaggtcatcattcctgaaatgaacaagatctaccctctt
ctgatccagtctttgctacaagatgaccttgaccttcagctggttaccatggaaacattg
agtgagctgctgtgcagtgctccttctgttgttgctaagcagattgattccctagtgcca
cagctgctcagccttactacctacaaaccctccatgaaagtgagaatatctgccttgaaa
tgtttgaaagagttgaccacgctgccttcacacgttctggttccctaccagaacaaggtt
tgccgtgcgctggttcctgttttggatgacatgaaacgactggtgagagcacaagccgtg
gtagcgagacaggaatggattttgttggattcggacaagcagtag

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