Mya arenaria (softshell): 128210872
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Entry
128210872 CDS
T09995
Name
(RefSeq) uncharacterized protein LOC128210872 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
maea03041
]
128210872
Enzymes [BR:
maea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128210872
Spliceosome [BR:
maea03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
128210872
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
128210872
NCBI-ProteinID:
XP_052771189
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All DBs
Position
2:complement(22805750..22813676)
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AA seq
730 aa
AA seq
DB search
MSHRDRMNGSSGRSDRKIGLGSHGLPSSFGAGRRDDRGRGGFGGGRGGGGFGGGGFGGGG
RGGKGSQPGQSLRRPNWDSMRLSKFEKNFYAEHPKVTNRSPMEIQAFFETHQITQHGNNI
PKPILTFEEANFPDYVINNIHTQSWTAPTPIQSVGWPIALSGNDCVGIAQTGSGKTAAFI
LPSIVHINNQPYLERGDGPICLVLVPTRELAQQVQQICNDFGTSSSIRNACVYGGSPKGP
QLRDLERGAEICIATPGRLIDFLEMGKMNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI
RPDRQTLMWSATWPKEVRQLAEEFLTNYIQTNVGALQIHANHNILQIIDVCQETEKDLKL
MKLLEEIMQEKENKTLMFVETKRKADELARRMKRDGWPVLCIHGDKSQPERDWVLQEFKH
GKTPLLIATDVASRGLDVEDIKFVINYDYPNSSEDYVHRIGRTGRSNHSGTAYTFFTPNN
VKQARDLVEVLQEAKQVVNPKLIQLADSARGFGRGRFRGGRSDRDRGSRFGDRDRFGGRG
GARGGSRFDSDRSGGSRFDSGRSDRGNSDGGSSRFGSNSSGVGEIKGFGNTSGGGQSSRG
GGAGPSSMGRGTGSSVRGGFNQGSGSYGNNQQKGFGNTQGSQFGNPQQNSFGNTQPNANQ
FGGGNAAHSGGRGGYPSGPPPSLMNGSFQAPPPQPNFGQPPPQPPQQNPMMYNNWMNAGP
SAPPPPPPRQ
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacagggaccgaatgaatggatcatctggaagatctgacagaaaaatcggtctt
ggctcacatggactacctagctcttttggcgctggaaggcgagatgaccggggccgtggg
ggtttcggtggtggtcgaggcggtgggggatttggcggtggtggtttcggtggtggcggg
cgaggtgggaagggatcccagccaggacagtccctcaggaggccaaattgggatagcatg
agactatctaagtttgagaagaatttctacgccgaacatccaaaggtcacaaacagatct
ccaatggagatacaagctttctttgaaacacatcagatcacgcagcatggaaacaatata
cctaagcctatacttacatttgaagaggcaaacttcccagattatgtgatcaacaacatt
cacacacagtcctggaccgctccaacacccatacagtcagttggttggccaattgctctc
tcgggtaacgattgcgttggcatagcacagaccggatctggaaaaacagctgctttcata
ctaccatcaatcgttcatatcaacaatcaaccttacctagagcgaggggatggacctatc
tgtttggttcttgtacccacaagagagttggcccaacaggtgcaacagatctgtaatgac
tttggaacatcctccagcatcagaaatgcctgtgtatatggtggctcaccaaagggccca
cagcttcgagacttggaacgaggagcagagatctgtatagccacccctggacgtttaata
gactttttagagatgggaaagatgaatctacgtcgatgtacatatctagtcctggatgag
gctgacagaatgttggatatgggatttgaacctcaaattagaaagatcatagagcaaatc
agacctgatagacagaccctcatgtggagtgctacctggccaaaagaggttcgtcagctg
gctgaagagttcctcaccaactatatacaaacgaatgttggagccctacagatccacgcc
aaccacaacattctccagatcatcgatgtctgtcaggagacagaaaaagacctcaagttg
atgaaactgttggaagagatcatgcaagagaaggagaacaagacactcatgtttgtggag
acaaagcgcaaggctgatgagctagctaggaggatgaagagggatgggtggccggtattg
tgcattcatggtgacaaatcacaaccagaaagagattgggttctacaagagtttaaacat
gggaagactccattacttatagctacagacgtcgcatcacgtggattagatgtggaagac
attaaatttgtcatcaactatgactacccaaattcgtcagaggactatgtgcaccgtata
ggacgtacaggcaggagtaaccacagtggtacagcgtatacattcttcacacccaacaat
gtaaaacaggcaagggatctcgttgaagtgctacaggaggcgaagcaggttgtcaatccc
aaactcatccagcttgctgatagcgccaggggctttggaagaggacgtttccgcggaggt
agaagtgaccgtgaccggggctccaggtttggagaccgggatcggtttggaggtcgcgga
ggggccaggggaggatcgagatttgacagtgatcgcagtggtggaagccggtttgacagc
ggccgtagtgatcggggcaatagcgacggtggatcttctcgatttggtagtaacagcagt
ggggttggcgagattaagggttttggaaacaccagtggtgggggtcagtctagtcgtggt
ggtggggctggaccctccagtatggggcggggcacaggaagctctgtacgtgggggcttt
aatcaggggtcaggatcctacggcaacaaccagcaaaaaggctttggaaatacccagggt
agccagtttggtaaccctcaacagaactcgtttggaaatactcagccaaatgctaatcaa
tttggaggtggcaatgcggctcatagtggtggccgtggcggctacccaagtggtccccct
ccttctctcatgaatggcagcttccaggctcctcccccccaacctaactttggccagcct
cctccgcagcctccccaacagaacccaatgatgtacaacaactggatgaatgccgggcct
agtgcccctcctccaccccctccgaggcaataa
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