Mya arenaria (softshell): 128211181
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Entry
128211181 CDS
T09995
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
maea03009
]
128211181
Enzymes [BR:
maea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128211181
Ribosome biogenesis [BR:
maea03009
]
Eukaryotic type
Pre-60S particles
Helicases
128211181
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
128211181
NCBI-ProteinID:
XP_052771596
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All DBs
Position
12:complement(18055041..18101072)
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AA seq
562 aa
AA seq
DB search
MSDEEDSKLLEFHEMGLDDRLLKAISMLGWSSPTPIQERAIPLALEGKDILSQARTGSGK
TGAFAIPVIQKVLISKQTATEQCVKAVIMTPTKELCSQAYRNIQELTSCCSREVKCVDVS
PQVPLPSQRPMLSEKPDIVVGTPSRLLAHIQAGNLDVSESLEMIVIDEADLVFSFGYEDN
VKAILNHMPKIYQAFLMSATLGDDVKALKKMVLHNAVILKLNETNLPQTSQLTQYHIKCA
EEDKFALVYALLKLRLVRGKTILFVNNVDRCYKLRLFLEQFGIPACVLNSELPVNSRCHI
VSQFNNGLYDYIIASDENLLQDPRNKPQQDNTQKRGRKKDQEFGVSRGLDFQNVSNVINF
DFPTTVQAYIHRVGRTARGENKGTALSFVSIKEMPLLENVEAELAGHEGHESAVFKPYQF
KMEEIEGFKYRAKDAMAAVTRVAIREARLKEIKQEILNSQKLKSHFEDNPRDLQILRHDK
NLHTVKSQPHMKHVPDYLIPATLQRLAGKGRGSKKSRRGNARKQGPTEGQMKFKKRKSDP
LKSLKFEGLGMKKKRKTGRAKK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgaagaagatagtaaattacttgagtttcatgaaatgggtttagatgacaga
ctgttaaaggccatatccatgctgggctggtcgagtccaactccaatacaggagagagcc
atacctctggcactggaggggaaggacatactgtcccaggctaggacagggtcggggaag
acaggggcatttgccataccagttatacagaaagtcctcatctctaaacagacagcaaca
gagcagtgtgttaaggcagtaattatgaccccaacaaaggagctatgtagtcaggcctac
agaaatatacaggagctgacatcatgctgttcccgggaggtgaagtgtgtcgatgtttct
cctcaggtgcccttgccatcacagaggccaatgttgtcagagaaaccagatatcgtagtt
ggtaccccgtctcgcctgttggcccatatacaagcagggaaccttgatgtcagcgaatca
ctagagatgatcgtcattgacgaggctgacctggttttttcattcggatatgaagataac
gtgaaagctatactaaatcacatgccaaagatataccaggcattcctgatgtctgcaaca
ctaggggatgatgttaaggctctcaagaagatggtgctacacaatgctgtgatactgaag
ttaaatgaaacaaatcttccgcagacatcccagcttactcaatatcacataaaatgtgca
gaggaagacaaatttgccttggtatacgcgttgttaaagcttcgactggtccgagggaaa
actatcctgtttgtgaacaacgttgacaggtgttacaagttacgcctgtttcttgagcag
ttcgggattccagcctgtgttctcaactctgagttgcctgtaaattcaaggtgccacatt
gtgagccagtttaacaacggcctgtatgattacattattgccagtgacgagaacctccta
caagaccccagaaataaaccacagcaagataacacacagaaacgtgggcgtaagaaggat
caggagtttggcgtgtcaaggggcctggacttccagaatgtgtctaacgtgatcaacttc
gactttccaaccaccgtacaggcgtacattcacagagtcgggcggacggcaaggggagaa
aacaaggggactgcactatcgtttgtttccattaaggagatgccattgttggaaaatgtc
gaagcagaactggccgggcatgaaggccatgagtctgccgtattcaagccgtaccagttc
aagatggaggagattgagggcttcaagtaccgagcaaaggacgcgatggcggctgttaca
cgagtggcgatcagggaggctcgactcaaggaaattaaacaggagatccttaactcacag
aaacttaagagtcattttgaggacaacccacgggacctgcagattcttcgacatgacaag
aacctccacactgtcaagtcccagccgcacatgaaacatgttccagactatcttattccg
gccacactacagaggttggcggggaaggggcgaggcagtaaaaagtcgcgccggggaaat
gcacggaaacagggacccacagagggtcaaatgaagttcaagaagcggaagtctgacccc
ctgaagagtttgaagtttgaaggacttggcatgaaaaagaagaggaaaactggaagagcc
aagaaatga
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