Mya arenaria (softshell): 128211546
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Entry
128211546 CDS
T09995
Name
(RefSeq) pseudouridylate synthase 1 homolog
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
maea03016
]
128211546
Enzymes [BR:
maea01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
128211546
Transfer RNA biogenesis [BR:
maea03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
128211546
Prokaryotic type
128211546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
128211546
NCBI-ProteinID:
XP_052772417
LinkDB
All DBs
Position
12:54310926..54334649
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AA seq
502 aa
AA seq
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MIKRVFKRLQEYIKVSMSVIKEAQQLPGPGDKRGADGTKKEGSDFREERKRKVALVIAYS
GKGYFGLQMNSGFKTIEGEVLRALLDVGVIPQDHYDSVWKMSFQRAARTDKGVSAAGNVL
SLKIGVNMPDLLDRINEKLPEEIRAMDIIRTTKGFNSKNHCTGRTYNYLLPTLAFSPVEE
NATFAYRTNLETIEKVNEILEKYKGTHNFHNFTSGVKPHEATAYRHMWNVECGLPFVRDG
VEFCVLSVSGQSFMMHQIRKMVGLMIAIIRGFAGENAVERAWESEKMDIPKAPGLGLFLD
RLHYSQYNTKFANDGSHPKIEFSKIKDKLQAFKEEKIFTEIIKTEVEENSMIQWLGTLHL
HTCEDVGPDIIGRRDFKERVEEHREQAEAEANDSDNEHTETKNTKESSETVSESQVVKET
TEGTATGHSKANDCTSDQGQVRTNSATVNQSSDCEGHVIDTTNQNTDCEDHVTSVKDKCE
AIDDTSKEDKDGLKEIVKSVSS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgattaagagagtatttaaaagacttcaagagtacattaaagtctccatgtcagtcatc
aaagaggctcagcagctgcctggtccaggggacaaaagaggtgcagatggaaccaagaag
gaagggagcgatttccgtgaagagaggaagagaaaagtagctctagtgattgcctacagc
ggcaagggatattttggccttcaaatgaactcaggattcaagacaatagagggcgaggtg
ttgagagctctgttggatgttggagtcataccgcaggatcactatgacagcgtttggaag
atgtcctttcagcgggctgcaaggacagacaagggggtatcagcagctgggaatgttctg
tctttaaagataggtgtaaacatgcctgaccttttggacaggatcaacgagaaactgcca
gaggagatacgtgctatggatattatccgtacaacgaaaggctttaacagtaagaaccat
tgtacaggacggacatacaactaccttctgcccaccctggcgttctctcccgtagaagag
aatgcgacctttgcgtaccgtaccaaccttgaaaccatagagaaggttaacgagattctg
gagaagtacaagggcactcacaacttccacaatttcacatcaggagttaagccacatgag
gccacagcatacagacatatgtggaatgttgagtgtggcctgccatttgtacgagacggt
gtggagttttgcgtcctctcagtcagcggacagagcttcatgatgcaccagatcaggaag
atggtcggtctcatgatagcgatcatccgaggctttgcaggtgagaatgccgtagagagg
gcttgggagagtgaaaagatggacattccaaaggcaccaggacttggtctgtttctggat
aggctccactacagtcagtacaacaccaagtttgccaatgacggcagtcatcccaagata
gaattctctaaaatcaaggataagctgcaggcatttaaggaagaaaagattttcacagaa
attataaagacagaagtagaagaaaatagtatgatacagtggctgggcacattacacctg
cacacatgcgaggatgtgggcccagacatcattgggcgcagggattttaaggagagggtt
gaggaacatagggagcaagcagaagctgaagcaaatgattctgacaatgaacacactgaa
acaaagaatacgaaagaaagttctgagacagtttctgagtcacaagttgtcaaggaaacc
acagaaggtactgcaactggccacagcaaggccaatgattgtacaagtgatcagggacag
gtgcgcacaaacagtgcgacagtcaatcagagtagtgattgtgaaggtcatgtgatagat
acaaccaatcagaatactgattgtgaagatcatgtgaccagtgttaaggataaatgtgag
gcaattgatgacacttctaaggaagataaagatggtttaaaggagattgttaagtctgtc
tcatcttag
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