Mya arenaria (softshell): 128211667
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Entry
128211667 CDS
T09995
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
maea
Mya arenaria (softshell)
Pathway
maea03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128211667
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
maea01009
]
128211667
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128211667
03036 Chromosome and associated proteins [BR:
maea03036
]
128211667
Protein phosphatases and associated proteins [BR:
maea01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
128211667
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
128211667
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
128211667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
128211667
NCBI-ProteinID:
XP_052772629
LinkDB
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Position
12:complement(69003681..69020629)
Genome browser
AA seq
488 aa
AA seq
DB search
MISPPKEKGSGFGSKGLHKIQNMLHHRPRASSLGQKDKPEKHGHVHGNGGEIQWCFSQVK
GTIEDDITEADIISCVEFNHNGELLATGDKGGRVVIFQRDGKGNPHFHARGEYNVYSTFQ
SHEPEFDYLKSLEIEEKINKIRWLQRSNPANFLLSTNDKTIKLWKVTERDKRAEGYNLKD
DAGIMRDPTSVNTLRIPSFKPMELLVEASPRRIFANAHTYHINSISVNSDQETYLSADDL
RINLWHLEVTNQSFNIVDIKPANMEELTEVITAAEFHPTECNLFVYSSSKGTIRLCDMRE
QALCDKHAKLFEEPEDPTNRSFFSEIISSISDVKFSHNGRYMVTRDYLSVKVWDLQMDSK
PIETFQVHEYLRSKLCSLYENDCIFDKFECAWSGNDRHIMTGSYNNFFRMFDRESKRDVT
LEASRENVKPKTVLKPRKVCSGGKRKKEEISVDCLDFNRKILHAAWHPLDNILAVAATNN
LYLFSSKE
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgatttcgccaccgaaggaaaaggggtctgggtttggcagtaaggggctgcacaaaata
cagaacatgcttcatcaccggccccgggcatcgtcactcggacagaaagacaagccggag
aaacatggacacgtacatggcaatggtggggagattcagtggtgcttctcacaggttaag
ggtacaatcgaggatgatatcacagaagcggatatcatatcatgtgtagagttcaaccac
aatggagagctcttggccactggtgacaaaggagggcgtgttgtcatattccagcgcgac
ggaaaggggaatcctcatttccatgctcgtggggaatacaacgtgtacagcaccttccaa
agtcatgagccagagtttgattatcttaaaagtttagagattgaagaaaagatcaacaaa
atacgctggcttcaacgcagcaacccagctaacttcctcttgtctacaaatgacaaaaca
ataaagttgtggaaggtcacagaaagggacaagagagcggaaggctacaacctgaaggat
gatgctgggatcatgcgagatcctacctcagtcaatacactccgcatccccagcttcaaa
cccatggagctgctggtagaagctagtcctcgccgtatatttgccaatgctcacacatac
cacatcaactccatctcggtgaacagtgatcaggagacatacctgtccgctgatgatcta
cgcattaacctttggcatctagaagtcacaaatcaaagtttcaacattgtagacatcaag
ccggccaacatggaggagctaactgaggtgattacagcggccgagtttcatcccaccgag
tgtaacctgtttgtgtacagcagtagcaagggaaccatacgcctctgtgatatgcgggaa
caagcactgtgcgacaaacatgccaaactgtttgaggagcctgaagatccaacgaaccgt
agcttcttctccgagatcatatccagtatatctgatgtgaaattcagtcataacggccgt
tatatggtcaccagagactacctgtcagttaaagtctgggatctacagatggactcaaag
cccatagagacttttcaagtacacgagtacctaaggagtaaactgtgttccctttatgag
aatgactgtatatttgacaagtttgaatgtgcttggagtggaaatgataggcacataatg
actggttcatacaataactttttccgcatgttcgaccgagaatcaaagcgtgacgttaca
ctggaggccagtcgggagaacgtgaagccaaaaactgtactgaaacctcgaaaggtgtgt
agtgggggcaaacgcaagaaggaagagatcagtgtggattgtttggactttaatagaaaa
atcctacatgctgcctggcaccccttggataatattctagctgtagcagcaacaaataac
ttgtatctattttcttccaaagaatag
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