Mya arenaria (softshell): 128212100
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Entry
128212100 CDS
T09995
Name
(RefSeq) structural maintenance of chromosomes protein 3-like
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
maea03036
]
128212100
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
maea00535
]
128212100
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
128212100
Meiosis-specific proteins
Cohesin complex and associated proteins
128212100
Proteoglycans [BR:
maea00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
128212100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
CCDC39
AAA_29
Motif
Other DBs
NCBI-GeneID:
128212100
NCBI-ProteinID:
XP_052773319
LinkDB
All DBs
Position
12:complement(53005509..53029909)
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AA seq
1206 aa
AA seq
DB search
MYIKQVIIQGFRSYREQTVVEPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RQALLHEGTGPRVISAFVEVIFDNSDNRIPIDKDEVVLRRVIGSKKDQYFLDKKMVTKGD
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTKVYDERKEESKDILR
ETEGKREKINDLLKYIEERLMTLENEKEELKEYQKWDKMRRSLEYTIHDHELRDTKKKLD
ELQDKRDNSGAQSQRYRDLAQAANDKVKAINKDLRELKTRMQTVFDEKEQLQSENQELTK
QKAKLELTIKDIQDDLEGDKKAKKKSDAELSKVDEKIGRTQKSLESITPQYEALRDREEE
CTQQLATAEQRRKELYAKQGRGNQFRSREERDSWIKNELKSLNKAIKDKEEQIRKLTEDT
GQEEKRREMLETKITEVNQKVEQHKEIIETNNKSYNEMKSNKDELQNERSSLWREENHLQ
QNLVSLRDELSKKEQALRSMTGKATLNGINSVQKVLQSFRDRNIHLDLIEGYYGTLIGMF
ECDKTFFTCVEVTAGGRMFHHVVDSDRTGTAILQEMNRMKLPGEVTFMPLNRLDNRDTRY
PETNDAIPMISKLRFEDKYSPALKHVFSKTLICRSMEVATQIARTQNLDCITLDGDQVSR
RGALTGGYYDNRRSRLDLHKSKEEYAEKVNTMESQYNEHKTKLEEIEGQINNLVSEMQRM
ETRNSKNRDNYEKMKADVRLMTEELKNLQKGQPGKGRSVSNFHSSLEAMQATAMSLKEEL
GTDLLSQLNVEDQGEMDKLNDQIKNLTQQNKDSLKERIRLEGEKNKLENLLYNNLMKNRE
RILSDMQEEDVQTRQSKLENSNTSLDKVDTRLNEIKTQMKDLDDGLEKLNKEQKELQNNI
EHWKGQEKDIQEKLGDDSKELEKMTNKQSVLLRKKDECMKKIRELGSLPSDAFEKYQNLN
SKQLFKKLDQCNGELKKYSHVNKKALDQFVNFTEQKSKLIKRKEELDRAHTSIIDLMNAL
DHRKYEAIQLTFKQVSKYFSEIFKKLAPDGHAQLVMKKGDTDPGGEDDEGNQSQEVPLVE
QFTGVGIRVSFTGNRAEMRDMQQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDQALDA
QHRKAVADMIHELSKDAQFITTTFRPELLEHADKFYGVKFRNKVSHIDCVSYEEAQDFVE
DDTTHG
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgtatattaaacaggtgatcatacagggctttcggagttatcgtgagcaaacagttgta
gagccattcagcagcaaacataatgttattgttggaagaaatggatcgggaaagagtaat
ttcttttatgcgatccagtttgttttatctgatgagttcagtcacctgagaccagagcag
cgtcaggcgttattacacgagggcacaggtcccagggtcatatctgcctttgtggaagtc
atatttgacaactcagacaacagaattccgattgacaaagatgaagtggttttgcgacga
gtcattggctcgaagaaagatcagtacttcttggataagaagatggtcacgaaaggcgat
gtgatgaatttactggagagtgcaggtttctccaggagtaacccatattacattgtgaaa
cagggaaagataaaccagatggcgacagccccggactcccagcgcctgaaacttctacga
gaagtggccggcacgaaagtttatgatgaacgcaaagaggaaagtaaagacatcctcaga
gaaacagagggaaagcgtgagaagatcaatgaccttttgaagtacattgaggagcggctg
atgaccttggagaatgagaaggaggagctcaaggagtaccagaagtgggacaagatgagg
aggtccttggaatacacgatacatgaccatgagctgcgggacacaaaaaagaaactagac
gagctacaagataagagagacaactctggcgcccagtcacagaggtaccgggacctagcc
caggctgcaaatgataaagtcaaggcaattaacaaagacctccgtgagctgaagacgcga
atgcagacagtgtttgatgagaaagaacagctacagtcagagaatcaggagctcacgaaa
cagaaggcaaagcttgaactcaccataaaggacatacaggatgatctagagggggacaag
aaagccaagaaaaagtctgacgctgagttaagtaaggtagatgagaagatcgggcgcacc
cagaaatcactcgagtccattaccccccaatatgaggctctcagagatcgagaagaggaa
tgtacacaacagttggcaacagcagagcagcgtcgtaaggagctgtatgcaaagcagggt
cgggggaaccagtttcggtcacgggaggagcgcgattcttggatcaagaatgaacttaag
tcactcaacaaggccataaaagacaaggaagaacagatccgtaaattgacagaggacacc
ggtcaggaagagaagcgccgtgagatgttggagacgaaaatcactgaggtgaaccagaaa
gtggagcagcacaaggaaatcattgagacaaacaataagtcatacaacgagatgaagagc
aacaaagatgagctgcagaatgaacgcagttccctgtggagagaggagaatcatctacag
caaaatcttgtgtctctaagggatgagttgagcaagaaagagcaggcactacgctcaatg
actggcaaggctaccttgaacggtatcaatagtgtacagaaggtcctgcagtcattccga
gaccgtaacattcaccttgacctcatcgaaggctactacggcactcttatagggatgttc
gaatgtgacaagactttcttcacatgcgtggaggtcactgctgggggaaggatgtttcat
catgttgtggacagtgacaggacgggtacggccattcttcaggaaatgaaccgaatgaaa
ctccccggggaggtcacctttatgccccttaatcggctagataaccgggacaccagatat
cccgagacaaatgatgccataccaatgatcagtaagctgcgcttcgaagataagtacagc
cccgcactgaagcatgtgttctctaaaaccctgatctgccgcagcatggaagtggccaca
caaattgcccggacacagaaccttgactgcatcacacttgatggtgaccaggtgtcaagg
cgcggagccctgaccggtggatactatgacaaccgaaggtcgcgtcttgaccttcacaag
tcgaaggaggagtatgcagagaaagtcaacaccatggagtcgcagtataatgaacacaag
acaaagctggaggaaattgagggacagatcaacaaccttgtgtcagagatgcagcgtatg
gagactcggaatagtaagaaccgtgacaactatgagaagatgaaggccgatgtcaggctc
atgaccgaggaactcaagaacctccagaaaggccagcctggcaaaggtcggagtgtgtcc
aacttccacagtagccttgaggcaatgcaggcgactgccatgtcacttaaagaagagctg
ggcaccgatctcctgtcccagctgaatgtggaagaccaaggcgagatggacaaactcaat
gaccagatcaaaaacctcacgcagcagaacaaggactctctcaaggagagaatcagactt
gaaggtgagaagaacaagctggagaatctgttgtacaacaatctgatgaagaaccgagag
cggatattgtcggacatgcaggaggaggatgtccagacgaggcagagcaaactggaaaac
tccaacaccagtctcgataaagtggacaccaggcttaatgagatcaaaacacagatgaag
gacctggatgatggtttggagaaattgaacaaggaacagaaagagcttcaaaacaatatt
gaacactggaaaggtcaagaaaaagatatccaggaaaagttaggtgatgactccaaagag
ctggaaaagatgactaacaaacaatcggtgctactcagaaagaaagatgaatgtatgaag
aagattcgagaacttggctctttaccaagcgatgcctttgaaaaataccagaatctcaat
tctaaacagttgtttaagaagttagaccagtgtaatggagagttgaagaaatacagccac
gtgaacaagaaagcccttgaccagtttgttaacttcacagaacaaaagtcaaaactcatc
aagcgaaaggaggaactcgacagagctcatacatctatcattgatctcatgaatgccctg
gatcacaggaaatatgaagcaattcaacttacatttaaacaggtgtcaaagtacttcagc
gagatattcaagaagctggcaccggatggccacgctcagttggtcatgaaaaaaggggac
acagatccagggggagaggatgatgaagggaaccagtcacaggaagtgccattggtggaa
cagttcactggggttggaattagggtttcgttcactggtaaccgtgcggagatgcgagat
atgcagcagttgtccgggggtcagaaatccctcgtagccctcaccttgatctttgccatc
cagaagtgtgaccccgcccctttctacctgtttgatgagattgatcaggccctggatgca
cagcataggaaggctgtggcagatatgattcacgagctctctaaggatgcccagttcatc
acgaccacattcagacctgagttactggaacatgccgacaagttctatggtgtcaagttc
agaaacaaggtcagccatattgattgtgtgagttacgaggaggctcaagactttgttgaa
gatgataccacacatggttaa
DBGET
integrated database retrieval system
