Mya arenaria (softshell): 128212141
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Entry
128212141 CDS
T09995
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
maea03009
]
128212141
Ribosome biogenesis [BR:
maea03009
]
Eukaryotic type
90S particles
Other 90S particles
128212141
Pre-60S particles
Other pre-60S particles
128212141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
CLASP_N
TPR_CAND1
Motif
Other DBs
NCBI-GeneID:
128212141
NCBI-ProteinID:
XP_052773393
LinkDB
All DBs
Position
12:complement(37654903..37686500)
Genome browser
AA seq
1297 aa
AA seq
DB search
MKMGSKAKINSKHRVHKGKAKRWKKGHSSTSNPEKNKFREAAKNRFFNKIEGPSSLTVDA
LVKHDKSHSSTDVESMATESDQQTMGTFKTWATNWTDCTNTTFSKVHRYWSSNSALHKEI
LAVLAAVTEVIKLQGGKETETEYFAALMTALETTEEDDSTSAIVYLISLVMKRVPVAVLR
SKFSEVAKCFLDLMAKYSDGESTSLMKSLLMSLSLLLRSQEAAAWSNSSTQQIYKALLTF
VAHKKPKVRKAAHQGVCIVLKGSLFLLELNSPKHHPAASLTAKHCVQVMENAGGLGEAVD
TLHTLALLKQILPVLPLNSTKVVCETILKVMTLSNVMVTAGGMQALHSLFAAAPKPDCLS
AALNAQVINALYDYQPSENDVQPTQAWLVVMETAHINLARLDAALCLSHLPRLFSSGMLC
MLSVKPEITQAAAKMMKGVISESLGAQVDIVGSQLASGGSNTPAQKIVRALESGLGYQFH
ASWGLVLQIFAVLYKTVGKASPKAFHKSLTLMADLRDSVRFAYKGELDHAVGAAVKAMGP
REVLTAIPLQITGQSDDLDFPRSWLLPVIRDNVQETELAFFTSYFLPLAAKLRLRSLELA
DQQNVVASKTYEALQLQMWSLLPGFCTRPTDLVASFKGIAKVLGTAISERDDLRMEVMAS
LRKLITQSLSSEEARNELCRFSKNFLPILFNQYTTDPTTEKDMSKLAVLETVKCYLQVTD
KESVAIFCDKCRDKLKEEGISSYKRYALHDLLIAMLPYLEKQQLLTIFKLAEQNLQVLDK
SLQKKCYRILEEICGGKSEQTRDFVQSHLQTIQQTLLASLSSSSPSSKAPRLRCLVNIFK
LLEIPQNDFLLAVVPEAILCTKEVAERARVAAYALLVEMGNASLRWAGEDNSGGLEEFFK
MVMAGFAGSPQMISATLMALTRIMYQFKDNISSTMLESILSDVCVLLKSKSREVVQGALG
FTKVLVSSHQVTTLAPHLKTIMSSLTSMKEDCHHHFRFKAKEVYTKLVKKFGYETIYGLA
PESIRRQLVNVRKTMERAKKQKTQKDKGHDSSDDDEDDKKFARHSESIDDLLKDSDSEPE
EEDKAKKSKVKDKGQKVKKAQGGQAWLQEGGDDDITDFMDTSAAKKVMATKPVEKKQKKA
DSGFKTAPDGRLIITESSDEEGGDSDDEDIDDLLEALEKGRDTGKIKQTRKRKLDDLGDS
DDEGKAKPKYKAGGGGIHRPLDGQKQVKKPAPGAEYKAKKADGDVKKKGKVDPYAYVPLD
FRSLNKRKQAKVKGQFTNFVKGAKKGALKGKKAKKKT
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgggaagtaaagccaaaattaactccaaacatagggtccacaaaggaaaagct
aaaagatggaagaaaggccacagttccacatcaaatccagaaaagaataaatttagggaa
gctgccaagaacagattttttaacaaaatagaaggccccagctctttgactgttgatgct
ctcgtgaaacatgacaaatcccacagcagtactgatgtggaatccatggcaactgagtct
gaccagcagacgatgggtacattcaagacatgggccaccaactggactgactgcaccaac
acaacatttagcaaagtgcaccgctactggtcctctaactcagctctgcataaagagata
ttagctgtgttggctgctgttactgaggtgatcaaactacaaggagggaaggaaacagag
acggaatactttgctgctttgatgaccgccctggagaccacagaagaggatgattccact
tcagctattgtttatcttatctctctggtcatgaaacgagtaccagtagctgttttgaga
agcaagttttcagaggttgcaaaatgtttcctcgatctgatggccaaatattccgatgga
gagtcaacatcgctgatgaaatctctcttgatgtccctgtctctgttgctgagatcacaa
gaggcagctgcctggagtaactcatccacacagcagatctacaaggcattgcttactttt
gtagcacacaagaaacccaaggttcgaaaggctgcacatcaaggtgtatgcatcgttttg
aagggcagtttgtttctgttggaattgaactctccgaagcatcatccagctgcaagcctc
acagctaagcattgtgtacaggtcatggaaaatgctggaggtttgggagaagcggtagac
acactacacacactggctctgttgaaacagatactacctgttttaccacttaactccacc
aaggtcgtgtgtgaaaccattctcaaggtcatgaccttgagcaatgtgatggtgactgct
ggaggcatgcaggctcttcacagtcttttcgctgctgccccaaagccagactgcttatca
gcagctttaaatgcacaagttatcaatgccctgtatgactaccagccatcggagaatgac
gtacaaccaacccaggcctggcttgttgtcatggaaacagcccacattaacctggccagg
ttggatgcagccctgtgtttgagtcacttgccacgtctattctcatcggggatgctgtgt
atgctctccgtgaagcctgaaatcacacaggcagctgctaagatgatgaagggtgtgata
tcggagtcactaggagcccaagtcgacatagtgggctcccaactagcgagtgggggttca
aacacacccgctcagaagattgtccgggctttagagagtgggcttggctaccagtttcat
gcttcctggggtctcgtgcttcagatatttgctgtactgtacaagactgtggggaaagca
agtcctaaggcatttcataagagcctgactttgatggcagaccttagggacagtgtgcgg
tttgcctacaagggggaacttgatcatgctgttggggctgcagtgaaagccatggggcca
agagaggtcctaacagccataccactccagataactggccagagtgatgacctggatttc
ccgaggagctggttgttacctgtgatcagagacaacgtacaagagaccgaactagccttc
ttcacatcttactttctaccactagctgctaaactgagacttaggtctctggagttagcg
gaccagcagaatgttgtggcttccaagacgtatgaggcattacagctgcagatgtggtcc
ctgctgcctggcttctgtacaagacctactgacctagtcgcttcgttcaagggtatagcc
aaagtgttgggtactgctattagtgagagagatgacctaagaatggaagttatggcctcg
cttaggaaactcatcactcagagtctctcatcagaggaggcacgtaatgagctatgtcgt
ttctccaagaacttcttaccaatcttgttcaaccagtacacgactgacccaacaacggaa
aaagacatgagtaaactagctgttcttgagactgtcaagtgttacctacaggtcaccgat
aaagagagtgtagccatattctgtgataaatgcagagataaactgaaagaagagggcatt
tcctcctacaaaaggtatgctctccatgatttgctgatagccatgctgccgtaccttgag
aaacagcagctattgaccatatttaaactagcagagcagaacctacaggtattggacaag
tcgttacagaagaaatgttaccgtattcttgaggagatatgtgggggcaagtcggagcag
actagagattttgtacaatcccacctacaaaccatccaacagacgctgctggcctcgtta
tcatcttctagcccttcgtcaaaggcaccaagactgcgatgtttagtaaatattttcaaa
cttctggaaattccccagaatgacttcttgctggctgtagtacctgaggctattctgtgt
acaaaagaggtagcagagagagcacgtgtggctgcatatgctcttctagtagagatggga
aatgccagtctgcgctgggcaggagaggataactcaggaggcctggaggagttcttcaag
atggtgatggctgggtttgcaggcagccctcagatgatcagtgccaccctgatggccctg
acacgcatcatgtaccagttcaaagacaatatatcatcgaccatgctggagtccatattg
tctgatgtctgtgttctcctgaagtccaagtctcgcgaggtggtgcaaggggcactgggt
tttacaaaagttcttgtatcttcacatcaagtgaccacattggctccacatcttaaaact
attatgtcaagtctcactagcatgaaggaagattgccatcaccacttcaggttcaaggca
aaggaggtgtacacaaaactcgtcaagaagtttggatatgagacaatatatggcctagcc
ccagagagtatacgaaggcaactggttaatgtccgtaaaaccatggagcgtgccaagaag
cagaagacccagaaagacaagggccacgatagcagtgatgatgatgaggatgacaagaag
tttgcaagacattctgagtctattgatgaccttctgaaggactcagactctgagcctgag
gaggaagacaaggccaagaagtcaaaggtcaaggacaagggtcaaaaggtgaagaaggcc
caagggggtcaggcatggctgcaggagggtggggatgatgacattactgacttcatggac
acatccgcggctaagaaagttatggcaacaaaaccagttgagaaaaaacaaaagaaggct
gactctggcttcaagacagctccagatggtcgactcatcattacagagtccagtgatgag
gaaggtggtgactcagatgatgaagacattgatgaccttctggaagcattggaaaaaggg
agggatactggcaagatcaagcagacgaggaagaggaaactggatgaccttggagattcg
gatgatgaagggaaggctaaacctaaatataaagcgggaggcggaggtattcatcgaccc
cttgatgggcagaagcaagtgaagaaaccagcccctggagcagagtacaaggccaagaaa
gctgacggggacgttaaaaagaagggcaaggttgatccatacgcttacgttcccctagat
ttccgatccctcaacaaacgcaaacaagcaaaggtgaaaggccagttcacgaactttgtg
aaaggagcgaagaaaggggcattgaagggcaaaaaggcaaagaaaaaaacatag
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integrated database retrieval system