Mya arenaria (softshell): 128212358
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Entry
128212358 CDS
T09995
Name
(RefSeq) nucleolysin TIAR-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128212358
03041 Spliceosome [BR:
maea03041
]
128212358
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
128212358
Spliceosome [BR:
maea03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
128212358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_5
Nup35_RRM_2
RRM_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
128212358
NCBI-ProteinID:
XP_052773726
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All DBs
Position
12:29287246..29434726
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AA seq
436 aa
AA seq
DB search
MKIAVDFSGVSSQASKGPALEAYCQQCYSMSAGGLYPHPVPIEQFPTGFFNQASSMDPVV
NGNSYVCLVPFFNRLVQNSGLIQSNGMLQNSDYIQNGLTGNFTPVLMDNGTTQTPPLEMK
VNWATSPSNVPKQDTSKHFHIFVGDLSPDIETHQLKGAFQVFGEISDCKIIRDPQSLKSK
GYGFVSFVNKQDAETAISSMNGQWLGSRPIRTNWATRKPPAPPTKENFQSQGRFFSNVKQ
LNFDEVMAQSSATNCTVYCGGILNGLTEDIIKKTFTSFGNIQEIRVFKDKGYAFIRFDNK
ESAGQAICGVHGQVIAEQQVKCSWGKESNEQSQSSSSGMMGSTSPQQFNGNGMGGNMGYN
NYNMGYGNYYPGYGGQQSYNVQGGYGGAGYGYQYGSMPVQGQWGMQMQPGQAAPGYGQGG
YQMGVTSPVALIRPAP
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagcagttgattttagcggtgtgtcatcgcaagcttcaaagggtcctgctctg
gaagcttactgccagcagtgttactccatgtcagctggaggcttgtatccacatccggtg
cccattgagcaatttccgacaggatttttcaaccaagctagtagcatggaccctgtagtg
aatggaaattcgtacgtgtgtcttgtgccattctttaatagacttgttcagaattcagga
ctaattcagagtaacggaatgttgcagaatagcgattacatacagaatggactcactggt
aattttacgccagttttaatggacaacggaaccacacagacaccccctttggaaatgaaa
gtaaattgggccacatcacctagcaatgttccaaaacaggacactagcaagcatttccat
atatttgttggagatttgagtccagatatagaaacacatcaactgaaaggtgccttccaa
gtatttggtgaaatttcagactgcaaaataatccgtgatccccagtcactcaagtcaaag
ggctatggcttcgtgtcgtttgtcaacaagcaggatgcggaaactgcaataagcagcatg
aatgggcagtggctgggaagccgaccaatcagaaccaactgggccactcgcaaaccacct
gccccacccaccaaggaaaattttcagtcgcagggaagattcttttcaaatgtaaaacag
ttaaacttcgacgaggtgatggcccaatccagcgcaaccaactgtaccgtttactgtgga
ggcattctcaatggcttaacagaggatattatcaagaaaacattcacttccttcggaaat
atacaagaaatcagagtgtttaaggacaaaggctatgcttttataaggtttgataataag
gagagtgcaggccaggcaatatgtggtgttcacggtcaggtgattgccgagcagcaggtg
aagtgttcgtggggcaaggaaagcaatgagcagtcccagtcctcctcatcaggaatgatg
ggatctacatcgccacagcagtttaacggcaatggtatgggtggtaacatgggatacaac
aattataacatgggatacggcaattactaccccggatacggtgggcaacagagctacaac
gtgcagggaggatacggcggagcaggatatggctatcagtatgggagtatgccggtgcag
ggtcagtggggaatgcagatgcagcccggtcaggcagcccccgggtacggacagggagga
taccagatgggcgtgacaagcccagtggctttaatccgccccgccccatga
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