Mya arenaria (softshell): 128212480
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Entry
128212480 CDS
T09995
Name
(RefSeq) nuclear pore complex protein Nup107-like
KO
K14301
nuclear pore complex protein Nup107
Organism
maea
Mya arenaria (softshell)
Pathway
maea03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128212480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128212480
03036 Chromosome and associated proteins [BR:
maea03036
]
128212480
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128212480
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
128212480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
128212480
NCBI-ProteinID:
XP_052773924
LinkDB
All DBs
Position
12:12229090..12250198
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AA seq
957 aa
AA seq
DB search
MDLSQDDSFAVRRHGRRSLQALEAMLDAGSPAVRDQQISKTFRRRSAATALSVQKSIQLL
DESISSPSSKQVRTPGNLKHSTYIPKHLNSGSKFDVSSRMGVMGRKTPQKDRSHHGSFHE
DSFSSSFHNLSGMKPLPEETEDVTTTNVRLLLEEDPGISASKSLYTDFLQCLKEHAPADE
LFTLVEGYEGLCQEQVSMLKKLIRHASRQDEKFTKTFKVLHELCLEESTWKLAKNLFKDR
QESAVQEDIGMDQDGDDAPLVQGILQSDRKIVNELFEKEQAIREAQLVVDWLESGAQDDF
ENFSENVKFFSDRAVGYENSRHRLMNKSSGVPTGAERSQVTELDPDAPMRQNMLLDDLDK
EDEDRLLQYIFICLRAGQLEKAQKTCIDCGQAWRAATLEGWRLFHDPNFSGLGPECQRSP
VEGNPNRDIWKMVCWNMVQDPRVNTYEKAIYSVLSGNLRGLLPVCRSWVDYLWAYFRTLV
DVKVENEIRLKSTIRRSLENLPGEYWEKNLNAKTVFREIEANESLKQEAYELHHIIQKYI
ILGDITGLVDVLYERVTGPDISPHTLRFLAHFVLFLRHIGHRSQESQCDMILERYVEHLI
TSRQHSLVAHYVAKLPQAAQIHWYSKFLEGITDHEERQHFLELGEGEGLDVAMITKRVVE
NIRSRSHVDFSRIHDTQSVDTNISEEDRQKIEAIDWLVFDVAQRAEAVRQANAVMRTFIA
LKKLEAAKAVFDKLPPDSVDVIHKIWHQQMGTPVLPPEDCNAIREYLCIKAYLDAMESFN
DWVQHYHHGKPTKPPAPAGGSFTDKVAHEHRLKQYEQEHDRWRHNLLMQTQSTKEHIYNV
LLFADGGWMVDQPQEKDEEDMSDDQAIDTAIDPQRVEQMQRLRGLVLPGLTVLLHSVLHS
SEQFEECVRLADILASEQHTLYKVFQKAELQRLLQLIRDSSLQLLDQGRGPLGYEQS
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggacctatcacaggatgattcttttgctgtaaggaggcatggacgacggagcctacag
gcactggaggccatgttggatgctggatctccggccgtacgggaccagcagatcagcaag
accttccgcaggcgtagtgctgctacagctctcagtgtacaaaagtccatccaattgtta
gatgagagtatctcatccccaagcagcaagcaggtccgtactccggggaacctcaaacac
tccacatatatcccaaaacaccttaactcagggagtaaatttgatgtgtcgtcacggatg
ggggtaatgggccggaagaccccgcagaaggatcgctcacatcatgggtcgttccatgaa
gacagcttttcctcctcattccacaacctgtctggtatgaagcccctacctgaggagaca
gaggatgtgactaccaccaatgtgcgcctactgctggaggaagatccaggtatctcagcc
tccaagagcctgtacactgacttcctgcagtgtttgaaggagcacgccccggcggacgaa
ctttttaccctcgtggaaggatacgaggggctctgtcaggaacaagtctctatgctcaag
aaactcatcagacacgcctccagacaagatgaaaagttcacaaagactttcaaagttttg
catgagctgtgtctggaggagtctacatggaagctggccaagaacctgttcaaggacaga
caggagtccgccgtgcaggaggacattgggatggaccaggatggggatgacgcccccctt
gtgcagggaattctacagagtgacaggaagatcgtcaatgaactgtttgagaaggagcag
gctatcagggaggcacagttggttgtggattggctggagagtggggcccaggacgacttt
gaaaacttctctgagaatgtcaagttcttctcagacagggccgtaggatatgagaattcc
cgacatcggttgatgaacaaatcttctggagtgcctacaggagcagagcgatctcaagtc
acagaattggacccagatgccccgatgcgacagaacatgctccttgatgaccttgacaag
gaagacgaagacaggctacttcagtacatctttatttgtctccgcgcaggacagttggaa
aaggcccagaagacatgtattgactgtggacaggcttggcgagctgcaactctcgaggga
tggcgactatttcatgacccaaacttctccgggctcgggcctgagtgtcagcgctcgcca
gtggagggaaaccctaacagggacatctggaagatggtctgctggaacatggtccaggat
cctcgtgtaaatacctacgagaaggcaatatactcagttctcagcgggaatctccgcggt
cttctgcctgtgtgccggtcctgggtggactatttgtgggcctatttccgtacgttagtt
gatgtcaaggtggaaaatgagatacgtctgaaatccactatcaggcgctccctggaaaac
ctgccgggggaatactgggagaaaaacctgaatgctaagacagtgttccgagagatagaa
gctaatgaatctctgaagcaggaggcttatgagctgcatcatatcatccagaaatacatc
atcctaggggatattaccggcctggtagacgtcctgtatgagcgtgtgacgggccccgac
atctcgccccacaccctgaggttcctggctcactttgtgctcttcctgcgacatattggg
cacagatcacaggagagccagtgtgacatgatactggagagatacgtggaacatctgatt
accagtcgccaacacagccttgtggcacactatgttgccaaactgccccaggctgcacag
atacactggtacagcaagttcctggagggaatcacagaccacgaagaacggcaacacttc
cttgagctgggtgagggagaggggctagatgttgccatgattaccaagcgtgttgtcgag
aacatacgtagtcggtcacatgtagacttctcccgcatacatgatacacagtcggtggat
acaaacatctcagaggaggatcgccagaagattgaggcgatcgattggttggtgtttgat
gtggcccagcgtgcggaggctgtgagacaggccaatgctgtcatgaggacattcattgcc
ttaaagaagctggaagctgccaaggctgtgtttgacaaactgccacctgactctgtggat
gttatacacaaaatatggcaccaacagatgggcactccagttttgcctccagaagactgc
aatgccatacgtgaatacctgtgcatcaaggcgtatctggatgcgatggagagtttcaat
gactgggtccagcactaccaccacgggaagcccaccaaaccgcctgcacctgcagggggc
tcgttcacagacaaggtcgcgcacgaacaccgcctcaaacagtacgagcaggagcatgat
cgctggagacacaaccttctaatgcagacacagagtacgaaggaacacatatacaatgtg
ttgttgtttgctgatggtggctggatggtggaccaaccccaggagaaagatgaggaggac
atgtcagatgaccaggccatagatacagccatagatccccagcgtgtggagcagatgcag
cgccttcggggcctcgtgttgcccggccttaccgtcctgctccactccgtgctacactca
agtgaacagtttgaggaatgtgttcgccttgctgacatattagcctctgaacaacacact
ctgtataaggtgttccagaaagcggagttacagcgtctgttacagctgatccgggactca
tccctccagctgctggaccaaggtcgagggccactgggatatgaacaaagctga
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