KEGG   Mya arenaria (softshell): 128212771
Entry
128212771         CDS       T09995                                 
Name
(RefSeq) nucleoporin NDC1-like
  KO
K14315  nucleoporin NDC1
Organism
maea  Mya arenaria (softshell)
Pathway
maea03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:maea00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    128212771
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:maea03019]
    128212771
Messenger RNA biogenesis [BR:maea03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     128212771
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 128212771
NCBI-ProteinID: XP_052774035
LinkDB
Position
13:41866930..41897830
AA seq 557 aa
MDTIDKWFIREVLVWRSGAAVAWSVFSLPVIAGFYVSLTTLQPLHPLSWLPDTFGCVLSL
SFISCVLLLMILNGLFYSYSRKTFTVVPTASVTRFSHLGQLCRGPVLLYMTICMGSGHLI
GWVCTGLLGARYAGLTFKCEPDSESRCINEHHLFLVLYGGYTGLMYIVHHYIQQNHVIRF
PQAQEAKYAQVRCQLASTVWSALGHVVWQIKFFYLGFYLLGGIPRDFIASSLSLNYGPGP
RLDSMRGLLFDVALLWQTLLLGVFIQFSWTLAALLHKIYNTESYEFPISTMFDNFKNKCL
VDAMSCTSLPLLQALGFQDLNHLSKHSLGRRKELFSLSQPGGHPHNWNKILAVCLSVLNE
LSEGVQEVNWKILASAPVRKPSAEKHAVTTEGGKTESSEADQNEKKSTVRERIINGIKRR
PEMKFFTREGGEPNKSKNLFATAYLQIWTVEALASLVGASVREDLFGVVQMSLSDIVSNI
LNLHENVDKHFKLTGGVGRRSAREGGGASDLSLKYQLQASIKASIYNIVNTFGKHLLEVG
LPPETEKRLQHFLHYRE
NT seq 1674 nt   +upstreamnt  +downstreamnt
atggacacaatagacaaatggttcatacgagaggtgcttgtctggagaagtggcgctgca
gtggcatggtcggtgttctctctgccagtgattgcaggcttctatgtgagtctgaccaca
ctccagcctctccatccacttagttggcttccagatacatttggatgcgtgctgtcattg
tctttcatcagctgtgtgctgctgttgatgattttaaatggactgttttactcatacagc
agaaaaacatttacagtggtgcctactgcatcagtgacaagattttcccaccttggtcag
ctatgtcggggcccggtgttactatatatgaccatttgcatgggctcaggacatctgatt
ggctgggtgtgtacagggctccttggggctcgatatgccggccttacattcaagtgtgag
cctgacagtgaatcacggtgtatcaatgagcaccatctgtttctggtgttatacggtgga
tacacaggcctcatgtacattgtgcatcactacatccaacagaaccatgtcatacgcttt
ccccaagcccaggaagccaaatatgcccaagtacgttgccagctagccagtacagtctgg
tcggctttgggacatgtggtctggcagataaagtttttctaccttggattctatcttctt
ggtggaattcccagagatttcattgcttcaagtctttctttaaactatgggccaggccct
agactggacagtatgagagggctgctatttgatgtggccctgctgtggcagaccctgtta
ctgggagtgtttatacagttctcctggacccttgcggctcttcttcataagatatacaac
acagagagctatgaatttccaatcagcacgatgttcgacaatttcaagaacaagtgtctg
gttgatgccatgtcctgcacaagcctgcctctacttcaggccctaggcttccaggatctc
aaccatctgtctaagcattcacttggtcgacgaaaagagctgtttagtcttagccaacca
ggtggtcatccccacaattggaacaagattctggctgtgtgtctctctgttctcaacgag
ctcagtgaaggtgtccaagaagttaactggaagatcctggctagtgcccctgtacgaaaa
cctagtgctgaaaaacatgccgtgacaacagaaggagggaaaacagaaagtagcgaagct
gatcaaaatgaaaagaaatcaacagttcgagaaagaataataaatggcatcaaacgaaga
ccagagatgaagttcttcacaagggaaggtggagagcccaacaagtccaagaacctgttt
gctactgcatatctccagatctggacggtggaagccctggcctccctggttggtgcctct
gtgagggaggatctgtttggggttgtccagatgtccttgtcagatattgtttccaacatc
ctcaacctacatgagaatgtagataaacacttcaagctgacaggtggggtggggcggcgc
tcggccagggaggggggtggagctagtgacctttcactcaaataccagttacaggcctcc
atcaaagcctccatatacaacatcgtcaacacttttggaaaacacttactagaagtgggc
ttgcctccagagactgagaagagattacaacattttctccattaccgagaataa

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