Mya arenaria (softshell): 128212870
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Entry
128212870 CDS
T09995
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
maea03016
]
128212870
Enzymes [BR:
maea01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
128212870
Transfer RNA biogenesis [BR:
maea03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
128212870
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Motif
Other DBs
NCBI-GeneID:
128212870
NCBI-ProteinID:
XP_052774206
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Position
13:3839110..3848728
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AA seq
556 aa
AA seq
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MVEEVLTKSASICKMGNEKKEQPQPEPPVGSCHFFVKRKRRYCRFTRAKDSNYCAEHATI
FDADVGKKRVLCPYDGKHTCYEAKLNHHMKKCPSRPKDMPAYYSAGINSGDDAGETVPDP
KATVLTVPQAELEDLIDKVNQLYKEHIVSLGEEVLTHSCMQEEIERPGYGTAAIRHRKQQ
ASLIGHMESLGLLVDNRCFLEMGAGKGQLSHWLHGAVKERNNIGFLLIDRSHVRNKMDNL
HKEEGVMERIRIDIEHLRLDKVTCLCESDRSVVAFGKHLCGPATDLALRCVTETLAQETQ
HGEGAPRKRLKSESRQLAGAVIALCCHHRCAWRPYVGKGFFQECGLTARDFQVIASMSSW
ATCAWKGWSSQRKAATEKGIGARDGGIEGNGEVGLSKEDKFNLGVDSGDNVGNVAHVDKQ
KDAVVEQQKKKISGTEMDNKNNVQNNKIATFPTSLKAVCGRVSEASSTEKGRASGQTETS
DETEEVEEEHQNVETMDGCSINSKLTQSEREQIGRKCKRLIDHGRICYLQEHGLRSTMKI
YIEEFFTPENVVLLAS
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggttgaagaggtactcacgaaatcggcttctatctgtaaaatgggaaatgaaaaaaaa
gaacagccccaaccagagccacctgtagggagctgccatttctttgtgaagcgtaaacgc
agatactgcaggttcacgcgagccaaggactcaaactattgtgctgaacatgcaacaatc
tttgatgctgatgtagggaaaaagagggttctctgtccatatgatggaaagcacacctgc
tatgaagccaagcttaatcaccatatgaaaaaatgtccaagtcgacccaaggatatgcca
gcatactacagtgctggcatcaacagtggagatgatgcaggggagactgtaccagaccca
aaggcgacagttttgacagttccccaagcagagctagaagaccttatagataaagtcaat
cagctatataaagagcacatcgtgagcctgggggaggaggtccttactcacagttgcatg
caggaagagattgagagacctggttatggtacggcagccataagacacagaaaacaacag
gcatcactgattggtcatatggagagtcttggtttgcttgtggacaacaggtgctttctg
gaaatgggtgctggaaaaggccagctatcccactggcttcatggagcggtcaaggaaagg
aacaacattggctttctcctaattgaccgcagccatgtcagaaataagatggacaacctg
cacaaagaggagggggtcatggagaggatccggatagacatcgagcatctccgtcttgac
aaggttacatgcctgtgtgagtctgatcggtctgtggtggcatttgggaaacatctgtgt
gggccggccacagacttggccctgcgatgtgtgacagagacactggcacaggaaacacag
catggggagggagcacccagaaagaggctcaagtcagaatctaggcagctggctggagct
gtgatagccttatgttgccaccacaggtgtgcctggaggccgtacgtgggtaaaggcttc
ttccaggagtgtgggcttacggcccgggacttccaggtgatagccagtatgagcagctgg
gccacatgtgcctggaagggctggagttcccagaggaaggctgcaaccgagaagggaata
ggggctagggatggaggcattgagggcaatggtgaggtggggttaagtaaagaagacaag
tttaacctaggtgttgacagtggggataatgttgggaatgtagctcatgtggacaaacaa
aaagatgctgttgtggaacaacaaaagaagaaaatatctgggacagaaatggataataag
aataatgttcaaaacaacaaaatagcaacttttcctacttcgctgaaagctgtctgtggc
agagttagtgaggcaagcagtacagaaaagggaagagccagtggccaaactgagacatca
gatgagacggaggaggtggaagaggaacaccagaatgtggaaacaatggatggctgcagc
ataaacagtaagctgacacaatctgagcgagagcagataggaaggaaatgcaagcgtctg
atcgaccacggacggatctgttacctccaggagcatggtctgaggagtaccatgaaaatc
tacattgaagagttctttacaccagaaaatgttgtcctgctcgcttcctaa
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