Mya arenaria (softshell): 128213014
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Entry
128213014 CDS
T09995
Name
(RefSeq) S-phase kinase-associated protein 2-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
maea
Mya arenaria (softshell)
Pathway
maea04068
FoxO signaling pathway
maea04120
Ubiquitin mediated proteolysis
maea04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128213014
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
128213014
04150 mTOR signaling pathway
128213014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
maea04121
]
128213014
Ubiquitin system [BR:
maea04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
128213014
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_4
LRR_14
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
128213014
NCBI-ProteinID:
XP_052774430
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Position
13:complement(33753176..33766154)
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AA seq
508 aa
AA seq
DB search
MPKKRTIKNFCNNDQKENKFFKSRKRKASSPLEEIDINVPQTNHVNNKQSKSNAPWENKK
PDHTETILHTMGLDYLSQGSTDSCASSENTENTPALLGKDENSQSSCSSFHLPPVPGAPR
VLLDSHRDNLTSSSDDSENSLDPNVTPSLKLLHSNPQHLHLCINRPAKRQKTDPDAFDHF
SLLSDEMVLGVFSWLPKFVLAKCARVCKKWSRLVLDESLWKRLDLSARTLGPGVLGLVLN
RGVMALRLAKTEIEGPIFTGPSSPMKSARLCKVQYLDLSMAGTSPEVLEEIFSICKELRK
LSLENLQLNDKVCSLIGENRELTTLNMAMCQGISVNSLIPILSNCRQLESLHVGWTNLHH
HSVVYMCLCAPPSLTHLNISGCRENITDEEVLQLCKTCPYLRELDLSDSTALTNTSVTSI
IENLPCLEHISLSRCYHISPGVIPELNEMPSLMAVNVFGMLREGPLEVLKVNMPRVEVNT
FHFSDVARPTTGIRRTSIWGIRVRDNAA
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaaagcggacaataaaaaacttctgtaataatgatcaaaaggagaacaaattt
ttcaaatcaagaaaaaggaaggcatccagcccattggaggaaatagacatcaatgttccg
cagaccaaccatgttaacaacaaacaatcaaaatcaaatgccccttgggaaaataagaaa
ccagaccatacagagacgatcctacacacaatggggctcgactatctctcacagggcagc
acagatagctgtgcaagctcagagaacacagaaaacaccccagctttgttaggaaaggat
gagaacagccagagtagctgctccagctttcatcttcctcctgtgccaggggcaccaaga
gtccttttagacagtcatcgagacaaccttacatccagcagtgacgactctgagaacagc
cttgatccaaatgttaccccatccttgaaattgttacactctaacccacaacacttacat
ctatgcatcaacagaccagccaaaagacagaaaacagacccggatgcatttgatcatttc
agcttgctgtcagatgaaatggtattaggtgtgttcagctggttgccaaagtttgtgctt
gcaaaatgtgctagagtgtgcaagaaatggagcagattagtgctagatgagtcattatgg
aagagacttgacttgtctgccagaaccctgggtccaggagtacttggtcttgtcttgaac
agaggagttatggcattacgactggcaaaaacagagattgagggaccaatatttaccggc
ccatctagtcctatgaaatcagcaaggttgtgtaaagtgcaatacctggacctgagtatg
gcaggaaccagccctgaagtgctcgaggaaatcttctccatatgtaaagagctgcggaaa
ctcagcctggaaaacctccagctaaacgacaaagtgtgcagtctgatcggagagaaccgt
gagctgaccacactcaacatggccatgtgtcagggcatctcagtcaacagtcttataccc
atactctccaattgccgacagttggagtccctacatgtaggatggacaaatcttcaccat
catagcgtcgtctacatgtgtctgtgtgccccaccctctctcacccacctcaacatcagc
ggctgtagggaaaatatcactgatgaagaggttcttcaactgtgcaagacgtgtccctat
cttcgggaacttgatctcagcgactctacggccctgaccaacacctctgtcacatctata
atagaaaaccttccctgcttggagcatatctccctcagcaggtgctaccacatatctcct
ggggtgatacctgagcttaacgagatgccttcgctgatggctgtgaatgtttttgggatg
ttacgagagggtccgctagaagtgcttaaggtgaacatgccgagggtggaagtcaacact
ttccacttctctgacgttgcacgtccaaccaccggcatcaggcgtaccagtatatgggga
atcagagtgcgagataacgctgcatag
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