Mya arenaria (softshell): 128213252
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Entry
128213252 CDS
T09995
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
maea03016
]
128213252
Enzymes [BR:
maea01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
128213252
Transfer RNA biogenesis [BR:
maea03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
128213252
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Motif
Other DBs
NCBI-GeneID:
128213252
NCBI-ProteinID:
XP_052774788
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All DBs
Position
13:2939317..2954289
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AA seq
542 aa
AA seq
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MGNEKKEQPQPEPPVGSCHFFVKRKRRYCRFTRAKDSNYCAEHATIFDADVGKKRVLCPY
DGKHTCYEAKLNHHMKKCPSRPKDMPAYYSAGINSGDDAGETVPDPKATVLTVPQAELED
LIDKVNQLYKEHIVNLEEEVLTHSCMQEEIERPGYGTAAIRHRKQQASLIGHMESLGLLV
DNRCFLEMGAGKGQLSHWLHGAVKERNNIGFLLIDRSHVRNKMDNLHKEEGVMERIRIDI
EHLRLDKVTCLCESDRSVVAFGKHLCGPATDLALRCVTETLAQETQHGEGAPRKRLKSES
RQLAGAVIALCCHHRCAWRPYVGKGFFQECGLTARDFQVIASMSSWATCAWKGWSSQRKA
ATEKGIGARDGGIEGNGEVRLSKEDKFNLGVDSGDNVGNVAHVDKQKDAVVEQQKKKISG
TEMDNKNNVQNNKIATFPTSLKAVCGRVSEASSTEKGRASGQTETSDETEEVEEEHQNVE
TMDGCSINSKLTQSEREQIGRKCKRLIDHGRICYLQEHGLRSTMKIYIEEFFTPENVVLL
AS
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgaaaaaaaagaacagccccaaccagagccacctgtagggagctgccatttc
tttgtgaagcgtaaacgcagatactgcaggttcacgcgagccaaggactcaaactattgt
gctgaacatgcaacaatctttgatgctgatgtagggaaaaagagggttctctgtccatat
gatggaaagcacacctgctatgaagccaagcttaatcaccatatgaaaaaatgtccaagt
cgacccaaggatatgccagcatactacagtgctggcatcaacagtggagatgatgcaggg
gagactgtaccagacccaaaggcgacagttttgacagttccccaagcagagctagaagac
cttatagataaagtcaatcagctatataaagagcacatcgtgaacctggaggaggaggtt
cttactcacagttgcatgcaggaagagattgagagacctggttatggtacggcagccata
agacacagaaaacaacaggcatcactgattggtcatatggagagtcttggtttgcttgtg
gacaacaggtgctttctggaaatgggtgctggaaaaggccagctatcccactggcttcat
ggagcggtcaaggaaaggaacaacattggctttctcctaattgaccgcagccatgtccga
aataagatggacaacctgcacaaagaggagggggtcatggagaggatccggatagacatc
gagcatctccgtcttgacaaggttacatgcctgtgtgagtctgatcggtctgtggtggca
tttgggaaacatctgtgtgggccggccacagacttggccctgcgatgtgtgacagagaca
ctggcacaggaaacacagcatggggagggagcacccagaaagaggctcaagtcagaatct
aggcagctggctggagctgtgatagccttatgttgccaccacaggtgtgcctggaggccg
tacgtgggtaaaggcttcttccaggagtgtgggcttacggcccgggacttccaggtgata
gccagtatgagcagctgggccacatgtgcctggaagggctggagttcccagaggaaggct
gcaaccgagaagggaataggggctagggatggaggcattgagggcaatggtgaggtgagg
ttaagtaaagaagacaagtttaacctaggtgttgacagtggggataatgttgggaatgta
gctcatgtggacaaacaaaaagatgctgttgtggaacaacaaaagaagaaaatatctggg
acagaaatggataataagaataatgttcaaaacaacaaaatagcaacttttcctacttcg
ctgaaagctgtctgtggcagagttagtgaggcaagcagtacagaaaagggaagagccagt
ggccaaactgagacatcagatgagacagaggaggtggaagaggaacaccagaatgtggaa
acaatggatggctgcagcataaacagtaagctgacacaatctgagcgagagcagatagga
aggaaatgcaagcgtctgatcgaccacggacggatctgttacctccaggagcatggtctg
aggagtaccatgaaaatctacattgaagagttctttacaccagaaaatgttgtcctgctc
gcttcctaa
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