Mya arenaria (softshell): 128213299
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Entry
128213299 CDS
T09995
Name
(RefSeq) toll-like receptor 4
KO
K18808
toll-like receptor 13
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
maea04054
]
128213299
Pattern recognition receptors [BR:
maea04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
128213299
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR_2
TIR
LRR_14
LRR_EndoS
LRR_Zer-1
LRR_LRWD1
LRRNT
Motif
Other DBs
NCBI-GeneID:
128213299
NCBI-ProteinID:
XP_052774861
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Position
13:complement(66662419..66667079)
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AA seq
911 aa
AA seq
DB search
MSDLILIILLCSFLAIGHCQYMESPNMSCEIPKTSRKSRCGTSDPCWCYYSSILTVDCSG
SNLEKVPHGLPTETVILILQNNSINTTEKGSFARFTNLTCLDLSSNKIGTIKTGSFMNSL
FLRTLLLSENNITYFGKGVLSTHNYLETLDVRRNLRKAKTSYPCKIQQETQKATNLQELS
IDGSPCTANLSFSHLTSLILGGDETLCDINTILSSMFTQLPSLRKLQLRNCQIQRVENGS
FSNLKNLRFLDLSSNPYLTFSAMPNFTFGLIPTNISFLNISNLHTTFGDCTILTASDLEY
LSKTSIEHLYLDSNRINNMEIEAVRFIPKQLKTLSVVDNKLALGHYVVQIFANIVTKELF
SDLETIWFSHQHKDHRFRHFYLVNDVFQRKLSHNANITNRAMLYSDPKRSSRTRYLRSMT
DNNARKLKNESFKDDLLDDFTSSIDFQIRNGLCDNCLNVSNSIPRFPLPAAVRHVDAKDL
KVRTTIRSSCFCQPNNIQTVNLSTNVLHTWNGPILGLDKLKELHLDDNSCSEIAQNAFHN
MANLEILNMAQNYLGYVFKNDNEGILLSRLKKLKYLDLSSNKIKQLPKGVFIGLVGLQQL
LLRDNILESVSFEANHMQHLKFIDLTLNMIKTISPDTLTLFTKVIVGNNFSIALKKNNFC
CTCKYVYLVKWFSETKVTAFQELNQYKCTFDNGSKGYLSNAHQIYKTLNKQCANYLPLIV
STSISLFIILVIITCSFVYRYRWDLRYMYYSAKYRFKGYVPVNHEYGDYEFDAFVSYAEK
DAVFVRQRLVPELESIRSLRLSVHDRDFLAGNMINENIIHAITSSRKTLIIMSPNFLASS
WCVYEMNMARMETIKTGRDVLCVVLKENVQTNGLPLEILDVFRERTYLELPVEGGDLEDQ
FWDRLADAVCQ
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacttaattttaataatattgctctgctcgttcttggccatcggtcattgtcag
tacatggaatcgccaaatatgtcatgtgaaattcctaagacttccagaaaatcaagatgc
ggaacgagtgacccatgctggtgttactattcatctatattaactgtagattgttctggc
tcgaatcttgaaaaagttccgcacggattaccaacagagactgttatattaattttgcag
aacaattcaataaataccactgagaagggctcgttcgctcgtttcaccaatctaacttgc
ttagatttatcatcgaacaagattgggacaataaagactggttcctttatgaacagtttg
tttctacgaacactccttttaagtgaaaacaatatcacgtattttggcaaaggcgttctt
tcaacccacaattacttagaaacactggatgttagaaggaatttaaggaaagctaaaacg
agttatccatgtaaaatccaacaagagacacaaaaggctacaaatctacaagagttgtca
atagatggatctccatgtaccgcgaacctcagcttttcacaccttacatcgcttattctt
ggaggagacgaaacattgtgtgatataaacactattctatcaagtatgttcactcagcta
ccaagtctccgcaaactgcagctacgcaattgtcaaatccaaagggtcgagaatggtagt
ttctctaatctgaaaaatttacgctttcttgatttgtcctcaaacccttatcttacgttt
tcagcgatgccaaatttcacatttggattgattcccaccaacataagttttctgaatatc
tcaaacttgcacacaacctttggtgactgcaccatattaacggcatcagatcttgaatac
ctttcaaaaacaagcatcgaacatttgtacctcgattccaatcgaatcaacaacatggaa
atagaggcagttcggtttattccaaagcagttgaagacgttatcggtggttgacaacaaa
ttagctctgggacattacgtggttcagattttcgccaatattgttactaaagaactattt
tctgatttggaaacaatttggttttcgcatcagcacaaagaccatcgatttagacatttt
tatttagtgaacgacgtgtttcaacgtaaactgtcccacaatgcaaacatcacaaatagg
gcaatgttatattcggacccaaagcgatcttcaagaacacgatatttgcgctcgatgacg
gataacaatgctagaaaactgaagaatgaatcctttaaagacgacctattggacgatttt
acttcatctattgatttccagatcaggaatggtctatgcgataattgtctaaatgtttca
aattcaatcccaaggtttcctcttccggcggccgtgcgacatgtggatgcaaaagatctt
aaagtacgtactacaatacgcagctcctgtttttgtcagccaaataatatccagaccgtt
aatctttctaccaacgttttacatacttggaacggaccaatactaggtctagataaactg
aaagaattgcatttggacgataactcttgttctgaaattgcccaaaatgcatttcacaac
atggccaatctagaaattctgaacatggctcagaattatttggggtatgtttttaaaaat
gacaatgagggtatcttattaagtaggcttaaaaaattaaagtacttggatctttcttca
aacaagatcaaacaacttccaaagggagtgtttattggacttgtgggtcttcaacagttg
cttttgcgagacaacattctcgaaagcgtctcatttgaagccaaccatatgcaacatctt
aaatttattgacctaactttgaatatgatcaaaacaataagtcctgacacccttacgctt
tttacaaaagtgattgtcggtaacaatttttctattgcattgaaaaagaacaacttctgt
tgtacttgcaaatatgtttatttggtaaaatggttctctgagaccaaggtcacagctttt
caggaactgaaccagtacaaatgcacattcgataatgggtcgaaaggatatctttctaat
gcacaccaaatatacaaaacactaaacaaacaatgtgccaattacctgcccttgattgtc
tccacgagtatttcgctcttcatcatactcgtcatcattacatgcagcttcgtttacaga
tatagatgggacttacggtacatgtactattcggcaaaataccgtttcaagggctatgtt
ccagttaaccatgaatacggtgactacgagtttgacgcatttgtgtcctatgccgagaaa
gatgccgtctttgttcgccagaggcttgttcccgagttagaatcaattcggagcttacgt
ctgtcggtccacgacagggattttttggccggaaatatgataaatgaaaatattatccac
gcaataaccagtagccgaaaaaccctcattatcatgtcaccaaactttctggccagcagt
tggtgcgtgtacgaaatgaatatggctcgcatggaaaccattaaaaccggaagggacgtt
ttgtgcgtggtactcaaagagaatgtgcaaacgaatggacttcccttggaaattttggac
gtgttccgcgaaaggacctacttggaactaccagtcgaaggaggtgacctggaggatcaa
ttttgggacaggctagcagacgctgtttgtcaatag
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