Mya arenaria (softshell): 128213308
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Entry
128213308 CDS
T09995
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B-like
KO
K03253
translation initiation factor 3 subunit B
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128213308
03012 Translation factors [BR:
maea03012
]
128213308
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
128213308
Translation factors [BR:
maea03012
]
Eukaryotic type
Initiation factors
eIF-3
128213308
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF2A
Beta-prop_THOC3
WD40_WDHD1_1st
Tricorn_2nd
Beta-prop_IFT122_1st
RRM_1
Beta-prop_WDR5
Beta-prop_Aladin
Beta-prop_ELP1_1st
Syntaxin
Beta-prop_CAF1B_HIR1
Uds1
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
128213308
NCBI-ProteinID:
XP_052774878
LinkDB
All DBs
Position
2:66414879..66436951
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AA seq
714 aa
AA seq
DB search
MAAEKGEREGRKQRRSESAADNQADMTYEEEPDFSDPEDFVDDISDEELLGDLLKNKPNE
TDSIDNVIIVDNIPVVGNDRLPKLQNVVRKIYEKFGKLVNEFYPMGDEDKTKGYMFVEFS
NPNSAAEAVKATNGYKLDKAHTFAVNLFSDYDKYENVSDEWEPPSPKPYKDLGNLRYWLQ
DPDCFDHYSVIYEGGEKTAIYSNSVHLGAVRDPTVVEERARWTETYVRWSPQGTYLATLH
QKGIALWGGPKFDQIMRFSHPGVQLIDFSPCERFMITFSPMPPKADEPQSIVIFDIRTGQ
RKRGFNCEQHAQATWPIFKWSSDGKFFARLATDTLSVYETTTFRLLDNKSLKIDGIRDFS
WSPSDNYIAYWVPEQDTNIPARVTIISIPSRTELCVRNLFSVADCRMHWQKNGDFLCVKV
DRYSKAKKAEDTGQMKYAGIYYNFELFRIREKQIPVDKVECKENVLAFAWEPTGNKFAFI
HGESPRISVSFYIVRPQGKVDCLKVFERRTANHLFWSPTGQFIVLAGLRNLNGVFEFIDS
ADMTVMAQTEHFMATDVEWDPTGRYVMTGVSWWGHKVDNGYWLWSFQGRLLQKQQLDRFC
QLLWRPRPPTLLSVDDVKEIKKNLKKFSQRFEAQDRLRQSTVSTELLEKRRKLMDDYERY
RERVEDEFNSQKDRRIAFRNGVDTDELDNLAEADYEEEVIEFLLKVEETILDEE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgaaaagggggaaagggaaggacggaaacaaagacgttcagaatccgctgca
gacaaccaggcagatatgacttatgaggaggagccagattttagtgacccggaagatttt
gtggacgatatatctgatgaagaactgcttggtgatttactcaagaacaagccaaatgag
actgacagtattgacaacgttattattgttgacaacatccctgtagttggaaatgatagg
ctacctaaacttcagaatgttgtcaggaaaatatacgaaaagtttggcaaacttgtcaat
gagttttatccgatgggtgatgaagataaaacaaaggggtacatgtttgttgagttttca
aatccaaatagtgctgctgaggcagtgaaggccaccaatggctacaagctggacaaggca
cacacctttgctgttaacctcttctctgactatgacaagtatgagaatgtatctgatgag
tgggagcccccaagcccaaagccttacaaagatctaggcaacttgcgttactggctgcag
gaccctgactgttttgaccactacagtgtgatctacgagggtggggagaagaccgccatc
tactcgaacagcgtgcatcttggggctgtccgtgaccctactgtagttgaggagagagcg
cgttggactgagacgtacgttcgctggtcacctcaaggcacatacctggccacactccac
cagaagggcatagccttatggggcgggccgaagtttgaccagatcatgaggttcagtcat
ccgggtgtgcagctaattgacttctctccatgtgagaggtttatgataacatttagcccg
atgccgccgaaggctgatgaaccacagagcattgtgatatttgacatccgaacaggacag
cgcaaacgtgggtttaactgtgagcaacatgcacaggccacctggcccattttcaagtgg
agttctgatgggaagttctttgccagattagcgacagataccctctctgtgtatgaaacc
actacatttagactgttggacaacaaaagtttaaagattgatggtataagggatttctcg
tggagcccgtcagacaactacattgcatactgggtgcctgagcaggacaccaacatcccg
gcccgtgtcaccataatctccataccctcaaggactgagctctgtgtgcgtaacctgttt
agcgtggccgactgtcgcatgcactggcagaagaacggagatttcctctgtgtcaaggtc
gaccgatactccaaggcaaaaaaggctgaagacactggacagatgaaatatgctggcata
tactacaactttgagctgttcagaattagagaaaaacagatcccagtggataaagtggaa
tgcaaagagaatgttttggcatttgcatgggagccgacaggaaacaagtttgcctttatc
cacggagagagcccccgtatttcggtttcgttctacattgtcaggccacagggaaaggtc
gactgcctcaaggtgtttgagcgccgtacagccaatcatctgttctggagtcccactgga
cagttcattgttctggcaggattgaggaatctgaatggtgttttcgagttcattgactct
gctgacatgacggtgatggcccaaacagaacatttcatggccactgacgtagagtgggac
ccaactggccgctacgtcatgaccggggtctcctggtggggtcataaggtggacaacggc
tactggctgtggtccttccagggacgcctgctgcaaaaacagcagctggatagattctgt
cagttgctctggcgaccacgccctcctacactcctgtctgtggatgatgttaaggagatc
aagaagaacctgaagaagttctcgcagcgtttcgaggcccaggaccgcctccggcagtcg
actgtgtcaacagagctgttggagaaacgtcgcaagctcatggacgactacgagaggtac
cgtgaacgtgtggaggatgaattcaattcccaaaaggaccgcagaattgccttcagaaat
ggtgtggacacagacgagctggataacctggctgaggctgactacgaggaggaggtgatc
gagttcctgctgaaagttgaagaaaccatcctcgacgaggagtag
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