Mya arenaria (softshell): 128213326
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Entry
128213326 CDS
T09995
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23-like isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maea03021
]
128213326
Transcription machinery [BR:
maea03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
128213326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
128213326
NCBI-ProteinID:
XP_052774891
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All DBs
Position
13:44558806..44599571
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AA seq
1372 aa
AA seq
DB search
MAEIDEKVAAQVSNSLSDVLQGEAVEEGFAGYIMHTPQSLQWKQDHNADIMTKLWANIPQ
ENHVSGLKVYANSYFDSRNVDRVDLLAGLLEAMAEKTVLQPKLICETLLDHDKMTHNNRK
SFIRTFKLIRKIVGGVDYKGCRDLLRMILQKQSIDSLNASSLPQVEAVTSVVSYILDRNA
CLLPSYLAVNEITKISVDVNNWPHWKMGKLLSDFVHSFKPVAQMVTISGRSHLLPVVGHS
VATNNVWRLNSKDLRFSLSGPLPYSKEIQEPQSGLLRYVLEQPYSRDMVGTMLGLNKQVK
QRCEVLEEQLVNLVVSAMEHADSGEGGMDPTLAHLLWQHLSSQLIYFVLFQFASFPHMVV
SLYEKLKDKKLSKIRETRDHLMWVLLQFISGSIQKNPLSDFLPVLKLYDLLYPDNSSIAV
PDISTASSTHTVAATCIWIHLNMKATSDNVQLQRPIPHALREHQEALGQLGQHLENLKQN
LANRSLPNNDYRIPLLCNAYSTNPQLFNLPMSILVESICGNNSKNTCFLPGNLVAAAPTQ
PLSMNLLDSLTVHAKMSLIHSIVSRVIRHAKNNKSTTALAPALVETYSRLLVYMEIESLG
IKGFISQLLPTVFTSQAWGILHTLLEMFSYRLHHIQPHYRVQLLGHLHTLSSMPMTNQNQ
LHLCVESTALRLITGLGSAEVQPQLSRIFSEPKATGFLSQDSEELNRVLVLTLARAMHVT
GSESFSSTWCKDILSAIIQSTPHSWPSHTTACFPACLNDFFKTTAIPREDKNSLKRNVDT
EYKKWRTMANENDIIAHFSMQGTPPLFLCIIWKSLIEDNRIQPIAYRVLERIGPRALSAH
LRTFCDFIVFEFCLAGNQNYFQRYIEAINDMIWKNNILTIDRLVLCLALRNLENNEARLA
FYIIYQILVRSTDFKNRVSDFLQNNTPDHWLQSNWHEKHMNFHKMYPEKFFYEGIQDLNS
PIQHQYLPVYFGNICLRFIPVLDILIHRLIEMLAVQKFLESILDNVGGLYKFHDRPITYL
YNTLHYYDSKLAGRAPLKRRLVNTIVLAHRDIHADHWFLTEDYQKYLQLSADSTNWIPEQ
DYYIRLIGRLVETIDGKSPFPNCDWRFNEFPNPAAHALHATCVELMALPVSSQAVGSAVL
DVVLKSSTQLPRDKLLGWINAVGLVLTALPETYWNVLNEKILEMIKSPMLMNMGGSFFEM
FDFMSCQSMFVENTCSYLVAVAHSVWHHAGIGQLSVLPQFVKEKVKPCVQAEEQFLFLLY
LIGPFLSRFNFERTRCLLDLTVEMYEILASIDKSCEHLHHMDIITDFLYHIKYMFVGDGV
KNDVDKVIRTLRPALQLRLRFISHTAIDETPVNTPREPLNPGGDNKQKYFAD
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaatcgatgagaaagttgccgcccaagtatcaaactctctgtcagatgtcttg
caaggtgaggcagtggaggagggatttgctggctacattatgcacacaccacagtccctg
cagtggaaacaggaccacaatgctgacatcatgaccaaactctgggccaacatcccacag
gaaaaccatgtgtcgggcctgaaggtgtacgccaacagttactttgacagccgtaatgtg
gacagggtggacttgctggcgggacttctcgaagcaatggctgagaaaactgtcctccaa
ccaaagttgatctgtgagaccctgctggaccatgacaagatgacgcacaacaacagaaaa
tccttcatccgcacattcaaactcatcaggaaaattgtgggaggagtcgattataagggt
tgtcgagatctgctgcgtatgatcctgcagaagcagagtatagactctctcaacgccagc
agtttgccacaagtagaggccgtcacatccgttgtgtcctacatcctggaccgtaatgca
tgcctgttgcccagctacctggcagtgaatgaaatcaccaaaattagcgtggatgtcaat
aactggcctcattggaaaatgggaaagcttttgtcagactttgtgcacagtttcaaaccc
gttgctcagatggtgaccatatcaggtcgctcccacttgctaccagttgttggtcactcc
gtggccactaacaatgtatggagactcaactccaaagatcttcgcttctccctcagtgga
ccactgccttacagcaaggagatacaggagcctcaaagtggtctgttgcgttacgtgctg
gagcagccatactcccgggacatggtcgggacaatgcttggcctcaacaaacaggtaaag
cagcggtgtgaggtactggaagaacagctggtgaacctggttgtgtcggcaatggagcat
gctgactccggagaggggggtatggaccccacccttgcacacctcctatggcagcacctc
tccagccagctcatatacttcgtactcttccagtttgcttccttccctcatatggttgtc
tccttgtatgagaagttgaaggacaagaagttgtccaagattcgggagacgagagatcac
ttgatgtgggtgctgcttcagttcatctcaggcagcatacagaaaaacccgctgagcgac
ttcctgccagtccttaaactgtatgacttgctctacccagacaacagctcaatcgcagtg
cctgacatatccacagcgagttccacacacactgtggcagccacatgtatctggatccac
ctgaatatgaaggcaacatcagacaatgtgcagctgcagcggccaataccacatgcactc
cgggaacaccaggaggcccttggacaacttggacaacatcttgaaaacctgaagcagaat
cttgccaacagaagtctacccaataatgactacagaatccccttgttgtgcaatgcatac
agcaccaacccacagctgttcaaccttcctatgagcattctggtggagagtatctgtggg
aacaacagcaagaacacatgtttcctgcccggcaatctcgtagcagcggcccctacccag
cccctttctatgaacctgctagactccctcacagtgcatgctaagatgtctctcattcac
agcattgtctcacgggtcatcaggcatgcaaagaataataagtccacgacagcattggct
ccagctcttgtagagacatacagtcgtctgttggtgtatatggagatagaatcactgggc
atcaaaggattcattagtcagctgctaccaactgtgtttacaagtcaagcgtggggcatc
ctgcacacactgctagagatgtttagttatcggcttcaccacattcaaccacactatcgg
gtgcagctactcggccaccttcacactctctccagtatgccaatgaccaaccagaatcag
ctccacctctgcgtggagagcactgcactccgcctcattaccggtcttggcagcgcggag
gtgcagccacaactttccagaatctttagcgagcctaaggcgactggtttcctgtctcag
gattctgaagaacttaacagagtattggtgctcaccctagctcgagccatgcatgttact
gggtcagagtctttttcttccacatggtgtaaagacattctctcagccatcattcagagc
acgccccattcttggccctctcacactacagcatgtttccctgcctgcctaaatgacttt
ttcaagactacagctattcccagggaagacaagaacagcctgaaacgaaatgtagacaca
gaatacaagaaatggcgcaccatggcaaacgaaaatgacatcattgcacacttcagcatg
caggggacaccgccattgttcctctgtatcatttggaagagcttgattgaggacaatagg
attcaaccaattgcctacagagtccttgagaggattggacccagagctctgtcagcccac
ttgcgaacattctgcgacttcatagtatttgagttctgccttgcgggaaaccagaactac
ttccagcgctatattgaggccatcaacgacatgatctggaagaacaatattctcacaatt
gatcggttagttttgtgtcttgccttaagaaatctggagaataatgaggccagactggct
ttctacatcatctatcagattcttgtcaggtcaaccgacttcaagaaccgtgtttcggac
ttcctgcagaataacacgccggaccattggctgcagagcaactggcatgagaaacacatg
aacttccacaagatgtacccagagaagttcttttatgaaggaatccaagacttgaacagc
ccaattcaacatcagtacctgccagtgtatttcggaaacatctgcctgaggttcattcct
gtgttggatatcctaattcaccggctcatcgagatgctagctgttcagaaattcctggag
agtatactggataatgttggaggtctgtacaagttccatgaccgtccgatcacctacctg
tacaatactctacactactacgactccaagctggctggtagggcaccattgaagagaaga
ctagtcaacacaattgtacttgcacacagagacatccatgcagaccattggttccttaca
gaggattaccagaagtacctccagctgtcagcagattcaaccaattggattccagaacag
gattactacattcgcctgattggtcgactcgttgagacaattgatgggaaatctccattc
cccaattgtgattggaggttcaatgaatttccaaacccggccgctcatgctttacatgct
acctgcgtggaacttatggccctcccagtgtcaagtcaagctgttggctcagcagttctc
gatgttgtcttaaaaagctctactcagcttcccagggacaaactccttggctggatcaat
gctgttgggcttgttttgaccgccctgccagagacatactggaatgtcctcaacgagaaa
atcttagaaatgatcaagagccccatgttaatgaacatgggaggcagcttttttgagatg
tttgactttatgtcatgtcaaagcatgtttgtggagaacacatgtagctatcttgtagct
gtggctcactccgtatggcaccatgctggaatagggcagctcagcgtgcttccacaattt
gtcaaggagaaagttaaaccatgcgtccaagccgaggagcagttcctattcttgctctac
ctgatcggacctttcttgtcaaggttcaacttcgagaggacacgctgcttgttggatctg
actgtagagatgtacgagattcttgccagcattgataagtcctgtgaacacctgcaccac
atggatattatcacagactttttgtaccacatcaagtacatgtttgtgggagatggggtt
aagaatgatgtagataaggtcatccgaaccctgaggcctgcactgcagctgagattgagg
tttatatctcatacggcaattgatgagacaccagtcaacactccaagagagcctttaaat
cctggaggggataataagcagaagtactttgcagattga
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