Mya arenaria (softshell): 128213478
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Entry
128213478 CDS
T09995
Name
(RefSeq) low-density lipoprotein receptor-related protein 8-like isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
maea04131
]
128213478
Membrane trafficking [BR:
maea04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
128213478
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
EGF_CA
SGL
cEGF
FXa_inhibition
EGF
Motif
Other DBs
NCBI-GeneID:
128213478
NCBI-ProteinID:
XP_052775177
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Position
13:complement(14432157..14444846)
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AA seq
907 aa
AA seq
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MHLVELARILLLFVGIVVQCQALDCGYGQMECTDGEKCVPLSWKCDGDADCSDKSDENSC
PAKTCAETEFPCSVNGTCIPSKWKCDGEPDCENGEDEDSKMCKGHQECEGTQFYCATDKQ
CIDTEWLCDGVPDCTDNSDESNCTATDRCGDSMFTCDNKQCISSQWECDGDKDCLDGSDE
SESKCAAKSCDPEKEFMCADGKRCIDIPWRCDGDFDCNDHSDENCTGVTPSEVEVCDPSS
EFQCVASGECIHNSWKCDGDPDCTDGSDEGEDSGCVYTCTEDEFMCDNKVCITKTLTCDH
NNDCMDGSDENNCTAVWQKTCQESGGFDCYNDGTTCISIEEVCDGIAHCKNAQDETSALC
KPNIEGNATVKQPCSHKTCMEHADCLTRTVNNTFVGECVCKTGFQMNDGACKDIDECKEE
GMCSQVCVNTKGGYHCSCQEGYILMRHTECRAESHPWLLFANRKDIRRLRADNTFMDIVV
DSTSNSVGIDVDHEEKYLFWTDGAEEVIKRANINHDQTGMMTGQDVMVIVGKEGNQAFSS
DGIAVDWLFKRIYWTDYQADKIMVADYNGANKHAVITTGLSDPRAIALDPEYGQMYWTDW
NKDAKIEMCGMNGVCPKRSENALTKVGSVHLGWPNGLTIDYVSRKVYWIDAKLHKIGSAD
MDLKNPRFIFEDAKDIQKPFAIAVFEDSLYWTDWTTNSIRSVHKVTGLNPKTLNLGSYSV
MDIKVYHPLKQNRSSAALIKQLCEERKCGDMCFPMPRDATKDLNVECVTSCPDTNIIGTN
CTHEPRPTTKAPEPTKAPTSQPGPVTTNKSGYTVVAGSTESIDHPVTPEAKGNGTIAIVA
GSIIAGVIILAFVVGVLIYRRYKANNKKILNFDNPVYRKTTTKDDDMIHIRANEPERENL
TNPDEIV
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttgtggaactagcaaggatattactgctgtttgttggaatagtggttcaatgt
caagcattggactgtggatatggtcagatggaatgtactgatggagaaaaatgcgttccg
ttgagttggaagtgtgatggggatgctgactgttcagacaagtccgatgagaacagctgt
cctgccaaaacgtgtgcagagaccgagtttccgtgctcagttaatggcacctgcatccct
agcaaatggaaatgtgacggtgaacccgactgtgaaaatggtgaagatgaagattcaaaa
atgtgcaaaggacaccaagaatgcgaagggactcagttctactgtgccacagacaagcag
tgtattgacaccgaatggctctgcgatggtgtgccagattgcactgataactccgatgaa
agcaactgtaccgctactgatcgctgtggtgatagcatgttcacatgtgacaacaagcag
tgcatttcaagccagtgggagtgtgatggggacaaggactgtttggatggctccgacgaa
tcagaatcaaaatgtgcagccaaatcatgtgacccagaaaaggagttcatgtgtgctgat
ggaaagcgttgcatcgacattccatggcgttgtgatggcgactttgactgtaatgaccac
agtgatgagaactgtacaggtgtaactccttcagaagtggaagtgtgtgatcccagctca
gagtttcagtgtgtggcttctggagaatgtatccacaactcttggaaatgtgatggggac
ccagactgtactgatggctcagatgaaggagaagattctggttgtgtctacacttgcaca
gaagacgagtttatgtgtgacaacaaggtgtgcattacgaagaccctgacctgtgaccac
aacaatgactgcatggatggctcggatgaaaacaactgcactgccgtttggcaaaaaacc
tgccaggagagtggtggttttgactgttacaatgatggaaccacgtgtattagcattgaa
gaagtttgtgatggcatagctcattgtaaaaacgcccaggacgagacttctgctctttgc
aaaccaaatattgaaggaaatgcaactgtgaaacagccatgcagtcacaaaacgtgtatg
gagcatgctgattgcctcactaggacggttaacaacacatttgtgggcgagtgcgtatgc
aagacgggtttccagatgaatgatggtgcatgcaaggacattgacgagtgcaaggaggag
ggcatgtgttcccaggtgtgcgttaacacgaagggaggataccactgcagctgtcaagag
ggctacattctcatgaggcacacagaatgcagagcagagagtcacccctggctactgttc
gcaaacaggaaggacattcgtcgtctgcgtgctgacaacacctttatggacatcgttgta
gattccacctccaacagtgttggcattgatgtagatcatgaggagaaatatttgttctgg
actgatggggctgaggaggtcatcaaaagggcaaatatcaaccacgaccaaactggcatg
atgacaggtcaggacgtcatggtgatagttggcaaagaaggcaaccaggctttttcctct
gacggtattgctgtggactggcttttcaagcgaatctactggactgactaccaggcagat
aagatcatggttgcagactacaacggagccaacaagcatgctgtaatcaccacagggctg
tctgaccccagagctattgcccttgatccagaatatggacaaatgtactggactgactgg
aacaaagatgccaagattgaaatgtgcggtatgaacggcgtgtgccccaagaggagtgaa
aatgccctcacgaaagttggaagtgtgcatctcggctggccaaatggactcacaattgat
tatgtgagccgcaaggtgtactggatcgatgccaaactgcacaagattggtagcgctgat
atggatctgaaaaatccccgctttatctttgaggatgcgaaagacatccagaagccattt
gccatcgccgtgtttgaggattccctctactggacagactggaccaccaactccattaga
tctgtacacaaggtcactggtctcaaccctaaaactctcaaccttggatcttactctgtc
atggatatcaaggtctaccatccgctcaagcaaaacagatcatcagcagcattaatcaag
cagctttgtgaggagaggaagtgtggcgatatgtgtttccccatgccccgcgatgccaca
aaggacctcaatgtggaatgtgtcaccagctgtcccgataccaacatcattggcactaac
tgcacccacgagcctagaccaacaaccaaagccccagaaccaaccaaagccccaacatcc
cagccagggccagttaccaccaacaagtcgggatacactgttgttgctgggagcaccgaa
tccattgatcatcctgttacaccagaggccaaaggaaatggaaccatcgctatcgttgca
ggaagcatcattgctggtgttatcattctggcatttgtggttggtgtattgatctacaga
cgatacaaggccaacaacaagaaaatcctcaactttgacaaccctgtctataggaaaaca
accactaaagatgatgatatgatccatattagagctaatgaaccagagagagaaaacttg
accaacccagatgaaattgtttga
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