Mya arenaria (softshell): 128213510
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Entry
128213510 CDS
T09995
Name
(RefSeq) RNA helicase aquarius-like
KO
K12874
intron-binding protein aquarius
Organism
maea
Mya arenaria (softshell)
Pathway
maea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128213510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
maea03041
]
128213510
Spliceosome [BR:
maea03041
]
Complex B
Other components
Prp19-related factors
128213510
Complex C
128213510
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
DEAD
UvrD-helicase
SLFN-g3_helicase
AAA_16
UvrD_C_2
AAA
PhoH
AAA_22
NB-ARC
DnaB_C
Parvo_NS1
ABC_ATPase
nSTAND3
Motif
Other DBs
NCBI-GeneID:
128213510
NCBI-ProteinID:
XP_052775236
LinkDB
All DBs
Position
13:complement(63277867..63319137)
Genome browser
AA seq
1398 aa
AA seq
DB search
MSEAVAKAPVPGAKVQSGPKGVGTLTVEQIQEDRITQLAAELWSQEAMKSGPTFRPEIVE
EVYEKELVSSNFSTKRIMMLEFSQYLENYLWPNYVPEKSTDSHIMSTILIVNEKFRERVP
PWACFKKKPEHFGGMFYRVLQMTLGSSRSLREQKFLIVFLIHCFRSIELDLLREQVQRLV
SLPIWTCLLQGKRDELFKSNPKYKKFFNFIKKSDAKLDPEQRQKVEFERTYLHNVIKKYI
DILNSIPEKGDVPTEKVMYCERFVEFLIDIEAQLPTRRFFNDLMADTHVLTISLLSNLAR
REDGTLFTELLEMLKVYAEFEIDEGTGEALTVHDRIDKHYDRVLALQKVAFKHFPDLHQF
AITNVASVDTRQALEKYFSPLSANALHEVLYRINMLPALDDGQESPFDKNFMLELLIREH
ERKKSQLEQINEMPLYPTEDVIWDENIVPTEYYSGEGTLALPKINLQFLTLHDYLLRNFN
LFRLESTYEIRQDIEDAVSHMKPWQAEDGSAYFGGWARMAQPIAGFSVVEVAKPHVGENH
PAQVRADVTLTLSVVPSIKAEWEGLRKHDVAFLITVRPTSKIGTKYDYRSPFIPQVGLMY
VRGCEIEGMLDAEGKVIEEGPEPKPELSGEMRTFRVWLDPNQYQHDMAATEDGQQDVYET
FNVLMRRKPKENNFKAVLETIRDLMNTDCVVPDWLHDLILGYGSPDSAHYSQLENNYRTL
DWNDTFLSMEHLYQSFPGYNIDVSTTDTSKQVAPFRLTFSQEEGSGKRKEGEEGPAPVKK
IYVEPHVIPNRGPYPYSMPKKNSIPFTPTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQI
ISNIYHNFPDQRTLIVTHSNQALNQLFEKIMALDIAERHLLRLGHGEESLETEKDYSRYG
RVNYVLAQRLELLQEVQRLQESLKVAGDVSYTCETAGYFFIYQVLARWEEFLANIRKLKD
RTAEKVKELFPFSEFFKNAPPPVFKGRSYAEDMDIAEGCFRHIKKIFTQLEEYRAFELLR
SGSDRADYLLIKEAKIIAMTCTHAALKRRDLVNVGFKFDNIMMEEAAQILEIETFIPLLL
QNPEFKSNRLKRWIMIGDHHQLPPVIKNMAFQKFSNMEQSLFTRLVRLGVPTVDLDAQGR
ARASIASLYTWRYKKLGSLPHVFTYSEYKLANAAFAFDYQLINVEDFNGQGESEPNPYFY
QNLGEAEYVVAMFMFMRLMGYPAEKISILTTYNGQKHLIRDVIQQRCSKNPFIGRPYTVT
TVDRYQGQQNDYILLSLVRTRTVGHLRDVRRLVVAMSRARLGLYVFARVSLFSNCFELTP
AFNRLCSRPTELHIDPNENFPTARKADEPCQRPPMVIQDMPHMAQFVFDLYNQKVDTLMR
IRNLPSAGKLSEPPKKKT
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagcagtagccaaagcaccagtcccaggtgcgaaggtacaaagtggacctaaa
ggggtcggcacgttgactgtggaacagattcaggaagacagaattacacagttggcagct
gagctatggtcacaagaggcaatgaaatctggaccaacattcagaccagagatagttgag
gaggtctatgagaaagagctggtctcttcaaacttctcaacaaaaagaatcatgatgctg
gaattcagtcaatatttagagaactacctatggccgaactacgttccagaaaagtcaact
gacagccacataatgtcgacaattttgattgtgaatgagaagttcagagaaagagtaccc
ccatgggcatgttttaagaagaaaccggaacattttggcggaatgttttaccgagttcta
cagatgacgctgggaagctctcggtctctacgagaacaaaagttcctcatcgtgttcctg
atacactgcttcagaagcatcgagctggacctgcttcgggaacaagtacagaggctcgtg
tccctgcctatatggacatgtctccttcagggtaaacgagatgagcttttcaagtccaac
ccaaagtacaagaagttcttcaactttatcaagaagagcgacgcaaaacttgaccctgaa
cagcgacagaaggtggaatttgagagaacgtatcttcataatgtcatcaagaaatacatc
gatattctcaactcaataccggagaaaggtgatgtccccacggagaaggtgatgtactgc
gagcgatttgttgagttcttgatcgacatcgaggctcagttacctacgcgccggttcttc
aatgacctcatggctgacacccatgttttgacgatctctttgttgtcaaatctggcacgt
cgtgaggacggtacactgttcacagagctgttggagatgttaaaggtgtatgctgagttt
gaaattgatgaggggacaggggaggcccttaccgtccatgatcgcatcgataagcactat
gatagggtcctagcgctacagaaagttgcgttcaagcacttcccggaccttcaccagttt
gcaatcacaaatgttgccagtgttgatacaagacaggccctcgagaaatacttcagccct
ctcagtgcgaatgctctgcacgaggttctctatcgcatcaacatgttacctgccttggac
gacggccaagaatcaccatttgacaagaactttatgcttgaactgctgatccgtgaacat
gagcgcaagaagtcacagctcgaacagatcaatgagatgccgttgtatccaacggaagac
gtcatttgggatgagaatattgtgccgacagagtattatagtggggaaggtacacttgcc
ctaccgaaaatcaacctccagtttctaacgctacacgattacctgctgaggaacttcaac
ctgttcagattggaatccacgtacgagattcgacaagacattgaggatgcagtatcacat
atgaaaccatggcaagcagaggatggttcagcatatttcgggggatgggctcgcatggcg
caaccaatcgctggcttctctgttgtagaggtagcgaagcctcatgttggagaaaaccac
ccggcccaagtgcgagcagacgtcaccctcactctcagtgtggttcccagcattaaggct
gagtgggaaggtctgcggaaacatgatgtagcttttttgatcacagtgcgcccgacaagt
aaaatcgggacaaagtatgactatcggtccccattcataccgcaggttggactcatgtac
gtccgcgggtgtgagattgagggtatgctggacgcagaggggaaggtcattgaagaaggt
cccgaaccaaagcctgagttatcaggagagatgagaacgttccgtgtttggctcgaccca
aaccagtaccaacatgacatggctgccactgaggatggtcagcaggatgtatatgagacg
tttaacgttctgatgcgtcgtaagccgaaggagaacaacttcaaggccgtgctggaaacg
atacgcgatctcatgaacacagactgtgttgtgccagactggttacatgatcttattctc
ggatatggaagtccagactccgcacactactcacaactggagaacaactaccgaaccctg
gactggaatgacacttttctgtccatggaacacttgtaccagagtttcccgggctacaac
attgatgtctcaacgaccgacacgagcaaacaggtggcccctttccgtctgacgttctcg
caggaggagggcagtgggaaacggaaggagggagaggaggggccagcccctgtcaagaag
atttacgttgagccccatgtgattccaaataggggaccttacccatacagcatgccaaaa
aaaaacagcataccgtttacgccaacccagattgaagcaattcgggcaggaatgcagccg
ggcttgacaatggttgtggggccgccgggaacgggtaaaaccgatgtggcagtacagata
atctccaacatttatcacaactttccggaccagagaactctcattgtcactcactctaac
caggccttgaatcagctgtttgagaagatcatggcgctggacattgctgagcgacatctg
ttacgtctgggacacggggaggaatctctcgagacagagaaggattacagtcgatacggg
cgcgtaaactatgtcctggcacagaggctggaattacttcaggaggtacagcgcttacaa
gagagtttgaaggttgctggcgatgtatcatacacatgtgagacagctggctatttcttc
atatatcaggtccttgccagatgggaggaatttctggctaatatcagaaaactgaaggac
aggacagctgaaaaggtcaaggagttgtttcccttctcagaatttttcaagaacgcccct
ccccctgtgtttaaggggcggagttatgctgaggatatggacattgccgagggatgcttc
cgtcacatcaagaaaatcttcacgcaactggaggaatacagggcttttgagttgttgcgt
agcggttctgatcgagccgactatctattgatcaaggaggcaaagataattgccatgacg
tgtacacacgcggccctgaaacgacgagatcttgtcaatgtgggattcaagtttgacaac
atcatgatggaagaagctgctcagattctcgagattgaaacattcatcccacttctcctg
cagaaccctgagttcaagagcaatcgactgaagcgctggattatgattggtgatcaccac
cagttgccgccagtgataaagaacatggcttttcagaagttctccaacatggaacagtct
ctgtttacacgccttgtacggctgggagtgccgactgtcgatctggatgctcaaggacga
gcaagggcaagtattgcatcactgtacacgtggagatacaagaaactgggcagcctccct
catgtattcacatactcagaatacaagctggcgaatgcagcctttgccttcgactaccag
ctcatcaatgtggaagacttcaatggtcaaggcgagtcagaacccaacccttacttttac
cagaatcttggagaagcggagtatgtggttgcaatgttcatgtttatgcgtctgatggga
tatccggccgagaagatctccatcctaaccacatacaacggacagaaacatctcatccgt
gacgttattcagcaacgctgttcgaagaatccattcattggaaggccttatacagtcaca
acggtagacaggtaccaaggtcaacagaacgattacatcctgctttccctcgtgagaaca
cgcacagtaggccatctcagggatgttcgacgtctggtggtcgccatgtctcgtgctcgt
cttggtctctatgtgtttgcccgagtctcattgttcagcaactgtttcgagcttacgcca
gccttcaacaggttgtgttcacggcctactgagcttcatatcgacccgaatgaaaacttc
cctaccgcaagaaaggcagatgagccatgtcaaagaccaccaatggtgatacaggacatg
ccacatatggcgcaatttgtgtttgacctttacaaccagaaggtcgacactcttatgcgg
atacgcaatctgccatcggctgggaagttatctgaaccacccaaaaagaagacctga
DBGET
integrated database retrieval system
