Mya arenaria (softshell): 128213567
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Entry
128213567 CDS
T09995
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
maea
Mya arenaria (softshell)
Pathway
maea03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128213567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maea03021
]
128213567
03036 Chromosome and associated proteins [BR:
maea03036
]
128213567
Transcription machinery [BR:
maea03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128213567
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
128213567
Chromatin remodeling factors
BAF complex
128213567
PBAF complex
128213567
GBAF(ncBAF) complex
128213567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
BRK
HSA
ResIII
QLQ
DEAD
Motif
Other DBs
NCBI-GeneID:
128213567
NCBI-ProteinID:
XP_052775384
LinkDB
All DBs
Position
13:complement(7134651..7166315)
Genome browser
AA seq
1763 aa
AA seq
DB search
MASGDGSPMTTPPPGPAYTPENIQRMQQNIKMDDKGMPNTQQQQQQYGHMQRPGGMHPQA
MQGGPQQGMHGPPQVMQGMGGGMQGSQGGPQNMQGGSVMGPGMQGQGMQGPQGMQGGPQG
MQGGPGMSGGMQGSQGGPQSMQGGPQGMQGGMQGPQGGPQNMQGGSQGMQGGQQGMQGPQ
NMPSGSQNVPGQQSVQGGPQQGMGNMHPQQIQGGNMGPVPNMSNPAMGGPNMTAPGGPAM
GRPGMQGQGQGMQGQNMGPSGYNPAMMGGNQGGPNQNMQQAQGMNQPTGQNMGQGPSPHM
SSNMGSPGSAGSMSRPSSSGPDGQHMGMQGQNQPGSASNMDGASFNQGMSRSMGPTPMNQ
MHQGGNQMVGQGMMPGNMPQNQMPNQPMRNQNFNPSQLHQLRAQIMAYKLLARSQPIPDP
LRQTLEGKRQFQPPMPRPQDGQSAGPTQGMRMGPPPQQLPPQSQASGVPPMSSQPTSQAV
SPGPQPTPPTSQAGPSTTPPQQKLGPGGGPPNTSMQAMMTMQSRQNRIAPVAKPVGLDPI
ELLNERENRIAARISSRIKELQGIPATLSDDMKTKATVELRALRLLNFQRQLRQEVVACM
RRDTTLETALNFKAYKRGKRQTLREARSTEILEKKQKMEQERKRRQKHQEYLTAVLQHAK
EFKEFHRSVVSKVSKLNKAILMHHMNTEREQKKEQERLEKERLRRLMAEDEEGYRKLIDQ
KKDKRLMYLLQQTDEYIESLTNLVEQHKIEQKKKFRKKKKKKSEAEDVVGVRVPVIEKAT
GKILTGEEAPLSSELVEWLAANPGYEVAPKEDEESGESGEEEEDEEEPATLFYDENKEQA
EKKEGPETAGVHDDEYMSKQNYYGQAHEIREIVTEQASILVNGKLKEYQIKGLEWMVSLY
NNNLNGILADEMGLGKTIQTIGLITYLMEKKKVNGPFLIIVPLSTLSNWMLEFEKWGPSV
LKVPYKGSPQARKVLGQQLKGGKFNVLLTTYEYVIKDKAILSKIRWKYMIIDEGHRMKNH
HCKLTQILNTYYIAPFRLLLTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFAM
TGEKVELNAEESLLIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYVIKCDMSSLQRVIYR
HMQNKGVLLTDGSEKDKKGRGGAKILMNTIMQLRKICNHPFMFHHIEEAFSEANGIAGVV
TGPDLYRVSGKFELLDRILPKLRALKHKVLLFSQMTSLLSILEDYFLFRGYRYLRLDGTT
KADDRGELLSLFNKEDSPYHIFILSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRA
HRIGQQNEVRVLRFCTVKSVEERILAAARFKLNVDEKVIQAGMFDQKSTGYERQTFLKNL
LTQDLESDERCSEPIDSDGSKTLIQEEDEVPDDETINQMLARSEEEFEIYQRMDVERRRE
EAKAVPRKPRLMEESELPAWIVKDEAEVERMTMEEEEEKLFGRGSRQRKEVDYSDALTEK
QWLRAIEDGNIDELEEEDEKPERKKAARKRKKPSETPPPKASGSGDPPIKKRRGRPPAEK
LKPNSPKVEAQLKKLLDIVLRYKDSDGRLLSGAFEKLPSKKELPEYYEIITNPLDFKKIR
KRIKDHKYRCLEDLEDDIFTLCQNAQLYNVEGSQIYEDSIVLQSVLTNAKERMTKDSSDS
SDDSSDDDSDDSTDDSSAGDETDTQSTSTTRSKNKDRDKSRDKSKSSKSGSKTPTPTSKR
STPSRASTKRPVISDEDEDEDED
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaggggacggtagtcctatgaccacgccccctcctggccctgcctacactcca
gaaaacattcagcgaatgcaacagaacataaaaatggatgacaagggaatgcccaacacg
cagcagcagcagcagcagtatggtcacatgcaacggcctggtggcatgcaccctcaagcc
atgcagggaggccctcagcagggaatgcatgggccaccacaggtcatgcaaggcatggga
ggggggatgcaaggttctcaaggcggtcctcaaaatatgcagggaggctcggtcatgggg
cctggcatgcaaggccaaggaatgcaagggccacaaggcatgcaggggggtccccagggg
atgcaaggaggccctggaatgtctggtggaatgcaaggatcccagggaggccctcagagt
atgcagggaggcccacaaggaatgcaaggaggcatgcagggaccccaaggagggcctcaa
aacatgcagggaggctcacaggggatgcaaggaggccaacaaggcatgcaagggcctcaa
aatatgccaagtgggtctcagaatgtgccaggacaacaaagtgtgcaaggtggcccacaa
caaggaatgggaaatatgcatccacaacaaatacagggtgggaacatgggtcctgtgcca
aatatgagcaacccagccatgggaggtcccaacatgacagctcctggaggccctgcaatg
ggaaggccaggaatgcaaggccaaggccagggaatgcaaggccaaaacatgggaccaagt
ggctataacccagcaatgatgggaggaaaccagggtgggcccaaccagaacatgcaacag
gcacaggggatgaatcagccaacgggacagaacatggggcagggtccaagtccacacatg
agttcaaacatgggttctccaggcagtgcaggcagcatgagtcgcccttctagcagtggg
cctgatggtcaacacatgggcatgcagggtcaaaaccagccaggttctgcatcaaacatg
gatggtgcaagcttcaaccaaggcatgagtcgaagcatgggacccactcccatgaaccag
atgcaccagggaggtaaccagatggttggacaaggcatgatgccaggaaatatgccacaa
aatcagatgcccaaccagccaatgaggaaccagaatttcaacccctcccagctgcaccag
ctgcgtgcccaaatcatggcctataagctgctggcccggagccagcccattcctgaccca
ctgagacagacactcgagggcaaaagacagttccagcctcctatgccgaggcctcaagat
ggtcagtcagctgggcctacgcagggtatgagaatggggcctccccctcagcagcttcct
cctcagtctcaggcttcaggagtacctccaatgtcaagtcagcccacaagccaggctgtt
tcaccaggaccacagcccacaccgccaacatcacaggctggtcccagcacaacccctccc
cagcagaagttgggcccaggaggtggtcctcctaacacatcgatgcaagctatgatgacc
atgcagtcccgccagaacaggatcgctcctgttgcaaaacctgttggccttgaccctatt
gagcttctgaatgagcgggaaaacaggatagcagctcgtatttcctcccgcatcaaggag
ctgcagggcattccagccaccctctcagatgacatgaagaccaaggctactgttgaactg
cgagctctcaggctcctcaacttccagagacagttacgtcaggaggtggtcgcatgtatg
aggcgagacacgacgctggagacagctctgaacttcaaggcctacaagcgtggcaagcgg
cagaccctgcgggaggctcgttccacagagatactagagaagaaacagaagatggaacag
gagagaaaaagacggcagaaacaccaggagtacctgactgccgtgcttcaacatgccaag
gagtttaaggagttccaccgctctgttgtctctaaggtgtccaagcttaacaaggccatc
ctcatgcaccacatgaacaccgaacgcgaacaaaagaaggaacaggagaggcttgagaag
gaacgtctacgcagacttatggcagaggatgaggagggataccggaagctgattgaccag
aagaaggacaagcgtctcatgtacctgctacagcagacagacgagtacattgagagtctt
acgaaccttgtagaacaacacaagattgaacagaagaaaaagttccgcaagaagaagaaa
aagaagagtgaggcggaagatgttgttggtgtacgtgtgccagtcattgagaaggccacc
ggcaagattctcacgggagaggaagcacctttgtccagcgaacttgtagaatggcttgca
gccaacccggggtacgaggtagccccgaaggaggatgaagagtcgggagaatctggtgag
gaggaggaagatgaggaggagccggcaacacttttttacgacgaaaacaaggagcaggcc
gagaaaaaggagggaccagaaacagctggggtgcatgatgatgaatacatgagcaaacag
aactactacggtcaggcccacgagatccgggagatagtcacagagcaggcttctatcctt
gtcaatggcaaattaaaggaataccagataaagggtttagaatggatggtgtcactgtat
aacaataacctgaacggcattctggctgatgagatgggtctgggtaagaccatccagacc
atcggcctgataacttacctgatggagaagaagaaagtgaatggtcctttcctcatcatt
gtgccattatcgacgttatcaaactggatgcttgagtttgagaagtggggtccgtccgtg
ctgaaggtcccatacaagggttccccccaggcccgtaaggtgcttggccagcaactgaag
ggggggaagttcaacgtcctccttaccacatatgagtatgtcatcaaggataaggcaatt
ctatccaagattcgctggaagtacatgatcattgatgagggtcaccgtatgaagaaccac
cactgtaagctcacccagatcctcaacacatactacatcgcccccttcaggctgctactt
accggaactccactacagaacaagttgccagagttgtgggccctgctgaactttctgtta
cccagcatcttcaagagtgtgagcacgtttgaacagtggttcaatgccccgtttgctatg
actggggagaaggttgagttgaatgcagaagagtcactcctgatcatccgtcgtctccat
aaggtgttgagacctttcctgctccgtagactgaagaaggaggtggaatctcagctccca
gataaggtcgagtatgtgatcaagtgtgacatgtcatccctccagagggtcatttaccga
cacatgcagaacaagggtgtcctgcttacggatggctccgagaaggacaagaaggggcgt
ggaggagctaagatccttatgaacacgatcatgcagctgaggaagatctgtaaccatcca
ttcatgttccatcacatagaagaggcattttctgaggccaatggcattgctggtgtcgtc
actggccctgacctgtaccgcgtgtccgggaagtttgagctgcttgaccgtatcctgccc
aagctgagagccttgaagcacaaggttctgctcttctcccagatgacctctctgctctcc
atccttgaggactacttcctattcaggggatacagatacctcagacttgatggtacaaca
aaggctgacgacagaggtgagcttctctccttgttcaacaaagaggactcgccctaccac
atcttcatcctcagtacaagagccggaggactaggactgaacctgcagactgcagacact
gttgtcatctttgattcagactggaacccacatcaggacttgcaagcccaggatcgagcc
catcgtataggtcagcagaatgaggtgcgtgtgctgaggttctgtacggtgaagagcgtg
gaggagcgtatcctggctgccgcacgcttcaagctcaacgtggacgagaaggtgatccag
gcaggcatgtttgaccagaagtccactggctacgagaggcagactttcctgaagaatctc
cttacgcaggacctggagagtgatgagcgatgttcggaaccaatcgattccgatggtagc
aagactctaattcaagaggaagatgaggtaccagatgatgagaccatcaaccagatgctg
gctcggtcggaggaggagtttgagatttaccagcgcatggacgtggagcgacgacgtgag
gaagccaaggccgtgccacgtaaacctcgacttatggaagagtctgaactgcccgcatgg
atcgtcaaggatgaggctgaggttgaaaggatgactatggaagaggaagaagagaagttg
ttcggtcggggatctcgacagaggaaggaagtagactactctgacgcactcacagagaaa
cagtggctaagggctatagaggatggtaacatagatgagcttgaggaggaggatgagaag
ccagagaggaaaaaggccgcccgcaaacgcaagaagccctctgagacaccaccacccaag
gcctcaggctctggggacccacccataaaaaagaggcggggtcgaccaccggcagagaaa
ctgaagcccaactcgcccaaggtggaagcccagctgaagaagctgcttgacattgtgctc
agatacaaggacagtgatggccggttactaagtggtgcatttgagaaactaccttccaag
aaggagctgccagagtattatgagatcattaccaacccactggacttcaagaaaataagg
aagcgtatcaaggaccacaagtacagatgcctggaggacctggaggatgatatcttcacc
ctgtgtcagaacgcacagctctacaatgtcgaggggtcacagatctatgaggactccata
gtgctgcagtcggtgttgacgaatgccaaggagcgaatgacaaaggacagcagtgactcg
agtgatgactcctcagatgatgatagcgacgacagcactgatgacagtagcgctggtgat
gagactgacactcagtcaacatcgaccacaagatcgaagaacaaagacagggacaagtcc
cgtgacaagtcaaagtcgagcaagtccggtagtaagacaccaacaccaactagtaaaaga
agcacaccgtcccgggcgagcacgaagcgccctgttatcagtgatgaggatgaagatgag
gatgaggactag
DBGET
integrated database retrieval system
