Mya arenaria (softshell): 128213601
Help
Entry
128213601 CDS
T09995
Name
(RefSeq) FRAS1-related extracellular matrix protein 1-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
maea
Mya arenaria (softshell)
Pathway
maea04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128213601
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
maea04091
]
128213601
Lectins [BR:
maea04091
]
C-Type lectins
Lecticans
128213601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Calx-beta
Big_9
TrbC_Ftype
Motif
Other DBs
NCBI-GeneID:
128213601
NCBI-ProteinID:
XP_052775460
LinkDB
All DBs
Position
13:994407..1058373
Genome browser
AA seq
2172 aa
AA seq
DB search
MAVCWAVRNSVVSELCVLLLCLFPLLVRSGLVVRTNTVTVKIGRTEYLDPDDIVIKKMRK
GDEDCRIEVVQNDPITQRVGQLNPKIFDCDYQANTVHFSHSGSPFLAEDRVQLRVYRFTS
RKTVSETFYLNIKINNATNDIVVTRGLRHVIVPEFNGISNTIDTSVLFFNHSRSPNISCM
VSFNKLETNWPLVGRIIMGDQRTAVEAVQTTCQEFMYMELRYEHLQKPTPDVDYLVLNIE
LFDPQLSDELIKESYYLPIYIKNALLNSPPRSSYMSTYMNEVDQYILTTIIPGVISAEDY
ETPDNLLVYNITKPPDPDQGYFVHLDDPVMEITSFIQDDLDNHKIAYQPPNSTVSERRIY
EVEFKVFDSHFAESMPIVLHIAVRPATTDGPHVSINSGLVLLEGQSREISNSNFQITDGR
PEDVRLYVVGGLEHGRLLRDDRLALYFTIADINSDSLTYVHDDSESKTDRIDLKISDGKN
NIMAKFPIKIIPKDDSPPVVIRNLGMEINEGQTQRFDTAMLLATDADSVDSSIVYVIVQP
TDAGEIIRKARQADSGTRINRFSQRELVKGQIYYRHFGRENFHDEFRFTLRDQQDPPNES
GTETFYIAINPVNENPPQLSPAATRLMRVSETDIALITKTELEYTDTETNSDKLTYIITT
PPYFVYRGQSSTRNDAGRIIAMHNLTMVNKHASIPSVDTFKQEDINHLKIGYMPPMKDIG
SEPRLVRFMYTVQDSSGNKVLGQQFDIDVQPVNDKPPVFVTSRLLVEEGGILGMSTDHIS
AADADTHEADLTFTVEQVPDHGRLQKGGVNLEAEATFNMLDLRRKDLRYIHDGSEVTSDT
FTLSVSDVDNRVSKVFNIEVVPVDDVIPRVRDNLKPHLIVSEGSEAVILPTVLAATDGHT
EEAALVFLLVKQPKYGILQLRGEPATRFTQADVQRGDVHYIHTSGEIGPAPVWDSITFIL
SDLSFKTGAEPIQYSLNITITPVDNQTPIIIAGLPINVEEGRKFYFSPDYITVKDADTDP
TSVQFVITKQPQWGYLENIRTKPGSEKSKTGNPVTSFKLQDIIDNKIVYVQASHKGMEPT
RDFFDFYATDGKSNSLTQTANIRITPINDEEPVVMLNDFRVEEGGSKVIDKEMLDAMDMD
MPREEVRLYISQPPEYGDIVVLRRTPNGDVEATVTEFTAKELHNGMQLKYRHDDSENFMD
KFAITASDGKHEVKRVCNITILPRNDERPELLKNLGIQMDYGELVTLSSSVLQAVDLDNS
DDQVYYIVLTLPKKGVLQTCSIPNEPMISSNCRDIWVGQNFTQGDINHNLVRYLHTASIG
TSDYDTFLFALSDGINKRQVETFQIRIMNSKRATITLTNVEMSLREGERVAITTDKLSAE
DGSSRPGEIVFAIIRPPHLGQIEYLDSPLIPINSFTQQDLLSNNVVYNHLTKVDFTEDSF
TFTVANGHGDNKDTEFRFAITPVDIALPSLAVKELVEVLEGEEIPITAANLRVDDPDTDS
SNVTFHIVKQPTYGRLYNIGVHITGLFTQNAIDRGMITYESDGTHTGLDNFMFTLSDGKH
DGFLINGTLQDKPVICSIYIKPLVNDVPKLVTLEQPDSLELFEDGRYGFRVNNHVLKAVD
SDTMNTNLVYILEARPRHGHLENTQAKRYVRDRFTQRDLDEDTLQFIIDTADRETNDSFT
FRIQDAWGNKLEDQRMEFHWSFVELERTSLVVCENIGTLPVTLVRTGDVSSPAYVSIEVQ
DRSTRRNEDYHTTSSGQVQFESGVSSVSWDVRVIEDGITEGTESFVVYIQTPVNAILGKR
TKTRVRLINANNGECPQYLGMISKHQLAVPDELYLPGNAREPETETVLSPGSSSSRLGNQ
RHHHENALMDPAGTAVVDQYPEKAGNTVSDLTNDERRERRRKERKSKKERKKRRKKRKGG
RKGGKKPRPTEAAPAQEEEMAPEPPVDINAPQECTLTTEGLLYFSPTSQQMYKCNGAAWI
AWRQDSKDQQPETRECQQGWSKYESRCFKFINERLTWEVAEMLCQMSYGAHLATVRGDEH
IEWLGELGGKKAYWIGLNDVDQTGTWRYTNGESPTYFNWKGGVPRVKRAVHKKNCVIVDK
KRKMRNKPCGGRKARLICELDIGANDPSRAPPKRDVSSGGRSKNSKKKRNRSKERQSDAR
YSKKEKGFFFQR
NT seq
6519 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgtgttgggcagtgaggaattcagtagtgtcggaattatgtgttctcttattg
tgcttgtttccgctgctggtgcgaagtgggttggtggtacgaactaacacggtgacggtg
aagatcggccggacggagtaccttgacccggacgatattgtgataaaaaagatgaggaag
ggtgacgaggattgccgaatagaggtcgtccagaatgatcccatcactcagcgggtcggc
cagcttaatccaaagatattcgactgtgactaccaggcgaacacggtccacttttctcac
tctggttccccgttcctggccgaggaccgagtccaactccgagtctaccgcttcaccagc
cggaaaacagtgtccgaaacattctacctgaacattaaaataaacaacgctacaaatgac
attgtcgtgacacgtggtctgcgccacgtaattgtcccagaattcaacggtatttccaac
acaattgacacttccgttttattttttaaccacagcagatctccaaatatttcgtgtatg
gtcagttttaacaaattagagaccaactggccgcttgtgggccgaattatcatgggcgat
cagagaacggccgtggaggcggtacaaaccacgtgccaggaattcatgtatatggaactc
agatacgaacatttacaaaaaccgacccctgatgtagattatctagtgttaaacattgaa
ttattcgatccccaattaagtgacgaacttattaaagaaagttattatttacctatatac
atcaagaacgccttactgaactctcccccgcgctcttcctatatgagcacgtatatgaac
gaggtggaccagtacatcctcaccaccatcattcccggggtcatctccgccgaggattat
gaaacccccgacaacctactcgtgtataacatcaccaaaccgccggaccccgaccaggga
tactttgttcaccttgatgatcccgtcatggaaataacatcctttatacaagatgaccta
gacaaccataagatcgcctatcagccaccgaattccaccgtctctgaacggcgtatttac
gaagttgaatttaaagtgtttgacagccatttcgccgaaagtatgccaatagttctacac
atcgctgttcgcccagcaacaacagacggtcctcacgtgtcaataaactcggggttggtg
ctgctggaaggccaatcccgggagatcagcaatagcaatttccagataaccgacggcagg
cccgaggacgtgcgattgtacgtggtcggcgggctggagcacggacggctgctgcgagat
gaccgcctggcgctctactttaccatcgccgatatcaacagcgacagcctgacgtacgtc
cacgacgacagcgagtcgaagacggacaggatcgaccttaagataagtgacggtaaaaat
aacataatggcgaagtttcctattaaaattattccaaaagacgacagtccaccagtcgta
attcgaaacttaggaatggaaattaatgaggggcaaacgcagcgtttcgacacggccatg
ctgctggcaaccgacgctgattctgtagattcaagcatcgtttacgtcattgtacaacca
acggacgccggggaaatcattcgtaaagctaggcaggcggactccggtactcgtattaac
aggtttagccagcgggaactggtaaaaggacagatctattatcgacatttcggacgtgaa
aacttccacgatgagttcaggttcacattgcgtgatcagcaggatccaccgaatgagtcg
ggtacagagactttctacatcgccatcaacccggtgaacgagaatcccccgcaactttcg
cctgccgcaacgagactgatgcgggtctccgagaccgacatagcgctcatcacaaaaacc
gagctagagtacacagacacggaaaccaactctgacaaactgacatacatcataacaaca
cctccgtactttgtctacagaggccaaagctctacgcgaaatgacgccggtagaattatt
gcaatgcataacttgacaatggttaacaagcatgctagcattccgtctgtcgacacgttc
aaacaggaggacattaatcacctgaagatcggttacatgcctccaatgaaagacatcgga
tcggagccgcgcctcgtgcgcttcatgtacacggtgcaggactcgagcggtaacaaggtg
ctcggacagcagttcgacattgacgtgcagcccgtcaacgacaagccacccgtgttcgtg
acgtcacggttgctcgtagaggagggtggtatcctggggatgtcaacggaccacatctcg
gcggctgacgcggacacacacgaggcggaccttacgttcacggtggagcaagttcctgat
cacggccggcttcagaagggtggcgtgaacctggaggcggaggctaccttcaacatgctc
gacctccgaaggaaagatctaaggtacatccacgacggatctgaggtgacgagcgacaca
ttcacgctctccgtctccgacgtcgacaaccgcgtgtcgaaggtattcaacatcgaagtc
gtaccagtggatgacgtcataccgcgtgttcgggataacctgaagccgcatttgatcgtg
tctgaggggagcgaggcggtgattctacctaccgtcttggcagctacggatggacacacg
gaggaggcggcccttgtcttccttctcgtcaaacaaccgaagtacggaatcttgcagctg
cggggcgagccggctacacgtttcacgcaggcggacgttcagcgtggtgacgtccattac
atccacacaagcggtgagatcggacccgcccccgtttgggactctatcacattcatactg
tccgacctgtcatttaagacgggcgccgagcccatccagtacagtctcaacatcaccatc
acgcccgtggacaaccagacgccaatcatcatcgccggccttccaattaacgttgaagag
ggacgtaagttctacttctcgcccgactacatcacggtcaaggacgcggacaccgacccc
acttccgtccagttcgtcatcaccaaacaaccgcagtggggctacctagagaacatccgc
acaaagcctggctcagagaaaagtaaaactggcaaccctgtgacgtcattcaaacttcaa
gacatcatcgacaacaaaatcgtctacgtccaggcttcacacaaagggatggaacctaca
cgagatttctttgatttctatgccacagatggaaaatctaactctttgacacaaacagcc
aacataagaattacacctattaatgacgaggagccggttgtaatgctgaacgatttccgg
gttgaggaaggcggaagtaaggtgatcgacaaggagatgctggacgctatggatatggac
atgccgcgtgaggaggtccgcctgtatatatcacagcccccggaatacggggacatcgtc
gtcctcagacgcactcctaacggcgacgtggaagccactgtgaccgagttcaccgccaag
gagctgcacaatggtatgcagctcaagtacaggcacgacgattcagaaaatttcatggac
aagttcgcaatcactgcatccgatggtaaacacgaggtgaagagagtgtgtaatatcacg
atattacccagaaacgacgagcgcccggagctattgaagaatttggggatacagatggac
tacggcgaactagtaacgctgtccagctctgttctgcaggccgtagatcttgacaactcc
gacgaccaggtgtactacattgtcctcacactacccaagaagggcgtcctccagacatgc
tctattccaaacgagcctatgatttcaagtaactgccgggatatttgggtcggacaaaat
ttcacgcagggggatattaatcacaatctagtacggtatttgcatacggcaagcattggg
acctccgactacgacactttcctgttcgctttatcagatggaattaataaacgccaagta
gaaacattccaaattagaattatgaattccaaacgtgcaacaataacattgactaatgtt
gaaatgtctttgagagaaggagagcgtgttgctataacaacagacaagctaagtgctgag
gacggaagttcaaggccgggtgagattgtgtttgcgattatccgaccaccccacttaggc
cagatagaatatttggactccccgttaatacctatcaacagtttcacccagcaggatcta
ctctcaaacaatgtggtctataatcacttgacaaaggtcgacttcaccgaagactcgttc
acgttcactgtagccaacggacatggcgacaacaaggacactgagttccggttcgcgatt
actcccgttgacattgctctaccatcgttggcggtaaaagagctggtagaagtgttggag
ggcgaggaaatccccatcacggccgcaaacctgcgggtggacgacccggacacagacagc
agcaacgttaccttccatattgttaagcagcccacgtatgggcgtctgtacaacatcggg
gtccacattaccggtttgttcacgcagaacgccatcgaccgcggaatgatcacgtacgag
agtgacggcactcacaccggtctcgataacttcatgttcactctgagtgatggcaaacac
gatggctttctgatcaacgggactctccaggacaagccagtgatctgtagcatctacatt
aaaccgctcgtgaacgacgttccaaagctggtcaccctggagcagcccgactccctggag
ctgtttgaggacgggcggtacgggtttcgtgtcaacaaccacgtactgaaggcggtcgac
tctgacaccatgaatacgaacctggtgtacattttggaggcgcggccgaggcatggccac
ctagagaacacacaggcgaagcggtacgtgcgggaccggttcacgcagagagatctggat
gaggatacactgcagttcatcatcgacacagcggaccgggaaacgaacgacagcttcacc
ttccgtatccaagacgcttggggaaacaaactagaggaccaaaggatggagttccactgg
tcgttcgtggaactggagcgaacgagtctggtcgtctgcgagaacatcggtacacttccg
gtgacactcgttaggactggtgacgtcagttcacctgcctacgtgagcatcgaggtgcag
gaccgcagcacgcgcaggaatgaggattatcataccacctcgtccggacaagtccagttc
gaatcaggcgtttcgagtgtgtcttgggacgtgagggtgatagaagacggtatcacggag
ggaacagagagcttcgtcgtctatatccaaacacccgtgaacgccatcctcggcaagcgc
acaaagacacgtgtccgcctcatcaatgcaaacaacggcgagtgcccgcaatacctggga
atgatcagcaagcaccagctggccgtaccagatgagctatacctgcccgggaacgcgcgg
gaaccagaaacggaaaccgtcctctctccggggtcgagctcgtcgagactcgggaaccag
cggcaccaccacgagaacgccctcatggacccggctggcaccgccgtcgtcgaccaatac
ccggaaaaagctgggaatacagtatcagacttgacaaatgatgaacgtcgagaacgtcga
cgtaaagaacgtaagagcaagaaggagaggaagaagcgacgtaaaaagcgaaagggtggc
cggaaaggtggcaagaagccacgacccacggaggcagctcctgcacaggaagaagagatg
gctcccgagccacccgtagatattaatgctccacaggagtgcacgctgactacggagggt
ctgctgtacttctccccgacctcccaacagatgtacaagtgtaacggagccgcgtggatc
gcctggagacaggattccaaggatcagcagccggaaaccagggaatgccagcagggctgg
tccaagtatgagagccgatgttttaagttcataaacgagcggctgacgtgggaggtggcg
gagatgctgtgccagatgtcatacggcgcgcatcttgcaaccgtccgcggggatgaacac
atcgaatggctcggcgagctcggcggcaagaaggcttactggataggtctgaatgacgtc
gaccaaaccggcacgtggcggtacactaacggggaatccccgacctactttaactggaag
ggcggcgtaccacgagtgaagcgcgcagtccacaagaaaaactgcgtgatcgtggacaag
aaacggaagatgagaaacaagccgtgcggtggccggaaagcgcggctcatctgtgaactg
gacatcggggcgaatgaccccagcagggcgccgccgaagagagatgtctccagcggcggg
cgatccaaaaacagtaaaaagaaaagaaataggtctaaggaaagacagagtgacgccaga
tattcaaaaaaagagaaaggattcttttttcagagatag
DBGET
integrated database retrieval system
