Mya arenaria (softshell): 128213610
Help
Entry
128213610 CDS
T09995
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24-like isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
maea01002
]
128213610
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
maea04121
]
128213610
Enzymes [BR:
maea01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128213610
Peptidases and inhibitors [BR:
maea01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128213610
Ubiquitin system [BR:
maea04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128213610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
DUF3517
UBA
UBA_7
UBA_RAD5A
Motif
Other DBs
NCBI-GeneID:
128213610
NCBI-ProteinID:
XP_052775470
LinkDB
All DBs
Position
13:complement(39090165..39159133)
Genome browser
AA seq
2599 aa
AA seq
DB search
MESDEDHVQTLLSMGFPSELDIRKALRLAKNSLNDAVAILTNDHPTTSFDTLDDIEMKDL
AKGSTNPVYGPNLPSYSDSSETEKEMVEAMEDSSDAVQEEVNPYEFPVTNLYELEGRVFA
EHWSIPYKKEESLGKCLIAAANLAEAGLMDNDENCSRFVNRVMTESFQKLLTSNAVHRWS
TDIHEGIFNMLQLLVDLCVARLKQQPVHQLLMDILAMALNPECEFQYKNKGRRDRTNWEE
KLEDGEMYSRVVIDTYNKDPYGWLTGLINRFAWKGGFESIKNILESDELDAPVSQNHILS
IAALLKPLGMCAEYLNPEVVRKLLTTGMERSIQYVQKLEEKDFKEKKVGSVSDLLSSMKL
LCMKIWPTDTDSLDSLRLDIALRMLKSPHFNAKMNSLKEVTKLIEDATSTKNPRQKTAIP
QKQIQEWLVENKILSIALEGNIDQAQYCDKIKGIVDFLGTDLSSDELTMIWKMQISQTNN
VIDNIHSIIAAAAVKFDPNQLEHLVLLIQKKWQEENDKSREKLLSLIGKIGRDAKIPKTT
NQVLQLLWDLSHLPALSTHLVELALEEHLAILNDSYTVKDQVKRNYVSKCVDDIKKGVCV
LPTLKQLHQLSKNILKHSFKQDKGILHDLNKNFDIIKLVTQSLVKCHKQAVASVGDGQLD
HNTSVDGRYPHSEYVMSHLSFLQYVLQEGILYLPWNRAREIWATLVASSEACNWDRETCY
EWFSKGLMDLDNETQGKLFQNELLKMDFAKISEKGFECFKTYFENVNKNEHRLKKDPGGQ
VTVEKVELQGLDFLWELCLNTPDESIADAAIQLLLNVSYNNLTSRLKKDPVNLHKKFINE
CKTRLEMSVIGVSGTAISQAIFSATRTLTAPTVPEIATIAIPSKSIKLLNIERLLWIAET
YVLNVEETHTSPRTILPHGASFQGYQINLFITCEAPKQEFMLVCHSNESLGNVRTKIASR
LRHSSDNIQMVAQEKSYSTVLGANKDQKLLHQLDFEDSQTIQVRMVTPTSTATVKQEVQD
QPLNEQQTSLAPMSKQTFDLEQEKMLPGVIMAAGGQVFDMLYQLSELDETKITTRVRKLL
MLIPTDPAVIEVLDSISTRLPTLGSSDDLSPRSSPRKPAVSSPRNSPQETLKALFDCSSP
DMSAFRVLYNLEVLSCKLMPTVLDMGSKASSQAYFEDFLTAGGLSTVVNVLQPESLSQDI
HYGTRQGCYSVCLQLARYLLCGQTVTGELAFTPAREDLRPSSVGSAGGGAMVVPATPPPG
TPTILLHSLETRTAGSHAVQTMGVHDFTETVSCFMRVAWAAAAGKLHLLSSPQPIRENAT
AYSCGRRSRQSSTGSQGSTGSESDCSSLHGGVCVKQRFISAKDCNIAKEALEILVTCLQL
RSELIAAFYSLPCVSDFIIDILVGCSQTDIRSAAMDQFLLLSQTELLSPELGRGTQTPHQ
FLLQVILKAYLPFWVSSSATRGASQRLLSQCTQYFELRCKLLENLCSSDQALYQVEVPDM
LEDEVAWLGNFVPSEHPELKETDNLLLAGHLKLIRTLFTCDDISKEDYGKSLVHDLLRDF
LFPASKCMMDSMNGATTDLLLSEFNPRCSNTDSRVAAYELITELARGSLSNLQDVCRQLT
EMHHQPNVDCANEWEYLPPVDGRADCGYVGLRNGGATCYMNSVIQQLYMVPGIPEAVLSG
EEEDTVNEEGVYYQIQQVFGHLMDSRLQYHEPERFWKVFKLWGDPVNIREQQDAFDFFQA
LIDQIDEQLKKSKKEEVFKKKFQGIFTDQKICKDCPHRYEREEMFTALNLTVKNATLQDS
LDQFVKGELLEGDNAYYCEKCGEKRNTIKRMYIKNLPPTLCIHLKRFGYDWEANRALKFD
DYFKFPWVLDMEPYTAEGMARRDAAEEDKDGDEPLTPSPRPHADEGPAMEVSFSPEPRQI
NYELVGIVVHSGQANAGHYYSFIKERRGTVLNNNNKGKWFKFNDTVVEEFDMTDAAIEAE
CFGGTYKAKVYEQSNSYPEDRQRYWNGYMLYYERMDENKSSLSAKKSKIVTRKLWPDGML
RSNRSSDSFVELTELVHKGERRGIFMDKMPPSIQRLIHSENLTFIKNRDVYNQEYFRFVK
NLVARNTMSCKHPDYSDMCVVSLQLAVKFLFNLYFRTKKKSLEDLEEWVDVLDELVHRCK
PACRWLLDYLASEEGSTYIRPFLLECPSKDVRFSFAKILEKAMCCYLSEHGGVPTEKCVD
DIVEQLLSMLNKDVVDQCKHSVQYFLVLRSYVQLGTKAVSHMFMRNGFKRLAVFLLGQPS
SNGEHESTSSRRWSSVQSREFAHLQSTLATLILNCNVTHKRTIDIGDHKPYKPVMASPKT
LLKMSAEMEKYVFGPESTRYLKEIVQAVREVNCSLDAVCDMLYYCSFCNEAFSTTLLKQL
MMQYMTAPSNELKPVFSVLTDLLCLEDPLQLKRVQLVIDGHVDDHGQQFEGLLAVIRLNH
VQDSRRSYWCIKFLVNLVNRCSAVKNYLQQTMSKWQWAVNWLKKKMTEHNYWSATTSSVV
SNEDSNRKSFQRTVSAQDTLDEATALLSELENFPEMDTNGNTATSDSDTMATEDTPPSNQ
VDKPNTTEEKEEKKEGENS
NT seq
7800 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtgacgaagatcacgtacaaactttgctaagcatggggttccccagcgaactt
gacattcgaaaagctttgcgcctagcaaagaacagtttaaatgacgccgttgcaatattg
actaatgatcatcctactactagttttgacactctcgatgatattgaaatgaaagatttg
gcaaaaggttcaaccaacccagtgtatggtccaaatctacccagctacagtgacagttct
gaaactgagaaggagatggtagaagcaatggaagattcctcagatgcggttcaagaagaa
gtaaacccatatgaattcccagtaaccaacttgtatgagctagagggcagggtttttgca
gaacattggtcaataccttacaagaaagaggaatcactagggaaatgtttgatagcagct
gccaatcttgcagaagcagggctaatggataatgatgaaaactgttcaagatttgtgaat
cgagttatgactgagtcttttcagaagttgctgacttccaatgctgtacaccgatggagc
acggacatccatgaaggcatcttcaacatgctgcagctgctcgtggatctgtgtgtggcc
aggcttaagcagcagccagtgcaccagcttctcatggacatacttgccatggcgttgaac
ccagaatgtgagttccagtataagaacaaaggtcgtcgtgatcgaaccaactgggaggaa
aaacttgaagatggtgaaatgtactctcgagttgtcattgatacatacaacaaggatccc
tatggctggcttactgggctcattaataggtttgcgtggaaaggagggtttgaaagcata
aagaacatcctagaatcggacgagctcgatgctcctgtaagtcagaatcatatattgtca
atagctgccttgttgaagccgttgggtatgtgtgcggagtacctgaatcccgaggtagtc
cggaaattactcaccacaggaatggagcgatccatacaatatgtgcagaaacttgaggaa
aaggacttcaaggaaaagaaagtgggcagtgtatcagacctgctatcctccatgaagctc
ctgtgtatgaaaatctggcccaccgacaccgactccctggatagtctccggctcgatatc
gccctccgcatgctcaaatctccacattttaacgccaagatgaactcgctgaaagaggtg
acaaagttgattgaagatgctactagtaccaagaaccctcgtcagaagacggccatacct
cagaaacagatacaggagtggctggtggagaataaaatcctctccatagccctagaaggt
aacatcgaccaggcgcagtactgtgataaaatcaagggtattgtggatttcctgggaact
gacctgtcgtctgacgagctcaccatgatctggaagatgcagatttctcagacaaacaat
gttatagacaacattcactcgatcatcgctgctgctgctgtcaagttcgaccccaaccaa
ctggaacatctggttcttcttatccaaaagaaatggcaagaagaaaatgacaaatccagg
gaaaaactgcttagcctgattggaaaaattggcagagatgcaaaaataccaaagactaca
aatcaggttctacagttgctatgggacctttcccacttgccagccctctccacccatctg
gtggaactcgcgctggaagaacacctcgcaatcctcaatgactcgtacacggtcaaggac
caggtgaagcggaactacgtctccaagtgtgttgatgacattaagaagggtgtatgcgtc
cttccaacgttgaaacagttgcaccagttgagcaaaaacatcctaaaacacagctttaaa
caagacaagggaattctacatgatctgaacaagaactttgacatcatcaagctggtcact
cagagtctggtcaagtgccacaagcaggctgtggccagtgtgggggatggacagctggac
cacaacacttcagtggatggtcgatacccacactcagagtatgtgatgtcgcacctgtcg
ttcctgcagtatgtgttacaggaagggattctctacctgccctggaatcgggcacgggaa
atctgggctacactggtcgcctcatcagaggcttgcaactgggacagggagacatgttac
gagtggttctccaagggactaatggatcttgacaatgaaacccagggaaaactcttccag
aatgagctgctcaagatggactttgccaaaataagtgaaaaaggttttgagtgtttcaag
acatacttcgaaaatgtgaacaagaatgaacatcgtttaaaaaaggaccctgggggtcag
gtcacagtggagaaagtcgagctacaagggttagatttcctctgggagctgtgtcttaac
acgccagatgagagcattgcggatgccgccattcagcttttactcaatgtgtcttacaac
aatttgacctcacggctgaaaaaggatcctgtaaacctccacaagaagtttattaacgag
tgtaagacacggctagagatgtctgtaatcggtgtgagtggtacggccatctcacaggct
atattcagcgccacaagaaccctcaccgctcccactgtacctgagatcgccaccattgca
ataccatccaagtccattaagctgttgaacatcgagcgcttgctgtggattgcggagact
tatgttttaaatgtcgaagaaactcacaccagcccacgcaccattctcccacatggggcc
tcgttccaggggtaccagatcaacctgttcatcacatgtgaggcacccaagcaggagttc
atgcttgtgtgtcacagtaatgaaagtcttggtaatgttcggacaaagattgcgtctcgc
ttgcgtcactcctctgacaacatacagatggtagcgcaggagaaatcatactcaactgtg
ctgggagcaaacaaggaccagaagctcctacatcagctggattttgaagacagccagact
atacaggtccggatggtcactccaaccagcaccgctaccgtcaagcaggaggtgcaagat
caacctttaaacgaacagcagacatcattggccccaatgtccaagcagacgtttgacctt
gagcaggagaagatgttgccgggggtgatcatggctgccgggggacaggtgttcgatatg
ctctaccaactctcagaactcgatgaaaccaaaataaccacaagggtacggaaactgttg
atgttgatacccactgatccagcagtcatagaggtcttggactccatatcaaccagatta
ccaacactgggttcatcagatgacctgagcccacggtcaagccccaggaagcccgcagtg
tcaagcccgagaaatagtcctcaggaaacccttaaagctctgtttgattgctctagtccg
gacatgtcagcatttagggtgctgtataacctagaggtgctcagctgtaaactaatgccc
acagtcttagatatgggatctaaggccagctcccaggcatattttgaggacttcctgact
gccgggggtctttctacggtggtgaatgttttacaacccgagtcacttagtcaggacatc
cactatggaaccagacagggatgttactctgtgtgtctccaactggccagatacctgctt
tgtggtcagactgtaacaggcgagctagctttcaccccagccagggaggacctgcgccca
tcaagtgtggggtcagcagggggtggggccatggttgtcccggcaaccccacccccgggg
acacccactatcctgctacactcccttgagaccaggaccgctggcagtcatgctgtacag
acaatgggagtacatgacttcacagagacggtgtcctgcttcatgagggtagcgtgggca
gcagctgcaggaaagctccacctccttagttcaccacagccaatcagggagaacgcaaca
gcatatagctgtggtcgacgcagtaggcagagtagtacaggttctcagggcagtacaggc
agcgagagtgactgtagctccttacatgggggagtgtgtgtaaaacaacgcttcatctca
gccaaggactgtaacattgctaaggaggcattagaaatacttgtcacatgtttacaactc
cggagtgagctcattgccgcattctactctctgccatgtgtgagcgacttcatcattgat
atcctagtcggctgttcccagacggacattcgcagtgcagccatggatcagtttctcctg
ctttcccagacagagctgctgagcccagagttggggcggggaactcagactccacaccag
tttttgttacaagttatcctgaaggcttatcttcccttttgggtgtcatcgtctgccaca
agaggggctagtcagaggttgctcagtcagtgcacacagtattttgagttacgttgtaaa
ctactggaaaacctatgcagttcagaccaggcattataccaggttgaagtccctgatatg
ttggaagacgaggtggcttggcttggcaattttgtcccctctgaacacccagaactgaag
gagaccgacaaccttctactggcaggccaccttaaactgatacgcacactgtttacatgt
gacgatattagtaaggaggattatggaaagtcactagtccatgacctgttgcgagacttc
ctgttcccagcttccaagtgcatgatggatagcatgaatggtgcgacaacagatctgctg
ctgtctgagtttaacccaaggtgcagtaacacagattcccgtgtggcagcctatgagttg
ataacagagctggcccgcggttcgctgtccaacctgcaggacgtttgtcgtcagctcact
gagatgcaccatcagccaaatgtggactgtgccaatgagtgggagtacttacctcctgta
gatgggcgtgccgactgtggctatgtcgggttacgtaatggtggggcgacatgctacatg
aactcagtcatccagcagctgtacatggtgccagggataccagaggcagtgctcagtggg
gaggaggaggacactgtcaatgaggaaggagtttactaccagattcagcaggtatttggt
cacctaatggacagtcgactgcagtaccatgagcctgaaaggttctggaaggtgttcaag
ttgtggggcgaccccgtcaatatccgtgaacagcaggacgccttcgatttcttccaggcc
ctcattgatcagatcgatgaacagctcaagaaatcaaagaaggaagaagtctttaagaag
aaatttcagggaattttcactgaccaaaaaatatgcaaggactgtccacacaggtatgag
cgcgaggagatgttcacagcgcttaacctgactgtaaagaacgccactctgcaagattcc
ctcgaccagtttgtgaagggggaactcctcgagggcgacaacgcttactactgtgagaag
tgtggagagaagcgtaacacaatcaaacggatgtacatcaagaacctgccacccaccctg
tgtattcacctgaagagatttggttacgactgggaggccaacagggcacttaagtttgac
gactacttcaagttcccctgggtgttagacatggaaccatacacggcggaggggatggcc
cgacgggatgctgcggaggaggacaaggacggggacgagcccctgaccccctcaccacgt
ccccatgcagacgagggtcccgccatggaggtttccttcagtcctgagcccagacagatc
aactatgagctagtcggcattgtcgtacacagtggccaggctaatgctggccattactat
tctttcatcaaggaaaggagaggcacagtgttgaacaacaataacaaggggaagtggttc
aagtttaatgacacggtggtagaagagtttgacatgacagatgctgccattgaagctgag
tgttttgggggaacctacaaggccaaggtctacgagcagtctaattcctaccctgaagac
agacagcgctactggaatggttatatgctctactatgaaagaatggatgagaataagtct
tccctctcggccaaaaagagcaaaattgtcactagaaaactctggcctgatggcatgttg
agaagtaaccgtagttcggacagttttgtggagctcactgagctcgtacacaagggggag
aggcgaggaatattcatggacaagatgccgccaagtatacagagactcatacacagtgaa
aatctcacattcatcaagaacagggatgtctataaccaggaatacttcagatttgtgaag
aaccttgtggctagaaatactatgagctgtaagcaccctgactacagtgacatgtgtgtg
gtgtccctacagctagccgtcaagttcctcttcaacctctacttcaggacgaaaaagaag
tctttggaggacttggaggagtgggtggatgttttggatgagctggtacaccgatgtaag
cctgcctgtaggtggctgctggattatctcgccagtgaggagggctccacatatatcagg
cccttcctgctggaatgtcccagtaaagatgtgaggttttcatttgccaaaattttggag
aaggccatgtgttgttacttgtctgaacatggaggggtgcctaccgaaaagtgtgtagat
gacattgtggaacaactactgtctatgttgaacaaagatgtggttgaccagtgtaaacac
agtgtacagtacttcctagtcctgcgatcttatgtccaactgggcactaaggcagtgagt
cacatgttcatgaggaatgggttcaagcgtctggctgtgttcctgctcggtcaaccctcg
tctaacggggagcatgagtcaacgagctcgaggcgatggagctcagtacaatcccgagag
tttgctcaccttcaatcgacactcgccacactcattctcaattgtaatgttacccacaag
agaaccatagatataggggatcacaagccttacaaaccagtgatggcatcaccaaaaacc
ctgctgaagatgtcggcagagatggagaaatatgtgttcgggccggagtcaactaggtac
ctcaaagagattgtacaagccgttcgggaggtgaattgctccctggatgcggtctgtgat
atgctgtactactgtagcttctgtaacgaggcgtttagcaccactctgctgaaacaactc
atgatgcagtacatgactgccccttctaatgaactcaaaccagtattcagtgttctcact
gatctgttgtgtttagaagaccccctgcagctgaagagggtacagttggtgatagacgga
catgtggatgatcatgggcagcagtttgagggactccttgcggttatccgtctaaaccat
gttcaggacagcagacggtcatactggtgtatcaagttcctcgttaacctcgtgaacagg
tgctccgcagtgaagaactatctccaacagaccatgtccaaatggcaatgggcagttaac
tggcttaagaaaaagatgacagaacacaactactggagtgcaacaacaagtagcgtggtg
tccaatgaagactcgaacaggaagtccttccagaggactgtcagtgctcaggatacgctt
gatgaggctaccgccctgttgtccgagctggaaaacttcccggagatggataccaacggc
aacacagccacatctgactctgatactatggcaactgaagacacaccccctagcaaccag
gttgacaagccaaatacgacagaagagaaagaagagaaaaaggagggagaaaactcttga
DBGET
integrated database retrieval system
