KEGG   Mya arenaria (softshell): 128213622
Entry
128213622         CDS       T09995                                 
Name
(RefSeq) HBS1-like protein isoform X1
  KO
K14416  elongation factor 1 alpha-like protein
Organism
maea  Mya arenaria (softshell)
Pathway
maea03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:maea00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    128213622
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:maea03019]
    128213622
Messenger RNA biogenesis [BR:maea03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     128213622
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 HBS1_N GTP_EFTU_D2 MMR_HSR1 AAA_22 EF-G_D2 DUF7727
Other DBs
NCBI-GeneID: 128213622
NCBI-ProteinID: XP_052775544
LinkDB
Position
13:16246131..16263607
AA seq 762 aa
MSRHRNVRSMNYDEEYYDEDESYGHSVEDNYCVSPGTAAQFTFNREKDVALSHYMDEQGG
IPEEDEPEEGEETLHGSHDYTRPTLSSIDEARLNSCLEDVRNVLGESVPDSMMVSTIIRH
NFSIESSLNELLNKQVEEAPKPQREPRQNRRNRSQGSSDNSAPAKPQLELDFPTEPPTVI
LKEPRKPLTSVPQPKIIEPYLSQPTVVKSMSPQRTPKGKNRTAELAPLAAKAKNDNKVAL
TKDAKAVSSESKDKRTDTLDVEKSASSEKIENKDQLATPKKERFIPPLPRSSSKSKYEKY
DLKEEYKKRQGGKDMLNMVVIGHVDAGKSTLMGHVLYQLGSVNQRVMHKYEQESKKLGKS
SFAYAWVLDETEEERARGVTMDIAQTKFETPHKIITLLDAPGHKDFIPNMITGTAQADVA
ILVVNATKGEFETGFESGGQTREHALLARSLGVHQLIVAVNKMDTVGWDPARYDDIVRKL
GLFLKQAGFREGDTNFVPVSGLGGENLAKPIKEPKLAAWYKGLNLLEQIDKFKPVPRAVD
RPVRIMVSDVFKGQQGSGLTAAGKVVSGSVQIGDRLAVMPAAEYCIVKSITNNEEAVNFA
FSGDHVIVGVAGIDITNIVVGSVFCDVQTPVVCASRILARIVLFNLEIPMTRGFTVIFHY
QTVTEPAIVKKLVSHLNKSTGEVIKNKPKCLMKNSSAVVEIEFEFPLCVELYKDNKEMGR
FMLRSGGHTIAAGLIEEVLKTKAGEGVKKGGEGAESQGAMGN
NT seq 2289 nt   +upstreamnt  +downstreamnt
atgtcaagacatagaaatgttcggtctatgaactacgatgaggaatattatgatgaagat
gaaagttatggccattctgtagaggacaactattgtgtgtctccaggaacagctgcccag
ttcacattcaacagagagaaagatgtggccctgtcacactacatggatgagcagggcggg
attccggaagaggatgagccggaggaaggggaggaaactctccatggctcacatgactac
acacgcccaacactctccagtattgatgaagcgagactgaattcgtgcctggaggatgtt
cggaatgttcttggggagtctgtgcccgattcaatgatggtcagcacgatcattcgccat
aacttcagcattgaatcatctctcaatgaacttctgaataaacaagttgaagaagcccca
aagccacaacgggagccgagacaaaaccggagaaacagatcacaaggatcatcagacaac
tctgctccagcaaaaccccagttggagcttgacttcccaactgagccccctactgtgata
cttaaagaacccagaaaacccctcacttctgtaccccaacctaaaattatagaaccttac
ctctcacagcccactgtggtgaaatcaatgtctccacaacggacaccaaaagggaaaaat
aggactgcagagttagctccacttgcagcgaaagcaaaaaatgataataaagttgcattg
actaaagatgctaaagcagtatcaagtgaaagtaaagataagagaacggacacattggat
gttgaaaagagtgctagttctgaaaaaattgagaataaggatcagcttgccacaccgaag
aaggagagatttataccacctctgcctaggagttcctcaaaaagcaagtatgagaagtac
gatctgaaggaggagtacaagaaacgccagggcggcaaggacatgcttaacatggtcgtt
ataggtcatgtggatgcaggcaagagtacattaatgggacatgtgctgtaccagttgggc
tcagtaaaccagcgtgtaatgcacaagtatgaacaggagtctaagaagctgggcaagtcc
tccttcgcgtacgcctgggttttggacgagacagaggaggaaagggccagaggggtaaca
atggatattgctcagacgaagttcgaaactcctcacaagatcatcaccttgctggatgcc
cctggacacaaggactttatacccaatatgatcacaggcacagctcaagcagatgtggcc
atacttgttgtgaatgccaccaagggagagtttgaaacgggctttgagtctggagggcag
acaagggaacatgcacttcttgccaggtcactaggtgtccatcagctgatagtagcagtc
aacaagatggacactgtgggctgggacccggccagatacgatgacattgtccggaaactg
ggtctgttcctcaagcaggctggctttagggagggagacactaactttgtaccagtcagc
gggcttggtggagaaaatcttgcaaaaccaatcaaagagcccaagctagcagcatggtac
aagggtttgaacctgctggagcagatagacaagttcaagccagtgccacgtgcagttgat
aggccggtacggatcatggtgtcggatgtgttcaagggccaacaggggtcagggcttact
gcggcggggaaagtcgtctctggcagtgtacagataggggataggctggcagtgatgcct
gctgccgagtactgtattgtaaaaagtataactaacaatgaggaggcagttaattttgcc
ttttctggtgaccatgtgattgtgggtgtggcggggattgacattaccaacatcgttgta
ggaagtgtgttttgcgatgtccagactcctgtagtgtgtgccagccgtatccttgcacga
atagtgctcttcaacctagaaattcccatgacccggggatttactgtgatattccattac
cagactgtgacagagccggcaattgtgaaaaaacttgtctcacacctcaacaagagtact
ggagaggtcatcaaaaataaacccaagtgtttgatgaaaaactctagcgctgttgtggaa
atagagtttgagttcccgctgtgtgtggagctgtacaaggacaacaaggagatggggcgg
ttcatgttgaggtccgggggccacaccatcgccgcagggctcattgaagaggtattgaaa
acaaaggctggtgagggagtgaagaaaggtggtgaaggggcagagtctcaaggagcgatg
ggaaactga

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