Mya arenaria (softshell): 128213622
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Entry
128213622 CDS
T09995
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
maea
Mya arenaria (softshell)
Pathway
maea03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128213622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128213622
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
128213622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
EF-G_D2
DUF7727
Motif
Other DBs
NCBI-GeneID:
128213622
NCBI-ProteinID:
XP_052775544
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Position
13:16246131..16263607
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AA seq
762 aa
AA seq
DB search
MSRHRNVRSMNYDEEYYDEDESYGHSVEDNYCVSPGTAAQFTFNREKDVALSHYMDEQGG
IPEEDEPEEGEETLHGSHDYTRPTLSSIDEARLNSCLEDVRNVLGESVPDSMMVSTIIRH
NFSIESSLNELLNKQVEEAPKPQREPRQNRRNRSQGSSDNSAPAKPQLELDFPTEPPTVI
LKEPRKPLTSVPQPKIIEPYLSQPTVVKSMSPQRTPKGKNRTAELAPLAAKAKNDNKVAL
TKDAKAVSSESKDKRTDTLDVEKSASSEKIENKDQLATPKKERFIPPLPRSSSKSKYEKY
DLKEEYKKRQGGKDMLNMVVIGHVDAGKSTLMGHVLYQLGSVNQRVMHKYEQESKKLGKS
SFAYAWVLDETEEERARGVTMDIAQTKFETPHKIITLLDAPGHKDFIPNMITGTAQADVA
ILVVNATKGEFETGFESGGQTREHALLARSLGVHQLIVAVNKMDTVGWDPARYDDIVRKL
GLFLKQAGFREGDTNFVPVSGLGGENLAKPIKEPKLAAWYKGLNLLEQIDKFKPVPRAVD
RPVRIMVSDVFKGQQGSGLTAAGKVVSGSVQIGDRLAVMPAAEYCIVKSITNNEEAVNFA
FSGDHVIVGVAGIDITNIVVGSVFCDVQTPVVCASRILARIVLFNLEIPMTRGFTVIFHY
QTVTEPAIVKKLVSHLNKSTGEVIKNKPKCLMKNSSAVVEIEFEFPLCVELYKDNKEMGR
FMLRSGGHTIAAGLIEEVLKTKAGEGVKKGGEGAESQGAMGN
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagacatagaaatgttcggtctatgaactacgatgaggaatattatgatgaagat
gaaagttatggccattctgtagaggacaactattgtgtgtctccaggaacagctgcccag
ttcacattcaacagagagaaagatgtggccctgtcacactacatggatgagcagggcggg
attccggaagaggatgagccggaggaaggggaggaaactctccatggctcacatgactac
acacgcccaacactctccagtattgatgaagcgagactgaattcgtgcctggaggatgtt
cggaatgttcttggggagtctgtgcccgattcaatgatggtcagcacgatcattcgccat
aacttcagcattgaatcatctctcaatgaacttctgaataaacaagttgaagaagcccca
aagccacaacgggagccgagacaaaaccggagaaacagatcacaaggatcatcagacaac
tctgctccagcaaaaccccagttggagcttgacttcccaactgagccccctactgtgata
cttaaagaacccagaaaacccctcacttctgtaccccaacctaaaattatagaaccttac
ctctcacagcccactgtggtgaaatcaatgtctccacaacggacaccaaaagggaaaaat
aggactgcagagttagctccacttgcagcgaaagcaaaaaatgataataaagttgcattg
actaaagatgctaaagcagtatcaagtgaaagtaaagataagagaacggacacattggat
gttgaaaagagtgctagttctgaaaaaattgagaataaggatcagcttgccacaccgaag
aaggagagatttataccacctctgcctaggagttcctcaaaaagcaagtatgagaagtac
gatctgaaggaggagtacaagaaacgccagggcggcaaggacatgcttaacatggtcgtt
ataggtcatgtggatgcaggcaagagtacattaatgggacatgtgctgtaccagttgggc
tcagtaaaccagcgtgtaatgcacaagtatgaacaggagtctaagaagctgggcaagtcc
tccttcgcgtacgcctgggttttggacgagacagaggaggaaagggccagaggggtaaca
atggatattgctcagacgaagttcgaaactcctcacaagatcatcaccttgctggatgcc
cctggacacaaggactttatacccaatatgatcacaggcacagctcaagcagatgtggcc
atacttgttgtgaatgccaccaagggagagtttgaaacgggctttgagtctggagggcag
acaagggaacatgcacttcttgccaggtcactaggtgtccatcagctgatagtagcagtc
aacaagatggacactgtgggctgggacccggccagatacgatgacattgtccggaaactg
ggtctgttcctcaagcaggctggctttagggagggagacactaactttgtaccagtcagc
gggcttggtggagaaaatcttgcaaaaccaatcaaagagcccaagctagcagcatggtac
aagggtttgaacctgctggagcagatagacaagttcaagccagtgccacgtgcagttgat
aggccggtacggatcatggtgtcggatgtgttcaagggccaacaggggtcagggcttact
gcggcggggaaagtcgtctctggcagtgtacagataggggataggctggcagtgatgcct
gctgccgagtactgtattgtaaaaagtataactaacaatgaggaggcagttaattttgcc
ttttctggtgaccatgtgattgtgggtgtggcggggattgacattaccaacatcgttgta
ggaagtgtgttttgcgatgtccagactcctgtagtgtgtgccagccgtatccttgcacga
atagtgctcttcaacctagaaattcccatgacccggggatttactgtgatattccattac
cagactgtgacagagccggcaattgtgaaaaaacttgtctcacacctcaacaagagtact
ggagaggtcatcaaaaataaacccaagtgtttgatgaaaaactctagcgctgttgtggaa
atagagtttgagttcccgctgtgtgtggagctgtacaaggacaacaaggagatggggcgg
ttcatgttgaggtccgggggccacaccatcgccgcagggctcattgaagaggtattgaaa
acaaaggctggtgagggagtgaagaaaggtggtgaaggggcagagtctcaaggagcgatg
ggaaactga
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