Mya arenaria (softshell): 128213740
Help
Entry
128213740 CDS
T09995
Name
(RefSeq) general transcription factor IIF subunit 1-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
maea
Mya arenaria (softshell)
Pathway
maea03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128213740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maea03021
]
128213740
Transcription machinery [BR:
maea03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
128213740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
DUF3874
RecX_HTH1
Motif
Other DBs
NCBI-GeneID:
128213740
NCBI-ProteinID:
XP_052775732
LinkDB
All DBs
Position
13:24711724..24721536
Genome browser
AA seq
528 aa
AA seq
DB search
MATNLPATTATTGKPGSSTGSQSTTTEYVVRAPNDKSKKYSMIKFGTGTDIDFLKLTNTT
VRMERENNLKEYKTANNLETQPKFGAGSEYGREQKFEARRKKFGIHLKKYNPDDQPWVMK
VGKGKDCKRYKGVREGTITENTSYYIFTQCADGAFEAHPVEEWYNFQPVVQYKYLNSEEA
EEEFSRRDKTMNLFSIMVRKRIKNEDDVEDNKEEKKVKSKGKKNLILTDMEDWAISSEEE
EEEGEEGEKKPKKEKKKEEKKRRKNAKMNDNDEAVEESDEGDFDDRELDYISDSGSESEL
DEKAKDEKYDDQGVEQEQGLKKLIDSEEESSEEEEKEEEEENEEDEVKETKKEKKKKKEK
KESNKEGDESESSSSSSESEESDIEKNEEKFSSVLFMQKKKGGSRSNTPTFDKSGEGAKT
DGGLKRKLDSEEAVIEKKVRTESPTPSITQSSSTTSVTSSGEITEEAIRRYLSRKPMTAK
ELVQKFKSKKPQMSKEQMTQRIGQLLKKINPDRKYVNQILYLSLKKPE
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaatttgccggccacaacggccacaacaggaaagcctggtagctcgacaggt
agtcagtcaaccacaactgagtatgttgtgagggctccaaatgacaagtccaagaaatac
agcatgatcaagtttggcactggaacagatatagacttcctcaagttaacaaatacaaca
gttagaatggaaagagaaaacaacttaaaagaatacaaaacagccaataacttggaaacg
cagccaaagttcggagctggaagcgaatatggaagggaacaaaagtttgaagctagaaga
aagaagtttggtatacatctcaagaaatacaatccggatgatcaaccatgggtaatgaaa
gtggggaaaggaaaagactgtaaaaggtataagggtgtacgagagggaaccataacagag
aacacatcttactacattttcactcagtgtgctgatggtgcttttgaggcacaccctgtt
gaagagtggtataatttccagccggttgtgcaatacaaatatctaaactctgaggaagca
gaagaagagtttagcagacgagacaagacaatgaacttgttctctatcatggttcgtaag
aggataaagaatgaagatgacgtagaggataataaggaggagaagaaagtgaaatctaag
ggcaaaaagaatctgatcctgacagacatggaagattgggcgattagttcagaagaagag
gaggaggagggggaggagggagagaaaaagcccaagaaggaaaagaagaaggaagagaag
aagcgtcgtaagaatgccaagatgaacgataatgatgaggcagtggaggaaagtgatgag
ggcgactttgatgaccgtgagctggattatatatctgattctggcagtgaatctgagctg
gatgaaaaggctaaagatgaaaagtatgatgatcagggagtggagcaagaacagggtctg
aagaagctgatagactctgaggaggagtctagtgaagaggaagagaaagaggaagaagaa
gagaatgaggaggatgaggtaaaggagaccaagaaagagaaaaagaagaagaaagaaaag
aaggaaagtaacaaagaaggtgatgaaagcgaaagtagcagttcatcttcggaaagtgag
gagtcagacatcgagaaaaatgaggagaaattctcatctgtactctttatgcagaagaaa
aagggaggctcgagatctaacactccaacatttgacaagtctggagaaggtgccaagact
gatggtgggcttaagcgtaagcttgacagtgaagaagctgtcattgagaaaaaagtgagg
acagagtcgcctacccctagtatcactcagtcgtcctctacaacatcagttactagcagt
ggtgagatcacagaggaggcaatcaggcgatacctgtcgagaaaaccgatgactgcaaag
gagctggtacagaagtttaaatccaaaaaacctcagatgtccaaggagcagatgactcag
cggatcggacagttgttgaaaaagatcaacccggataggaaatatgtgaatcaaatactg
tatttgtcactgaagaagccagaatga
DBGET
integrated database retrieval system
