Mya arenaria (softshell): 128213780
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Entry
128213780 CDS
T09995
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
maea
Mya arenaria (softshell)
Pathway
maea03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128213780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128213780
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128213780
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR
TPR_MLP1_2
Nucleoprot-TPR
ODF2_C
CCDC18_1st
FKBP15
ATG16
ZapB
Motif
Other DBs
NCBI-GeneID:
128213780
NCBI-ProteinID:
XP_052775788
LinkDB
All DBs
Position
13:complement(29927432..29972659)
Genome browser
AA seq
2444 aa
AA seq
DB search
MAGAVELNAVLTSEELSTLSEEIKNKLNTGFAAVNNRLEELLSNYEKLKVNSEQQYVDVE
RQLTSTNARLETELATNKRLQDEHSELEQKYNEASAKLKEFQESQDGNLSTQLRLTRVNE
QLECEKREMAVVLEKRSREIDTLNEELREMSTKMSEMNLAKCEALAKLDELKSGEVHREF
QVQRLTQERDNLQQQVEWLNNDLTEKTRDLMTTRREKSTSLLDVQAQLEEKNEECSLLNT
TLDTLKKQNADQAQKIDNFIQRIKDIQDSNSQGEEQYKQEISARIRLAELYKTSSEEAEA
KSQELLGAVTELQVLLKDAAQAHTDMENEKNEEIEKVQAELREREKKIINLEQELVNAND
LLSAMKAKGASSEKVEAMFPTAAVTSKVLKSGMSLTQIYNEYVQATDSLQLEKDENKRLN
LYLDQILQEIEAKAPMLKKQREDYEIALRSIDQMTRQLDGAMLEHQTLRSEADNSHRKAS
HLLKENQKHEKTIRDLAQQVRYLVKEMEEVRGGRVVRDELSSNEISSSASLISDRLVTFG
NIEELQEQNQKLLAVIRDLSGKHEEEENSAIDAKTRELKRQLEEAHEELGHMKDTRIHQT
EMIESIVRQRDMYKTLLHQANSEEVAITSFQQSGAGRTPDKGSLKSPGLDRGAQKQAEES
AKALKQLQEDFTTYKKDKHENEKIINAQLDSQRKEVADMRVQNARLSSQLEFAAERNKVS
LANMEGYKKEIAVLRDKVQKYTASVAKHEQTINSQRQELMSVQEKLSSAQSRADSLQSER
DIIKSSEKRLLEELECLRRERHSQTMLMANLQTIQNNLQRSEHETRHRLSKQIEALERER
NMLQRKLEMEEKQGLTVRKHFQDQVKEVRGEIDQELRAHQRTKDQQVALNTEITELKQQL
SVTTTKLAEAETRLADASDGSVGGDSARDNRAQLEKVQAEVASLTDQLHKARQHTDQYKT
IADGLQTTISKQNKVSEELKTEIEEKLRIADQEREYLRGRVDDLDTERRHLEEENIRVSE
ESHELNAELRKKLEELQNELQEANERRETAIAIEMSAKQECDHQTGIAANAEDKYRHELM
LHAADVEALSALKKEMEGFNSQLSEKEEKCHIAEQKLADLLVSSAHREKLLTEEKDKMAA
RLADLMQETKALHQQMTKLSNQVISIQDRAVASPRGKPGSSTTPEEDASKSTEQLLEVIR
YIRKEKSIVDGKMDVIETECSRLRQRCEALERQLDSANKQLGEEREQAQAGMQTAAQHAE
LLHRVESYNLLHDSNKMLREERDRIQTQLTQTEAKLAKLEETIRPLQSDMRDMQAQRDAL
AVEKKSLTAEMDRWKNRTNQLIEQSHKTDPEEHKKLLQEKEEFRTKNTALTEELQRVRTD
LTKTNLEHAKLQRQLGQLQGEYAKQSEEVQKLTASVEEKDSEMKDKMKTLNQLRQLGRKY
KTQAEVTQKEMEELKAEREQRKAAAQNQQVSTERIAALEQQLQEAKLKCSGLESCLSQAQ
AKLTEGETSIAKAADDKTKLETHIKETVEKKQRMEEQVIGLKIEVGQMKAQISNLKEENS
ALKDQISKQTSEISQLKEQNSSLTEKQSAQPDTQQQDQVNEQISAELQGKTKEIQTLNET
LTTVNKEKDELKTKGERCFAALKSARSKLESMKEINSQLTSERADIITKYGDGGEMKQRA
LEAEQKLSTLESQIAALTQEKENLQKENAELATKVAQLQSQVSGGPSAQGSRSTPSVAQD
RTSSPAEPPKTANIRPISSSSPASTKPQTVPVPPQSGASKVTASIRPMTIPPVTTTCTPT
ATVMPTTVSQPDNIYLEEEVPGLVQQQLFSQQAAVGTARPTQQVHRLLPTPETTTVERVQ
EHLQGHSDRASYVEPHQSTSWEPAHPQVRDTPGGSSQHQNKRTRDESSPGEDLCVKRSKV
TVAEVEVAPEVSEEAQPQQDGIQVVEVAPTPAVDQAAQQAIEEGEGDEDVENEGDMEETE
EGEEEQANEEETQEEESEDDDAIIVVGSDDDDETQQEEEDDEDDDNDDEEQEEQQEEDQG
MEEEEEYEERQEDEEDDGDVDIYAGVGQEEENGDDGGQREEEEDDDVVIIGDDDDDGALS
SQEIGSQPASQSTSMAELVPPIAPPERQFSTGGTGNLLAPFMLGSAQTGFEDMDDCTVPS
TPTLHVPRHGDGFAEAIHSPQVAQRFVFGSGSGEQQRLTLSGLAQLENQPGLGMGMDDTR
MDLSQLDEGSGRSVPSTPLPTSAPVTIITEAEPVTGQSDMSVPGSSQPEAGNEEGAEQEG
EQFEEELDEEHEFEGEQGDEDSQEDYPVMHSVQNIDDLNTDDEEASQETGERAEGGFPDM
SSSKEDSSTSTDKPSDPRPRIQRIVWQDPSPTTTATGPLPSASQPIQSVPIGQFRRGGPP
RGRVRVPTGSLRGAIQGGFQQRGGPRRPMRSRGGGPFQRRPNMY
NT seq
7335 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggctgtagaactcaacgctgttctgacttccgaagaactttctacgttatct
gaagaaataaaaaataaattaaataccgggtttgcagctgtaaataacagattagaggaa
ttgctatcaaattatgaaaaactcaaagtcaattcagagcaacaatatgttgatgtagag
agacagttgaccagcacaaatgccagacttgagacagagctggccacaaacaagcgactg
caagatgaacattctgaacttgaacaaaagtacaatgaagcgagcgcaaagcttaaagag
tttcaggagtcccaggatggcaacctctcaactcagttgcgactgactcgagtcaatgaa
cagctggaatgtgagaagcgcgagatggccgtggttcttgagaaacgcagcagggaaatt
gatacactcaatgaggagttacgagagatgtctacgaagatgtctgagatgaacctggcc
aagtgtgaggcccttgccaagctcgatgaactaaagagtggcgaggttcatagagagttc
caagtccagcgtctgacacaggaaagggacaatcttcaacaacaggtcgagtggctcaac
aatgatttaacagaaaaaactcgagatcttatgaccacaagaagagaaaagtcaacctct
ctgctagatgtacaagctcagttggaggagaagaacgaggaatgtagcttgcttaacaca
acattggacactctcaagaaacagaatgcggaccaggcacagaagattgacaacttcatc
caaagaatcaaagatatccaggacagtaacagtcaaggggaggagcaatacaaacaggag
attagcgcccgcatacggcttgcagaattgtacaagacttcatcagaagaggctgaggcc
aagtctcaagaactacttggagcagttactgagctacaagtgctcctaaaagatgccgct
caagctcatacagacatggagaatgagaagaatgaggaaattgaaaaagtccaggcagag
ctgagagaaagagaaaagaagatcattaatcttgaacaggaactagtcaacgccaatgat
ctcctctctgccatgaaggctaaaggtgcgagttcagaaaaggttgaggccatgttccca
acagcagcagtcaccagtaaagtcctcaaatctggcatgtcccttacccagatatacaac
gagtacgttcaggccacagacagcctacagctggagaaggacgagaataagagattgaat
ctatacttggaccagattcttcaggagatagaagccaaggctccaatgttgaagaagcag
cgtgaggactacgagattgccctgcgcagcattgaccagatgaccagacagcttgatggc
gcaatgctggagcaccagaccctacgttcagaggcagacaacagtcataggaaggccagt
cacctcctcaaggaaaaccagaaacatgagaagaccatccgtgacctagctcaacaggtg
cggtacctggtcaaggagatggaagaggtccgtggggggcgtgtggtgcgtgatgagcta
tcatctaacgaaatcagcagctcggcatctctcatctcagacagactggttacattcggg
aatatagaagagctacaggaacagaaccagaaactgcttgcagtgataagagacttgtcg
ggcaaacatgaggaagaggaaaactccgccattgatgccaagactcgtgagttgaagcga
cagttggaggaggcacatgaggagctgggccacatgaaggacacacgtatacaccagaca
gaaatgattgaaagtattgtgaggcagagagatatgtacaagacattactgcatcaagct
aattcagaagaggtggcaatcacatccttccaacagagtggggcagggcgcaccccagat
aaggggtccttaaagagccccgggcttgatcggggagctcaaaaacaagcagaggagtca
gctaaggccctaaagcagctacaggaggactttaccacatacaagaaggacaaacatgaa
aacgaaaagattatcaatgcacagttggattcacagaggaaggaggtggctgacatgcgg
gtacagaatgccagattatcatcacagcttgagtttgcggccgaacgcaataaggtatcg
ctagcgaatatggaaggttacaagaaggagattgctgtgctcagagacaaagtgcagaag
tacacagcatctgtggctaaacatgaacaaactattaattctcagagacaggagctcatg
tcagtacaggaaaaattatcctcggcccagtcccgggcagatagtctgcagtcagagcgt
gacatcattaaatcatcggagaaacgactcctggaagagctagaatgtctccgacgagaa
cgccactcacagaccatgcttatggctaacttacaaacaatacagaacaacctgcagaga
agtgaacatgagactcgacatcgcctgtccaaacagatagaggccctggagagggaaaga
aatatgctgcagagaaagctggaaatggaggaaaagcagggcctcactgtcagaaaacac
ttccaggaccaggtgaaagaggtgcgtggagagatagaccaagaactaagggcccatcag
aggaccaaagaccagcaagtggcactcaacacagagatcactgaactgaaacaacagttg
agcgttacaaccaccaaattggcagaggctgaaacgcgccttgctgatgcatcagatggc
tcagtgggaggggactcggcacgagataaccgtgcacaattggagaaggttcaagctgaa
gttgcaagcctcactgaccagcttcacaaggccagacaacatactgatcagtacaagacc
attgcagatgggttacagactaccatttctaaacagaataaggtcagtgaagaactgaag
acagaaattgaagagaagttgcggatagctgatcaagagcgtgagtatttgcgtggtcgg
gtagatgacctagatactgagagacgacacttggaggaagaaaatatccgggtgtccgag
gagagccatgagctgaatgcagaactgcgaaagaaacttgaagaactccagaatgagctg
caagaagccaatgagcggcgcgagactgccatagccattgagatgtcagcgaagcaggaa
tgtgaccaccagacaggtattgccgccaatgccgaggacaagtaccgacatgaactgatg
ctacatgcagccgatgtggaggctctgtcggcgctcaagaaagagatggaagggtttaat
tcgcagctcagtgaaaaagaggaaaaatgtcatatagccgagcagaaacttgcagatctt
ctggtatcctcagcacatcgtgagaagttgttgacagaagagaaagacaagatggctgcc
cgccttgcagatcttatgcaggaaaccaaggccctccaccagcagatgaccaagctgagt
aaccaggtgatcagcatccaggatagggcagtggccagtccacggggtaaacctggcagc
tccacaacacccgaggaagatgcttccaagtccactgagcagttgttagaggtgatcagg
tacatccggaaggagaagtctatagttgacgggaaaatggatgtaattgagacagagtgt
tccaggctccgtcaacgctgtgaggccctggagagacagttggactccgctaataaacag
ctgggagaggagcgggagcaggcacaggctggtatgcagactgctgcccagcatgcggag
ctgttgcaccgtgtagagtcgtacaacctgctgcatgacagtaataaaatgcttcgtgaa
gaaagggaccgcattcagacccagctcacacagactgaggctaagctggccaagcttgag
gagaccatccgtcccctgcagtcagacatgcgtgacatgcaggcccagcgggatgccctg
gctgttgagaagaaatccctgaccgcagagatggaccgctggaagaacagaacaaaccag
ctgattgagcagtcacataagactgaccctgaggaacacaagaaactcctgcaagaaaag
gaagagtttagaacgaaaaacactgctcttactgaagagctgcagagagtaaggactgac
ctcacaaaaaccaacctagaacatgccaagcttcagaggcagctgggccagctccaggga
gaatatgccaaacagagtgaggaggtgcagaagctgacggcaagtgtggaggagaaggac
agtgagatgaaggacaagatgaagacactcaaccagttgcgtcagctgggtaggaagtat
aagacccaggctgaggtgacccagaaggagatggaagaattgaaggcagagagggagcag
aggaaggcggctgcccaaaaccagcaagtgagcacagaacggatagcagccctagaacag
caactgcaagaggccaaattaaaatgctcaggattagaatcctgtctgtctcaagcccag
gctaaactcactgagggtgaaaccagtatagctaaggccgctgatgataagaccaagtta
gagacacatattaaggaaacagttgaaaagaaacagagaatggaagaacaagtgatcggc
cttaagatagaggtcggccagatgaaggcacaaatatccaacctaaaagaggagaattct
gccctaaaggatcagattagcaagcagacgagcgagataagtcagctgaaggaacagaat
tcatctctaacagagaagcaatcagctcagccagacacgcagcagcaggatcaggtcaat
gaacagatctctgctgaactgcagggtaaaacaaaggaaattcagaccctcaacgagaca
cttactaccgtgaacaaggaaaaagatgaactgaaaacaaagggtgagcgttgttttgct
gcactaaagtcagccaggtccaaactggagtcaatgaaggagatcaacagtcagctgact
agtgagcgggccgacatcatcacaaaatatggagacggaggagagatgaagcagagagca
ttggaagctgaacaaaagttatcaactctggaaagtcagattgctgctttgacccaggaa
aaggaaaatctgcagaaagagaatgctgaacttgccactaaagtagctcagctgcagagc
caggtatcaggagggccatcagcccagggctcccgctccacacccagtgtggcccaggac
aggaccagctccccagcagagcccccaaagacagccaacattcggcccatatcatccagc
agccccgcaagtacaaagcctcagaccgtccctgtgcccccacagtccggggcttctaag
gtgactgccagtattcgcccaatgacaatccctcccgtcactacaacttgcacccctact
gctactgtgatgcccaccactgtctcgcagccggataatatctatttggaagaggaggtc
ccaggcctggtacagcagcagctgttctcccagcaggccgcagtggggacagccagaccc
acccagcaggtccacaggctattacccactcctgagactacgactgtagaacgcgtccaa
gagcacctccagggtcactctgaccgggcgagctatgtggagccccatcagtctacttcc
tgggagccagcacacccgcaagtcagggacacaccagggggttcttcccagcaccagaat
aaaagaacgcgagatgagagcagcccaggtgaagatctgtgtgtgaagagaagcaaggta
acagtggccgaggtcgaagttgccccagaagtatcggaagaggcccagccccaacaggac
ggtattcaagtggtagaggtggcccccacccctgcagtagaccaagcggcccaacaggcc
attgaggagggagagggagatgaggatgtcgagaatgaaggagatatggaagagactgaa
gaaggtgaggaggaacaggcaaatgaggaggagacacaggaggaagaatcagaagatgat
gatgccattattgtggttggatcagacgatgatgatgagacgcagcaagaggaagaggat
gatgaagatgatgacaatgacgatgaagaacaagaagagcaacaagaggaagatcagggt
atggaagaggaggaagagtatgaagagagacaggaggatgaggaggatgacggagatgta
gatatctatgcgggggtcggacaggaggaagagaatggggatgatgggggacagagagaa
gaggaagaagatgatgatgtggtcatcattggtgacgatgatgatgacggtgccctgagc
tcacaagagattggctcccagcccgcaagccagtcgacctctatggcagagctggttccc
cctattgcaccaccagagaggcagttctcaacaggagggacggggaacctgttggcacca
tttatgcttggctctgcccagactgggtttgaagacatggatgattgcacggtgcccagt
acccccacgttacatgtgccccgccacggggacgggtttgctgaggcgattcactcccca
caggtggcccagaggttcgtgtttggcagtgggagcggggagcagcagagactgacactg
tctggactcgctcagttggagaaccaaccaggccttggtatgggtatggatgatacacgg
atggacttatcacagctggatgaggggtcaggtagaagtgtcccatcaactccacttcct
acatcggccccagtgacaatcatcacggaggcggagccagtgactggccaatcagacatg
agcgttccaggcagcagccaaccagaggccggcaatgaagaaggggctgagcaagaaggg
gaacagtttgaagaagagcttgatgaagaacatgaatttgagggtgagcaaggagatgaa
gattcccaggaagactaccctgtgatgcattcagtgcagaacattgatgatcttaacact
gatgatgaggaggcaagccaagaaacaggtgagagagcggaaggtggtttccctgatatg
agcagcagtaaggaggactcatccacatcaactgataagccctcagatccaagaccaaga
attcaaaggattgtgtggcaggatccatcgccaactacaaccgctacaggccccttaccg
tctgccagtcagccgatccagtcagttcccattggtcagttccggcgtggaggtccacca
aggggcagggttagggtccccactggatccctacgtggggctatacaagggggtttccag
cagagagggggtcctcggagaccaatgaggagccgtggagggggcccgttccagagacgg
cccaacatgtattga
DBGET
integrated database retrieval system
