Mya arenaria (softshell): 128213937
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Entry
128213937 CDS
T09995
Name
(RefSeq) ubiquitin-protein ligase E3C-like isoform X1
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
maea
Mya arenaria (softshell)
Pathway
maea04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128213937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
maea04121
]
128213937
Enzymes [BR:
maea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
128213937
Ubiquitin system [BR:
maea04121
]
Ubiquitin ligases (E3)
HECT type E3
128213937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
DUF3413
Motif
Other DBs
NCBI-GeneID:
128213937
NCBI-ProteinID:
XP_052776010
LinkDB
All DBs
Position
13:19352155..19365759
Genome browser
AA seq
1075 aa
AA seq
DB search
MFSFEGDFRRKPVQSLRGASKKEERSSLLKRAQEEREKRENQRLKQENAVKIQKFYRGYR
VRKQQKEAMRVQFDRLQLMLQKGPFTVDNLQLLVSTICQFYSDNQDGERLVWLSQQLVKH
KDTYLKFLQADPRNGQQQVKNILLLCLRHLRAISSSGEPIAIPMRMLEVFTSSTSIADTN
YLKSVWRWLIENDYFECMRCLLERKVPASLEKSHTPPTPVAASIFELILTPIRFAEACKD
TLFSNQVLGSVCKSLLCPAYSEQISQFLIPAMAYGKYPFPFVDLITTLVVQCRESGIGEG
KNKGYGRTLDRRTIRVDLTPWLLGAFVTLGAKQIESLSQAKVSEYVEVLQYLLPSLPSAN
DPDDDGDSDSEEDMEVEDYASGAGGLAELREDCLSALDSPSHVTHIVGLVGRGDAQLLYA
VAVICHTLMAHHRYSIHRRRLLYSLAYNPQFIKNLWQCCVGQTMVTATRTETSLIMMLSR
GLTMSEREMGRIVPLLSTFCSMFSHSLHTLHDADFYGDDTGNASSMPFNLLELIQMVIAL
RDVCLGIIELAHPDAKPTINDDYRVALNRVGVPMRKSNAKEISKLTKQWGYLFKVTAGLV
RQVYTRDARRSFCPKDLWLSDRVKIHADGSSQLYRSQASVFTHRPFRTMQSLSQVNEDDG
GPPLSNKDVKNLVILTELPFVVSFHERVKILQKLINADRADYQGEMDHFMSANSVTVNIR
RNYIYEDAFDKLSPENEPNLKLKMRVQLVNAAGLDEAGIDGGGIFREFLNVLLKTGFDPN
RGFFSQTTDRLLYPNPQSKFLMEDFTKHYYFLGRMLGKALYENMLVELPFASFFLSKILS
RHSGDLDIHHLASLDPEMYRNLLFLKHYDGDVGELGLDFSVVDNQFGETKIEELKPGGKN
IPVTASNRIEYIHLMADYKLNKQIRHHCTAFRNGLSDLINLEWLRMFDQQELQVLISGAA
VPINIADLRQHTNYSGGYADDHPMIKMFWEIVENFTDEQKRQLLKFVTSCSRPPLLGFKD
LYPALCIHYGGNEPGRLPTASTCMNLLKLPEFKDFASLRDKLLYAIESGAGFELS
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgttcagttttgaaggtgattttcggaggaaacctgtccagtccttaagaggagcaagt
aaaaaggaagaaaggtcaagccttttgaagagggcacaagaagagagagaaaagagagaa
aatcaaagactaaaacaagaaaatgcagtcaagatccaaaagttttatcgtggctatcga
gtgaggaaacagcagaaagaagcaatgcgagtgcagtttgaccgcctgcagttgatgctg
cagaaaggcccgttcaccgtagataacctgcagttacttgtctccaccatctgccagttc
tactcggataaccaagatggtgaaaggctggtatggttaagccagcagctggtgaaacac
aaggatacttacctcaagtttctgcaggccgaccccaggaatggccaacaacaagtgaaa
aacatccttctcctctgtctcagacacctgcgggcaatatcgtctagcggggagccgata
gcgattccgatgagaatgctggaagtgttcacctcctccacatccatcgctgatactaac
tacctcaagtctgtatggagatggctcatcgaaaatgactactttgagtgtatgcggtgt
ctgttagagcggaaggttcctgctagcctggagaagagccacactccccccacccctgtg
gcggccagcatctttgagcttatcctgactcctatcagatttgcagaggcttgtaaagat
actttattcagcaaccaggtgttggggagtgtttgcaagtccttgctctgtcccgcatac
tcagagcagatttcccagttcctgattcccgcaatggcctatgggaaatacccattcccg
tttgttgatcttattaccaccttggtcgtacagtgtcgggagagtgggatcggtgaaggt
aaaaacaagggatatggacgaacattggataggagaacgataagggtggatctgacacca
tggttgcttggagcatttgttactctgggggcaaaacaaatagagtcattatcccaggca
aaggtgtcagagtatgtggaggttctgcagtacctcctgccttccctgccttctgctaat
gacccagatgatgatggggactctgactccgaggaggatatggaagtcgaggattatgcc
tccggggcaggcggcctagctgagctacgtgaggactgtctctcagcacttgactctcca
agtcatgtgacccacattgtcgggctggtgggtcgtggggacgcccagctgctgtatgca
gttgcggtcatttgtcacactctcatggcacatcacagatactctatacacagacgaagg
ttactgtacagcctggcctacaacccacagtttatcaagaatctctggcagtgctgtgtc
ggccaaaccatggttactgctacaagaacagaaacatccctgattatgatgttgagtcga
gggttgacaatgtcagagcgagagatgggtcggattgtgccactgttgtccactttctgt
tccatgttcagtcactccctacacacgctacatgatgctgacttttatggggatgataca
ggaaatgcctccagtatgccattcaaccttctggagttgatacagatggtgattgccctt
cgtgatgtgtgtctgggcatcattgagctggcccatcccgacgcaaagccaaccataaat
gacgactacagggtcgcactcaaccgggtcggggtgcccatgagaaaaagcaatgcgaaa
gaaatcagtaaactgacgaaacagtggggctacctgtttaaggtaactgcaggtctggtt
cggcaagtttacacaagagatgcccgacgttctttctgccccaaggacctctggctgtca
gacagagtcaagatacatgctgatgggtcatcacagctatacagatcacaagcttcagtg
ttcacgcaccgtcctttccgcacgatgcagtccctgtcccaggttaatgaagatgatgga
ggcccccctctctccaacaaggatgttaaaaacctggtcattctcactgagcttcccttt
gttgtgtcctttcatgagagggtgaagatcctacagaagttgataaatgcagacagggcg
gattaccagggggagatggaccacttcatgtcggcaaacagtgtcactgttaacatccgg
cgtaactacatctacgaggatgccttcgacaaactctctccagaaaatgagcctaactta
aagctgaaaatgcgagtccagctagtcaatgctgctggcctagatgaggctggtattgat
ggtggtggaatttttcgggaattcctgaatgttctgctcaagacagggtttgatcctaac
agggggttcttcagtcagacaacagaccggctgctctacccaaacccacagtccaagttt
ctaatggaagacttcaccaaacattactatttccttgggagaatgttggggaaggctttg
tatgagaacatgttggtagagctgccgtttgcctcattcttcctgtcaaagatcctgtct
cgacacagcggtgaccttgatattcaccacctggcctccctcgacccggagatgtacagg
aacctgctcttcctcaaacattatgatggagatgttggggagctcggacttgatttcagt
gtggtggataaccagtttggggaaactaagatagaggagttgaaaccaggtgggaagaac
atccctgtgacggccagtaacagaatagagtacattcatcttatggcagactacaaactt
aacaaacagatccgccaccactgtacagcatttcgaaacggtctgtctgaccttataaac
cttgagtggctgcgaatgtttgaccaacaggaactgcaggtgctcatatctggggcagcg
gtccccataaatattgccgacctccgacagcacacaaactatagtgggggatatgcagat
gaccacccaatgattaaaatgttctgggagatagtggaaaacttcacagatgagcagaaa
agacagctgctcaagtttgttaccagttgttcaagaccacccctgctgggattcaaggac
ctttaccctgccctgtgtatccactatggtgggaacgagcctggccgactgcccactgca
agcacctgtatgaatcttctcaagcttccagagttcaaagactttgcctcgctcagagac
aaacttctctacgccatagagtctggggctggcttcgaactcagttga
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