Mya arenaria (softshell): 128214032
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Entry
128214032 CDS
T09995
Name
(RefSeq) NPC1-like intracellular cholesterol transporter 1 isoform X1
KO
K24682
patched domain-containing protein
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
maea04990
]
128214032
Domain-containing proteins not elsewhere classified [BR:
maea04990
]
Other domain-containing proteins
Patched domain-containing proteins
128214032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sterol-sensing
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
128214032
NCBI-ProteinID:
XP_052776207
LinkDB
All DBs
Position
13:complement(41417951..41478663)
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AA seq
912 aa
AA seq
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MERERTEMVEVNEEENTDGVHVTKTYQTTEVVYQEYEPSCLQRCSNRIIRVLETMFYMQQ
QRSIKVGLYVARHPFLTILLSLSLCGLCGIGLMRFEQTTDDAKLWVPKQSRVLPEKAWVD
ENFPQQYRFTSVIVTAYNIFSPTTINSMYDMYLQSRMTFTVDNKNLDYMCVKIGHMCHVK
SLLELWQYNGTIIRSLTLDDILQTVNQKIAYSPTYGTEFSLEYMLGGIRRDNRGKILGAE
SATMLWVLHKNPEFETAALDWEKQMIDMVNAGRPYFAQSYIYATRTFDDEGYGAVKADTS
LLTAGFMIVYVFIILVLGRFNMVENKLYVSLTGIFTIGLSILFSYGLAMGFGFLYGPIHN
MMPFLLLGIGVDDMFVIVGAWQNLSPQEQKLPIDKKMALTLKHAGVSITVTSVTDIVAFA
IGSSTVIPALSAFCAYAAFGILGLYFLVSTFFVAILTLDERRISDNRNSVIFCYKHKNYV
PNSCSKRDIIGSFIKKIYGPTLMKLPCKVCVVIVTAVLVCVNIWSFTMLRQDFNIYDYLP
QDSYATEYVQAQLKYYPDRGFDASIYCDGMDYFVNRRKLEAMYSDVTSDPYIQNGSVVFW
YPAFTNYLKTTQDSMVTSQVKDGFPQSSEAFNSLLLYFLQQREGRSFGQFIKFDNSSTPT
IQATYIPFFHTHQASSAGDIDAMDSLMAILDKANFVNGSCFSYGFKYLNNETNRVLKGEL
YRNLALAGLCVFIVTLLLISNLWTSILVFSCVAFTVIDVTGTLQFWDVTIDTATSILITL
SVGLAVDYSAHVGHMFMTLLGDREDRAKATLCSIGPAVLNGGLSTFLAFVLLANSTSYGF
MLFFRVFMTVVIFGLYHGLVYLPVILSWVGPSPYPSEAKMAPKHNGMADPKHLHDGAKIQ
GNGHVKGCFCTG
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtgaacgaacggaaatggtggaggtaaatgaagaagagaatacagatggtgtg
catgttacgaagacgtaccagacgacagaggtggtatatcaggagtacgagccctcgtgt
cttcaacgatgcagcaacagaattatacgagttctggagactatgttttacatgcaacag
caaagaagcattaaggtaggcctgtacgttgcgcggcatccatttctcacaattctgtta
agtctttccctctgcggcctttgcggaatcggtctgatgcggtttgaacagacgactgat
gatgcgaagctctgggtcccaaagcagtcacgcgttcttccagaaaaggcctgggtcgat
gaaaactttccccagcaatatcgattcacctccgttattgtcacggcttataatatcttc
tcgcctacaacaattaattctatgtatgatatgtatctgcagtctcggatgacctttact
gtcgataataaaaacctggactacatgtgtgtcaagattggtcacatgtgccatgtcaaa
agcctcctagaattgtggcagtataacggcacaatcattcgaagtctaaccctcgatgat
attctccaaacggtgaaccagaagatagcatacagcccaacgtacggtacagaattcagc
ctggaatacatgctaggaggtatacgtcgagataaccgcggaaagattttaggggcagaa
tcagcaaccatgctctgggttctacataaaaatcctgagtttgaaacagctgcccttgac
tgggaaaaacagatgatagacatggtgaatgctggccgaccatattttgcccagtcatat
atctatgcaacaaggacgtttgatgatgagggttacggagcagtgaaggcagacacatct
ctgttgaccgctgggttcatgatcgtctatgtgtttattattctagtccttggaagattc
aatatggtggaaaacaagttatatgtgtccctgaccggtatattcaccattgggctctcc
atcctgttcagctacgggctcgccatgggctttgggttcctctatgggcccatacacaat
atgatgcctttcctgcttttgggtattggtgtggatgacatgtttgtgatcgttggagca
tggcagaatctcagtcctcaagaacagaagctgccaattgacaaaaagatggccttgacc
ttgaaacacgcgggtgtgtcgataacggtgacatcagtcacggatattgttgcgtttgcg
attgggagttccacggtcatcccagctttaagcgctttctgtgcgtacgcagccttcgga
attctgggattatatttcctcgtctcgacattcttcgttgccatattgactctggacgag
cgaaggattagtgataatcgaaactctgtgatattttgttataagcataaaaactatgtg
ccaaactcttgtagcaagcgcgatattataggatcttttataaagaagatctatggaccg
actttaatgaaattaccatgtaaagtatgtgtagttatagtgacagccgtgctagtgtgt
gtaaatatatggagctttactatgttgcgacaggattttaacatctacgactaccttcca
caagattcatacgccaccgagtatgtacaagcccagctgaaatactacccagacagggga
tttgatgcttccatatactgcgatggcatggactactttgtaaacagaaggaaattagaa
gctatgtacagtgacgtaaccagtgacccatatattcagaatggttctgttgtattttgg
tacccagcattcaccaactacctcaaaactacacaagattccatggttacctcacaagta
aaagatggttttcctcagtccagtgaagcatttaactccttgttgctgtatttcctacaa
cagcgggaagggagatcattcggacagttcatcaagtttgataactcttccacaccaaca
attcaagccacatatatcccgttcttccacacgcaccaggcaagctcggcgggtgatatc
gatgccatggatagtctgatggccattttggacaaggccaacttcgtcaatggatcttgc
ttttcctatgggttcaaatatctcaacaatgaaacaaatagggtgttaaagggtgagctg
tatcggaacctggcattggctgggttgtgtgtatttatagtcaccctgctgctgatttcc
aatctctggaccagcatccttgtcttctcatgtgttgctttcactgtgattgatgtgact
ggtaccctgcagttttgggatgtgaccattgatacagctactagcattctgatcaccctg
tcagttgggttggcagtggactattctgcccatgtgggtcacatgttcatgactttactc
ggggatagggaagatcgagcgaaagcgacactttgcagtataggtccagcagtattgaac
ggagggctcagtaccttccttgcctttgtacttcttgcaaacagcacgagttacggattt
atgctgtttttccgggtatttatgaccgtggttattttcgggctctaccatgggcttgta
tacctgcccgtaatactcagctgggtgggcccctcgccctacccctcagaagcaaaaatg
gcgcccaagcataacggcatggctgatcctaaacacttgcatgacggggccaagatacag
ggcaacggtcatgttaagggatgtttctgtacaggctga
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