Mya arenaria (softshell): 128214082
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Entry
128214082 CDS
T09995
Name
(RefSeq) RB1-inducible coiled-coil protein 1-like isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
maea
Mya arenaria (softshell)
Pathway
maea04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128214082
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
maea01009
]
128214082
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
maea04131
]
128214082
03029 Mitochondrial biogenesis [BR:
maea03029
]
128214082
Protein phosphatases and associated proteins [BR:
maea01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128214082
Membrane trafficking [BR:
maea04131
]
Autophagy
Autophagosome formation proteins
ULK complex
128214082
Mitochondrial biogenesis [BR:
maea03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
128214082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
ATG11
TBK1_ULD
PKcGMP_CC
Motif
Other DBs
NCBI-GeneID:
128214082
NCBI-ProteinID:
XP_052776293
LinkDB
All DBs
Position
13:30332065..30371455
Genome browser
AA seq
1513 aa
AA seq
DB search
MLYVFHVDTGTMMTFDMNLAMERVISLQNVIARGCRIAEDKQVLLISGGESLDPSAVVGK
YHAGTDTNPIFLFSKSTIESAIPPSPSVNYGSDIDLQAQVEGSLLMPPAYETVVSRTQLA
LQFQEVDGEELGACEKLIHDQHLQQQGWAAVVANLEDVTGELRQRWETFNESFQQYLECR
ESYRDLIASVSKSLNLLSKIPVLSALTNSQDGTDNSSGSGGVTTSLSRSTLFDWISSQDV
NHTLHDMVEQCGKATEQLDGKVADSLKEQVEHMLAEVENESMKAVKGLEDRLYGLDQIIS
GARKILQEQADLAKGFVQNQNRVSNLRDRSILPDLCSSHRNQLMEMSKNHTRLREIKKKC
RMAKEELSINLHTRLRWVMYIEKKICDVDGKLTIYLGNLRRLRKRLDILQQVQDAPRVYG
QLITEVVRRRQFSLKFLNWAGSLAEDSGRLHTEEMKRREAFLRIIGHHFLQSMFTGFDDY
PPAFATVAPEGFDMLLPEITGEDLKLLKEAVPELSGVLSEPVEDDWLLFTAVKDASALWE
AETTPSLHTLTQATSMKTVSGERLSYSEGSSLQPYSIDNGSKSLGDQFEECMQDEDITKK
PEFISFSPPNDEFLLAKSLSEELTQDMRETNSRIKKAVGTVDVIEDLQLRVGMPGSPTAK
PSPLPHPPVKTRKSLPEMSPDMETSQEFATADFYIDESMPSSIESPPKPCSETKSSTEDC
LAAEKQSNIKLLQELKECNTKLSENEQNLKTLRSIICDSLPSLRQSACDLKQNHSEYVQN
VLSEVQSVRKSMLDQLEKLDANKTASEESMMGKLNEDHSKELKELCDKFDCECAKVSELE
KTLQEIEQDKKKVEEELQSQVKQLQKEKIDIGVKLASDVKDLTLQHELELEVEIDKAKSE
LLVKLASLEKDIEAKDNVIKEKESAIKAIETEKVKSEELLMDKFQKEKETICGILGAEYD
EKLEKAVQEKEEQMQTMKDSVITELTEKHEKEVQKQLDELKQKFSTEKEEVVEMTQSTLC
IEHAKETDEIKQVLIKEKDEEIAQLKKQLEAQYDEMIGKLKSEKDKLEKELKKYEDKSMS
ESTIQTDWSVFRLKQDETQTDDVSVFETHVQTDSQSTMASSMQTEAKDQKDCVMQTSSAQ
MTSSVQTEDISQDSEATKGEKQCSKCGFQTAELRETSDESSSDVESAIKKTVQAEFDQRI
CDLEACHNAEISELISKLEKEKEDAQQLKSSLTSMTGDKQTRFNEVVNRVCKEKDRMIEE
LKAQEQKLLDTIQAHKQESLKLAEEKSKAEGIKERALSLLETKEREFGASHRALESELGL
TRQQVAALKDQLAGVGSDSEGAAAVSPSVEQISDPEQPDLYERIKTLEEEVRAKEEEINK
LQQKVMELSMTASTRSLIQDKVSITSCHVGDLVLLCLDERLDQYVVFTVGSTLHFLHTDC
LPQLGLKSETGDQKKQWLIAEVVDKEYCQAKKANNRFKVPVGTKFYRVKAKKWTRETGHP
SPRKPDTPSASSP
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atgctgtatgtattccatgttgacacggggacgatgatgacatttgacatgaaccttgcc
atggagcgggtcataagtcttcaaaatgtcatcgcccgtgggtgtcgtattgccgaagat
aaacaggtgttgttgatcagtggaggagaaagtctcgacccaagcgctgtggtcgggaag
taccatgctggcacggacaccaaccctatcttcctgttcagtaaaagtaccatagagagt
gccatcccaccttcccccagtgtcaactatggctcagacattgacctacaagcccaggtg
gaagggtctctcctgatgccaccagcctatgagacagtggtgtcccggacacagctggca
ctgcaatttcaagaagtggatggggaggagctaggagcctgtgagaaactcatccatgac
cagcatctacaacagcaaggctgggcagcagttgttgctaacctagaagatgtgacaggt
gagcttcgtcagcgatgggaaacattcaatgagtctttccagcagtacctagaatgtcgg
gagtcatacagagatcttattgctagtgtgtccaagtcactgaatctgctgtcgaagatc
ccagtactatcggctctgacaaactcacaggatggaacagataactctagcggatcaggg
ggagtaacaacatctctgtccagatccacactgtttgactggatcagctcccaggatgta
aatcacaccctccatgacatggtggaacagtgcggaaaagccactgaacagcttgatggt
aaggtggcggactcactgaaggaacaggtggagcatatgttggcagaggtggaaaatgag
agcatgaaggcagtaaagggcttggaagatcgtctttatggtctagaccagataatctct
ggggctaggaagatcctacaggaacaggctgaccttgcgaagggctttgttcagaaccag
aaccgtgtgagtaacctgcgtgatcggtcaatcctgcctgacctgtgctctagccatagg
aatcagcttatggaaatgtcgaaaaaccacacacgcctgcgggaaataaaaaagaaatgc
cgtatggcgaaggaagaactctctatcaacttgcatactagattgcggtgggtgatgtac
attgagaagaagatctgtgatgttgacgggaagttgaccatctacctgggcaacctacgt
cgtctccgtaaacgtctggacattctacagcaagttcaggatgctccgagagtgtacggt
caactcatcacggaggtggtcaggcgaagacagttctccctcaagtttctcaattgggca
ggcagtttggcggaagactccggccgccttcatacggaggagatgaaaaggagagaggca
ttccttcggatcatagggcaccattttctgcagtccatgttcactggctttgatgattac
cctccagcctttgcaacagtggctccagaggggtttgacatgctgttaccagagatcacg
ggggaagaccttaaactccttaaagaggcagtgccagaactctcaggtgtcctcagtgag
ccagtggaagatgactggcttctgttcacagctgtgaaggatgctagtgctctgtgggag
gcagagacaactcccagtctacataccctcacacaagccaccagcatgaaaacagtctct
ggggagaggttatcttactctgaggggtcatccctacagccatactcaattgacaatggg
agtaaatccctcggggaccaatttgaagaatgtatgcaggatgaagacatcacaaagaaa
ccagaattcatctccttctctccacctaacgatgagttcctattggccaagagtctgtct
gaggagcttactcaggacatgagagaaaccaatagccggataaagaaggcggtgggaaca
gtggatgttattgaagatttgcaactgagggtcggaatgcctggctccccaacagcaaaa
cctagccccttgccccacccaccagtcaaaacaagaaaatccttgccagaaatgtcgccg
gacatggaaacctcgcaggaatttgctacagccgacttctacatagatgagtccatgcct
tcatcgatagagtcccctccaaaaccctgtagtgagactaagtctagtacagaagactgc
ctagctgcagagaaacaatccaacataaaactgctgcaagagctcaaggagtgcaatact
aaactaagtgaaaatgaacaaaacttaaaaacgcttaggagcatcatctgtgatagtctg
ccttctttgaggcagagcgcttgtgatttaaaacagaatcattcagaatacgttcaaaat
gtgctttcagaggtgcagagtgtaaggaaaagtatgctggatcagttggagaaactggat
gcaaataagactgcaagtgaagaatctatgatgggaaaactgaacgaggatcattcaaag
gagttaaaggagttatgtgataagtttgactgtgaatgtgccaaagttagtgaattagaa
aaaacgttacaagaaatcgaacaagataagaaaaaggtagaggaagaactgcaaagtcaa
gttaaacaactgcagaaagaaaagattgatattggtgttaagttggcgagtgatgttaaa
gatttaacattacaacatgaactggaattagaggtggaaattgacaaggcgaaatcagaa
ctgcttgttaagttggcttcattggaaaaagatattgaagctaaggataatgtaatcaaa
gaaaaggaaagtgcaataaaagctatagaaactgaaaaggttaagtctgaagaattgctc
atggataaatttcaaaaagagaaagaaactatttgtggaattcttggtgcagaatatgat
gaaaagctagaaaaagctgtccaagagaaagaggaacaaatgcagacaatgaaggattct
gtgattacagaattgacagaaaaacatgaaaaagaggtgcagaaacagttagatgaactt
aaacagaaattcagtacagaaaaagaagaagttgttgagatgacccaaagtacactttgt
attgagcatgcaaaggaaactgatgaaatcaaacaggtactaataaaagagaaagatgaa
gaaattgctcagctcaaaaaacagttggaagcacaatatgatgagatgattgggaagttg
aagagtgaaaaagataaattagaaaaggaattgaagaaatatgaagacaaatcaatgtca
gagtccacaattcagacggattggtcagtgttcaggttgaaacaagacgaaacgcagact
gatgatgtttcagtgtttgagacccatgtacagactgattcacaaagtaccatggcatct
tcaatgcaaacagaagcaaaggatcagaaagactgcgtaatgcagacaagttctgcacag
atgacatcgtcagttcagactgaagacatttctcaagatagtgaagcaactaagggtgaa
aaacaatgttcaaaatgtggttttcagactgctgaactccgtgaaactagtgatgaaagt
agctcagatgttgaaagtgccattaagaaaactgtgcaagctgagtttgaccagcgcata
tgtgacctagaggcttgtcataacgcagagatttcagagctgatttccaagctggagaaa
gaaaaggaagatgcacagcagctcaagtcttcactcacttccatgaccggtgataaacag
acgcgttttaatgaagtagtcaaccgagtctgtaaggagaaggatcggatgatcgaggaa
ctaaaggcccaagaacagaagcttcttgacacaatccaagctcacaaacaggaaagcttg
aagttggctgaggaaaaatccaaggccgagggcatcaaggagcgagccctatcccttttg
gagacgaaagagagggagtttggggcctcacatcgggccttggagagtgagctgggccta
actcgtcaacaggtggcagccctcaaggatcagctggcaggggttgggtctgattctgag
ggtgcggcagctgtgtccccttctgtcgaacagatcagtgatccggagcagccagacctg
tatgaaaggataaagactctggaagaggaggtcagagcaaaagaagaagaaataaataaa
ttacaacagaaagttatggagttgtccatgacagccagtacaaggtctctgattcaggac
aaagtttcaattacaagctgccatgtaggggacctggtcctgctgtgtctagacgagaga
ctggaccagtatgtggtgttcacagtggggtccacactgcatttccttcacacagactgc
ctacctcaactggggctcaagtctgaaactggtgatcagaaaaaacagtggctaattgct
gaagtggttgacaaagaatactgtcaggcaaaaaaggctaacaacagattcaaagtccct
gtgggtacaaagttttaccgggtcaaggctaagaagtggacaagagagactggtcatcca
tcaccacggaaaccagacacaccttctgcctcatcaccttga
DBGET
integrated database retrieval system
