Mya arenaria (softshell): 128214104
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Entry
128214104 CDS
T09995
Name
(RefSeq) uncharacterized protein LOC128214104 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
maea
Mya arenaria (softshell)
Pathway
maea03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
128214104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
maea03000
]
128214104
03036 Chromosome and associated proteins [BR:
maea03036
]
128214104
Transcription factors [BR:
maea03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
128214104
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
128214104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
SAM_2
SAM_Ste50p
zf-FCS_1
Motif
Other DBs
NCBI-GeneID:
128214104
NCBI-ProteinID:
XP_052776326
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Position
13:26117226..26132066
Genome browser
AA seq
1334 aa
AA seq
DB search
MSSRGNDSDEPPVKKQKIDDENVVSDLASISASAPVGPQGQQLIEAGDKSVQAKGAVLQR
PVAVVTSGNIRPTLLLHTSQSVDAQKPNLLYTTDGKVVLQVPQSTSAAIIRSKSPINIPV
SPRLPSPQVITLPSRTQPMTVSARPVIVPTKPITKVTNTSVEQKSGAPVQRFILAGTPPS
SEHPVQISPGQTQISFQVPVNWNGSGKSLLDSSKVSLVNISQADGSGRSLLQGSAIDGSG
LQHVASVGVKTSSYAQGNIPRVTAVPQVQQAKSGASVPKIILQPGSGGSVIKSSPISIPT
TNAPAKAYITGNKLFGNLGSGQVISQSPSGVIMVTRPGLASPTSKPLPKVHGSLVINNKP
HTIMQGGSNPSAVQIMGKDGKGKMAMNEAQIMLPSGPKKIAVHYQVGTTITTTEGKQIIV
KSPYPVSQGKTIIQKTMSSPQMTFTDFKTSSVTSISAPITAKVVDASPSKSVMKTTVLAS
QKNWELVKQSSQLMSQSNNGSTFNQYTNIKASDIKTPEKPKAVSEASVTENVDRERKLSE
EIDHLGSKTSDNSTEAVKANCGSPDRVKHDGNVEERMEVDDVDGAKGVGDIGNSSQENRS
EEVETTAQGVDNGAENYTNYPDAAQDDSVVDLDELKATGGGGQEEINDGLECNETLNTSD
ELEPMDTHGVGKLGGTGGHQSESQQEVTNKDEISQCENCSEYGFTTDFLKDGRFCSQTCV
SAFDGRHQRDAKKQGTISKVIMGMKKGGRKKQLLLKEREERNNGAQGEKQEDHNNYGKKS
WTKSFVWARYLAEEHAVEAPARFFKNPFPTVKNLFRVGMKLEGTDPNHQSKYCVLTIAQV
CGYRVRIHFDGYSECYDFWTDIDSPYIFPVGFCEKHGKSLQPPKAAFYYSAENFSWVSYL
KATKASPAPKSLFSNQPVVSVTPNLFRVGSKLEAVDKKNSSLICVASVADTMGDKVLIHF
DSWEDNYDYWCDTSSPLIHPVGYCEENELVLSPPQDWPDISDFTWPKFLAKTKSQAVPAR
AFKPRPAIAFEPGMKVEVVDKRNPLLVRVATIAEVENNMVKIHFDGWLDVYDYWLEEDSP
DIHPPGWCAKTNHPLMPPITEADLVVRTGPGICPTPGCKGIGHIKGPKYTGHHSTFGCPY
SEINMNKELVMGDRLGPPSKDEQRFLDRADSPEPGGYKMVKKPQLSPEGKKMGRGRKPKS
YYQALEGQKIERDRLESEDTFRQGIHNSVFASSLISPPKPDVPLCWEQHCKLLPGVTNIR
GNDVNKWSTEQVAAYINTLPGCEEQAKLFKEEQIDGEAFLLLTQSDIVKIMNIKLGPALK
IFNSIIMFKNSIEV
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgagttcacgtggaaatgacagtgatgagcccccagtcaaaaagcaaaaaattgatgat
gaaaacgttgtttctgaccttgcatcaatttctgcaagtgcccctgtagggcctcaaggt
cagcaactaatagaggctggagacaagtcagtccaggcaaaaggagcagtcctgcagcgt
ccagtcgcagttgtgacctcgggaaacatccgacctacactgctgttgcatacatctcag
agtgttgatgcacaaaagcctaatttgctgtacacaacagatgggaaggttgtacttcag
gttcctcagtctacatcagctgctataatccgctccaagtctcccatcaatattccagtc
tcccctcgactaccttctccacaggttatcacactgccatcaaggactcagcctatgaca
gtgtctgcacgaccagtcatagtgcccaccaagcctatcaccaaagtaaccaataccagt
gtggagcaaaagtcaggtgctcctgtgcaaagattcatacttgccggtacccctcccagt
agtgaacatcctgttcagatatcgcctggccagacacagataagtttccaagttccagta
aattggaatggatcaggaaaatccctactggactcttctaaggtgtcattggtcaacatc
agtcaggctgatggtagtggaaggtctttgttgcaaggatcagctatagatggttctggt
ctccagcatgttgctagtgtgggggttaaaacctcatcttatgctcaaggaaatattccc
agagttactgctgtcccccaagtgcagcaggcgaagagtggagccagtgtaccaaagatc
atactacaaccaggctctggtggttctgttatcaaaagttctcccatatctatacccact
accaatgctccagctaaggcgtacattactggaaataagctttttggtaatcttggatct
gggcaggttatatctcagtcacccagtggtgtgatcatggtgaccagaccgggtttagct
tctccaacttctaaacctttacccaaagttcatggaagccttgtcataaacaacaaacca
cacacaatcatgcaaggtggaagtaatccaagtgctgtacagattatggggaaagacggt
aaaggcaaaatggcaatgaatgaagctcagataatgttaccttctgggcctaagaaaatt
gctgttcattaccaggttggaacaaccattacaaccacagaaggaaagcagataatcgtg
aaatctccataccctgtttctcaaggaaagacaattatccaaaaaaccatgtcttctcct
cagatgacatttacagattttaaaacttcatcagtcacttctatatctgcacccataacg
gctaaagttgttgatgcaagcccatcaaaaagtgtgatgaagacaacagtgttagcttct
cagaaaaactgggagctggtgaaacaatcctcacaacttatgtcacaatcaaacaatggt
agcacttttaatcagtacactaacatcaaagcatctgacattaaaactcctgagaaacca
aaagctgtctctgaagcatcagtcactgaaaatgtggacagagaaagaaaactgagtgaa
gaaattgatcatttaggtagcaaaacaagtgataattcaactgaggctgttaaagcaaat
tgtggtagtccagacagagttaaacatgatggtaatgtggaggagaggatggaagtagat
gatgttgatggtgctaagggtgtaggtgacattggaaacagtagtcaagaaaatagaagt
gaagaggttgaaactactgcacaaggagtggacaatggagctgagaattataccaactat
cctgatgcagctcaagatgacagtgttgtagatctggatgaattaaaggcgactgggggt
ggtggacaggaggagataaatgatgggcttgaatgcaatgaaactctaaacactagcgat
gaattggaacccatggacacacacggagtggggaaattaggcggcacaggtgggcaccaa
tctgagtctcagcaggaagtcactaacaaggatgagatttcgcagtgtgaaaactgcagc
gagtacggttttaccactgatttcctaaaggatggccgcttctgtagtcaaacatgtgtc
agcgccttcgatggcaggcaccagagggatgcaaagaagcagggtacaatctccaaggtg
atcatgggaatgaagaaaggtggtcgtaagaaacagctgctgttgaaggaaagggaggag
aggaataatggggcacagggagagaagcaggaggatcataataactatggcaaaaagtct
tggacaaaatcttttgtctgggcccgataccttgccgaagagcatgcagtggaggcacca
gcgaggttctttaaaaacccattccctactgtaaaaaacttgttccgagttgggatgaaa
cttgaaggaactgatccaaaccatcagtcaaaatattgtgttctaacaatagctcaagtg
tgcggatatcgtgttcgcattcattttgatggatattccgagtgctatgatttctggacg
gatatagactctccatacattttccctgttggcttttgtgaaaaacatgggaaatcttta
caacctcccaaagcagccttttattattcagcagagaatttttcatgggtgtcatatttg
aaggcgacaaaggcatctccagccccaaagtctttgttctccaatcaaccagttgtgtct
gttactccaaacctcttccgcgttggttccaaacttgaagcagtcgacaagaagaactct
tccttaatctgcgtagctagtgttgctgacacgatgggggataaggtgctcatccacttt
gacagctgggaagacaactatgactactggtgcgacacatcctccccacttatacatcct
gttggctactgtgaggaaaatgagctggttctctctcctccgcaggattggccggatatc
agtgacttcacctggccgaagtttctggctaaaaccaagtcccaggcagtcccagctaga
gcattcaaaccacggccagctatagcgtttgaaccaggcatgaaagtggaagtggtggat
aaacgtaacccattgttggtgcgtgtagctacaatcgctgaggtggagaacaacatggta
aagattcactttgacggctggctggacgtctatgactactggctggaggaagactcacct
gacattcaccctccaggctggtgcgccaaaaccaaccacccccttatgccacccataacg
gaggctgacctggtagtgaggactggccctgggatttgcccgaccccagggtgtaaaggc
attggccacatcaagggaccaaaatacacaggccaccacagcacatttggttgcccatac
tcggaaatcaacatgaacaaggagttggtaatgggagaccgccttgggccacccagtaaa
gatgagcagaggttcctagatagggcagactcaccagaacccggtggctataagatggtt
aagaagccccagctgtcaccagaaggcaagaagatgggccggggcaggaaaccaaagagc
tactaccaagcactggaaggtcaaaagattgaaagagatcgattagaaagtgaggataca
ttccgacaaggcatccataattctgtgtttgcgtcatcgttaatctccccgccaaagcct
gatgttcccttgtgctgggaacagcactgtaagttgttgccgggggtgaccaatatccgt
ggtaatgatgtaaacaaatggagcacggagcaggtggctgcatacatcaacactcttccc
ggctgtgaagaacaggcgaaactcttcaaagaggagcaaatagatggagaggcattcctg
ttgttgacacagtctgacattgtgaagataatgaacattaaacttgggcctgcattgaaa
atattcaacagtatcatcatgtttaaaaactccattgaagtttga
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