Mya arenaria (softshell): 128214183
Help
Entry
128214183 CDS
T09995
Name
(RefSeq) nuclear pore complex protein Nup155-like isoform X1
KO
K14312
nuclear pore complex protein Nup155
Organism
maea
Mya arenaria (softshell)
Pathway
maea03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128214183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128214183
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128214183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
DUF6381
Motif
Other DBs
NCBI-GeneID:
128214183
NCBI-ProteinID:
XP_052776485
LinkDB
All DBs
Position
13:complement(25177243..25209260)
Genome browser
AA seq
1366 aa
AA seq
DB search
MSYGNMTTAGMSHQDMLEGAGRLVDKHLLEDRTSLDLSELFKVPIHSQPTVSGLHDFDYP
SLLDTGVGLEGLSEISQIKRVPLPPELVEQFSRMQCNCMMGLFPDIDRAWLSIDSDIFVW
KFEDGGDLAYFDGINETILSAALVKPRKGIFQSHIQFLLVLATPVDIVLLGVSFSHTNSE
YDEMHLLPEPLFSIPTDNTYIMNIVGTESGRIFMAGKDGCLYELAYQADDGWFSRKCRKI
NHSTSTLSFLVPSFLNFSFGEEDSLVQIKVDNTRNILYCRTEKGTIQVYDLGVDGRGLSK
VASIPLQNIVHNASHVARTIDRSNFKPLVHIAPIPSTESTNVHLVAITQTGVRLYFTTNP
FGSQKGRPSMLTLIHVRLPPGFLTSAAPQRPNNIHMAYYQQGCMLLMASQSENSDLLWTV
GSDSFPFHNQLMESHTTVPVDGRTWSVCEVEYQRPSQTEGDINGRDPPVVVTQHAQPPRK
FVVLSAQGSHIVSKLRPVDQLRQLLIDCQGPDADEVKAFFRLHKIEQACATCLILACNRL
ASDQQVADWAKMAFFQYGGEAVYTYGAGDRQMMPSNIGPAGGGYGSMSMYSPGPQQQHSF
TLPTPMQGMHPTQASTPMMYGAQPMYPPMDMTMQGGPGFIQNISFSGKHNGICLFLSRIL
RPIWEMSVTKEFPCQTPEGTIVYLTCNFASEDLGFILDNVRELSDFVDFNSKFDMGPSDM
GGMGGVPFTPHIMGHMDEQTRRKLQVEAQKLEKVSLQHVQELIHRVEEVLGLLRVLVDHQ
FHTLAACLTKDQQNQLKTLSLKQFAITGKELCGSMIQNLINRYIDDNATTDAISIRLREI
CPSLYSTDDATCSKANEMLQAAKLSQSPAERRQRLMEALRLYKNVNQPLALSEVCNQFAS
VHFYEGIVDLCLTMANKRDPQRLALHFYHDDMPEDMQGVQELMARKDCYKCITETLGYLM
TASVPQGATVIPKSPGPPPAPDASRMSIEDADHYKNEVFRLALKSDDELFHVSLYEWLFN
MNMTEKLLEIQTPFLEPFLKQRSSYQAGDVAALDLLWKYYEKIENYPAAARILARLAERH
GTDVDLQKRIVLLSRAIMCAKSATSRVASAAEGEFLHELEEKMEVARLQMNVLRALSQET
IGGPNVQEAISKLESDLLDITMLYEEFADRFDLSECKLAIVNCAGLYDSALIENLWQNIV
DKEFENTRSSATSVRVKNIGNKLCAVGKTYFKAERYFPFPFITKYLEQRSCENGMDVGWV
YQLMLDIGVPALRLLELYDRMFKSRDPFWSSVDRPWHLLHVIHHFLNKLASNTAVIPLYE
RRQFSTLGLDYIACYLVELQSVSSVDPNVRTLVQSFRNLQGKMERL
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatggaaatatgacaactgccggcatgtcacatcaagacatgctggagggtgca
ggcagactggttgacaagcatttattggaagaccgaactagtctagacctttcagagctc
ttcaaagttcccatacatagtcagccgacagtgagtggtcttcatgactttgactatccc
agtctgctggacaccggtgtggggttggagggactgtccgaaatctcgcagatcaaacgt
gtgcccctcccgccagaattggtggaacagtttagccggatgcagtgtaattgtatgatg
gggctgtttccggacattgaccgggcatggctgtcaattgacagtgacatctttgtgtgg
aagtttgaagacggtggagatttggcctattttgatgggataaatgagacaatactgtct
gcagcattggtgaagccaaggaaagggatattccagtcccacattcagttcctgctggtc
ctggcaacccctgtggatattgtccttcttggagtcagcttttcacatacaaattcggaa
tatgatgaaatgcatctcctcccggaaccactcttctccataccaactgacaacacttac
atcatgaacattgtgggaactgaaagtggacgcatatttatggctggaaaagatggatgc
ctgtatgaattggcttaccaggcagatgatggatggttcagccgtaaatgtcgaaagatc
aaccattcgaccagtaccctctcgtttcttgtaccatctttcctcaacttctcatttggc
gaggaagactcactggttcagatcaaagttgacaacactcgaaacatcttatactgtcgc
acagagaagggcaccatacaggtgtatgaccttggagtggatggaaggggcctgtcaaag
gttgcatctatacccctacagaatatagtgcataatgcttcacatgtggccagaacaatt
gacagatctaacttcaagccactagtccacattgcaccgataccaagcacagaatcgaca
aatgtacatctggtggccatcacacaaactggtgtgcggctgtatttcaccaccaaccca
ttcggaagtcagaagggtcgccccagcatgttgacgctgatccatgtacgtctcccgcca
ggatttctcacgtctgccgctccacagaggcccaataatatccatatggcctactatcaa
caaggttgcatgttgttgatggcctcacagagtgagaattctgacctgttgtggacagtt
ggcagcgattccttcccatttcacaaccagctcatggagtcacatacgacagtgccagtg
gatggaaggacatggtcggtgtgtgaggtggaataccagagaccttcacaaacagaaggg
gatattaatgggcgggatcctccagtagtggttacccaacacgcccagccgcccaggaag
tttgtggtcttgagtgctcaggggagccacatagtgagcaagctgcggccggtagaccag
cttcgacagctgttgattgactgccaagggcctgacgctgatgaggtgaaggccttcttc
agactacacaagatagagcaagcctgtgccacatgtcttatcctggcttgtaaccggctt
gcctcagaccagcaggttgcagattgggccaagatggcctttttccaatatggaggagag
gcagtttacacatacggagccggggatcggcaaatgatgcctagcaatattgggcctgca
ggtggtggttatggcagtatgtccatgtacagccccggtccccagcagcagcacagtttc
accctacctacccccatgcaaggcatgcacccgacccaggcttcaactcccatgatgtat
ggagcccagcccatgtacccacccatggacatgacgatgcagggcggccctgggtttata
cagaacatatccttctccggaaaacacaatggcatctgtctgttcctttcaagaatactc
agacctatatgggagatgtcggtcactaaagagttcccctgccaaacaccagaagggacc
attgtctatctaacctgcaactttgcgagtgaagaccttggattcattctggacaatgtt
agagagctgtctgactttgtggactttaattctaagtttgatatgggaccttcagatatg
ggtggtatgggaggggtcccctttacccctcacatcatgggccacatggatgaacagact
aggagaaaattgcaagttgaagctcagaagctggagaaagtctcgcttcaacatgtgcag
gagctgatccacagagtggaggaagtgctgggtctgttgagggtgttagtggatcaccag
ttccacacactggctgcctgccttacaaaggaccaacaaaatcagctgaaaactctctcc
ctgaaacagtttgccatcactggaaaagagctgtgtggaagtatgatacagaacctgatc
aatcgctacatagacgacaacgccacaacagacgccatcagtataaggttaagggaaatc
tgtccttccctctacagcactgatgatgctacttgctctaaggcaaatgagatgctgcaa
gcagccaaactgagtcagagcccagcagagaggaggcagcgacttatggaggcacttagg
ttatacaaaaacgtcaaccagcccctggccttgtcagaagtgtgtaatcagtttgccagt
gtccacttctatgagggcatagtggacctgtgcctgactatggccaacaagcgtgaccca
cagaggttggccctgcacttctaccatgatgacatgcctgaagatatgcaaggggtacag
gagcttatggccaggaaagactgttacaagtgtatcacagagacactgggttatctgatg
acggccagtgtgcctcagggtgccactgttatacccaagtctccgggtccccctccagca
ccggacgccagcaggatgtccatagaggatgctgatcattataagaatgaagtgttccga
ctggccctgaagtctgatgatgagctgttccatgtctctttgtatgagtggctgttcaat
atgaatatgacagaaaaactactggagatccagaccccattcctagagccattcttgaag
cagaggtccagctaccaagccggtgatgtggcagcccttgacctgctttggaaatattac
gagaagattgagaattaccctgcagctgctagaatattggccaggctggcagagagacat
ggtactgatgttgatctccagaagaggattgttcttctttcacgagccattatgtgtgcc
aagagcgccacatctagggttgcgtcggctgcagagggagagttcttgcatgaacttgag
gaaaaaatggaggttgcgagactacagatgaatgtattacgtgcactgagccaggagaca
atcggtggtccaaatgtccaggaagccatctcaaaattggagtctgacctccttgacata
acaatgttgtatgaggagtttgcagaccggtttgacctgtctgagtgtaagcttgccatt
gtcaactgtgccggcctgtacgacagtgccctcattgagaatctctggcaaaacatcgta
gacaaagagtttgagaacacacggtccagtgcaacttctgtgagggtaaaaaacatcggc
aacaaattgtgtgcagttgggaaaacttacttcaaggcagagcgatattttccattccca
tttattacaaagtacttggaacagcgtagttgtgagaatggtatggacgttggatgggtg
taccagctcatgttggacattggtgtgcctgcgctaaggctgctagaactgtatgaccgc
atgttcaagtcaagggaccccttctggtcaagcgtggaccggccatggcatctgttacac
gtgattcaccatttcctgaacaagcttgccagcaacaccgctgtcatacccttgtatgag
agacgtcagtttagtaccctgggtcttgactacattgcctgctatctggttgagctacag
tctgtcagcagcgttgaccccaacgttcgtaccctcgtacaaagcttcagaaatttgcag
ggcaagatggagagattgtga
DBGET
integrated database retrieval system
