Mya arenaria (softshell): 128214257
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Entry
128214257 CDS
T09995
Name
(RefSeq) ATP-dependent DNA helicase PIF1-like
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maea03032
]
128214257
03029 Mitochondrial biogenesis [BR:
maea03029
]
128214257
Enzymes [BR:
maea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
128214257
DNA replication proteins [BR:
maea03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
128214257
Mitochondrial biogenesis [BR:
maea03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
128214257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
PH_LRR1
AAA_30
Pif1_2B_dom
AAA_19
AAA_22
AAA_16
UvrD_C_2
Mg_chelatase
Herpes_Helicase
PhoH
AAA_5
ABC_tran
AAA
NACHT
AAA_7
T2SSE
nSTAND_NTPase5
AAA_29
P-loop_TraG
Motif
Other DBs
NCBI-GeneID:
128214257
NCBI-ProteinID:
XP_052776592
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All DBs
Position
13:62034775..62046438
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AA seq
642 aa
AA seq
DB search
MALSSISCTGIYEELNTKGETLRKMQHKNVTLSLGRNEFKDVILCINFPSKREMKYTLRE
MQIHKKFAKDGKATIKLPNESAQVMISNCAPDQLIMFLKTMTTKLECLRKKGFVSDRLKW
KSDLPRTFDEISPLTLRDLKEANEVKVKAAERLEDFTPKGKRKRMASDEKENMQPTGAKM
ARKLITTTDEKGAIGLRDSSRLLAAIENPVKLNKEQNAVLEAVRSGRNIFFTGSAGTGKS
FLLRRIIGALAPQHTFPTASTGVAACHIGGTTLHQFAGVGSGQGSLEQCIELASRTQIAQ
QWRKCHHLIIDEISMVDGDFFDKLETVGRVIRKSDKPFGGIQLIICGDFLQLPPVTKGEE
RRKFCFQSKAWRKCIDMNMELTDVRRQSDKTFISVLQNIRMGRCPEFVYTTLRGTAQNNI
QQNGILATQLCTHKEDVNQINNFQLKKLTGPSKSYEATDSDEVYLKQINFLSPVPATLTL
TVGAQVMLAKNVDITKGLVNGARGVVIGFETGSECNPIVKFLCGLETAVKPTRWTFKVSG
GVLLTRKQIPLKLAWAISIHKSQGMTLDCVEISLSKVFESGQSYVALSRAKSLEGLRVLD
FDRKCVRADPEVLKFYHKMGLKQKMLSGTIELESDIKRPKHW
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcattgagttctatatcatgcacagggatttatgaggaattgaacaccaaaggtgaa
acactaagaaagatgcaacacaaaaatgttaccctttcacttggccgtaatgaattcaag
gatgtaattttgtgcattaatttcccaagcaaacgagaaatgaaatacactctcagggaa
atgcaaattcacaagaagtttgccaaagatggaaaagctacaattaagttgccgaatgag
agtgcgcaagttatgatttcaaattgtgccccagatcaattgataatgtttttaaaaact
atgacaacaaaactggaatgcttaagaaagaaaggttttgtgagtgatcgactgaaatgg
aagtcagatttgcctcggacatttgatgaaataagtccactgactttacgagatttgaaa
gaagcgaatgaggtgaaagtgaaagcagcggaaaggttggaggattttactccgaagggg
aaaagaaaacgtatggcaagtgatgaaaaagaaaatatgcagcccactggagcaaagatg
gcgaggaaattgattacaacaacagatgaaaagggagcaatcggtctccgagactcaagt
cgcctgttggctgctatcgagaatccggtgaagttgaacaaagaacagaatgctgtgctc
gaagctgttaggagtggtcgcaacattttctttacgggcagtgcaggaaccggaaagtca
ttccttctgcgaagaatcattggtgccctagcccctcagcacacatttccgacagccagt
accggagttgcagcctgtcatatagggggaacaactctgcaccagtttgctggtgttggc
tccggacagggtagcctagaacagtgtatagagcttgcctcgcgcacccagatagctcag
cagtggcgtaaatgtcaccacctcatcatcgacgaaatctccatggttgatggtgacttc
tttgacaaactggaaactgtgggcagggtaatccggaagtctgataagccatttggcggg
atccagctgattatctgcggcgattttctgcagctacctccggtcaccaagggagaagag
cgacgcaagttctgctttcagtcaaaggcttggagaaagtgtatagatatgaacatggag
ctgacagatgtacgcagacagtcagacaaaactttcatcagcgtcttgcagaacattcgt
atgggaaggtgtcctgaatttgtatacacaacactacgaggaacagcgcagaataacatc
caacagaacggcattctcgccacacagctgtgtacgcacaaggaagatgtgaaccagatc
aacaactttcagctgaaaaaactcacagggccctccaagtcctatgaagcaacagacagt
gatgaggtttatctgaagcagatcaacttcttatcacccgtgccggcaacactgaccttg
actgtaggggcccaggtaatgttggcgaagaatgttgacatcacaaaggggctggtaaat
ggagccaggggtgtggtcattggatttgagacggggtcggaatgcaacccaattgttaaa
ttcctgtgtggcctcgagacagctgtgaagcctacaaggtggacgttcaaggtctctggc
ggtgtattactcacccgtaaacagatacctctcaagctggcctgggcaatctccatacac
aagagtcagggcatgaccttagactgcgtagaaatctcattatccaaagtgttcgagtct
ggccagtcatacgttgccctatctcgtgccaaaagcctcgagggactgagagttctcgat
tttgatcggaaatgcgtgcgggctgatccagaggtgctgaaattctaccacaaaatggga
ctcaaacaaaagatgttgtctggcacaattgagctagagagcgatattaaaaggccaaag
cattggtga
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