Mya arenaria (softshell): 128214500
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Entry
128214500 CDS
T09995
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
maea
Mya arenaria (softshell)
Pathway
maea03018
RNA degradation
maea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128214500
09123 Folding, sorting and degradation
03018 RNA degradation
128214500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128214500
03041 Spliceosome [BR:
maea03041
]
128214500
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128214500
mRNA degradation factors
5'-3' decay
Lsm complex
128214500
Spliceosome [BR:
maea03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
128214500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
128214500
NCBI-ProteinID:
XP_052776958
LinkDB
All DBs
Position
13:27744214..27752188
Genome browser
AA seq
136 aa
AA seq
DB search
MLPLSLLRTAVNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDRFWRMPECY
IRGSTIKYLRIPDEVIDMVKEEVIQKSKGRGEMRGRGGGPQRGRGGRGAFGRGGNRGGGG
GGRGGGGGRGGKGRGE
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgctacccttatcacttctgaggacagctgtgaaccatcccatgctggttgaattgaag
aatggggaaacatacaatggtcatcttgtcagctgtgataactggatgaacatcaacctc
agggaagtcatctgtacatccagagatggagaccgtttctggagaatgccagagtgttac
atacgaggcagcaccatcaagtatctgcggattccagatgaggtcattgacatggtgaag
gaggaggtcatccagaaatcaaagggccgtggagagatgagagggcgtggtggcggtcca
cagaggggtcgtggaggaagaggagcttttggaagaggtggtaaccgaggaggaggtggt
ggcggtcgcggaggtggaggcggaagaggaggaaagggtcgaggagaataa
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