Mya arenaria (softshell): 128214600
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Entry
128214600 CDS
T09995
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
maea
Mya arenaria (softshell)
Pathway
maea03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128214600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
maea03009
]
128214600
Ribosome biogenesis [BR:
maea03009
]
Eukaryotic type
Pre-60S particles
RNases
128214600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
128214600
NCBI-ProteinID:
XP_052777122
LinkDB
All DBs
Position
13:complement(66478453..66492340)
Genome browser
AA seq
1310 aa
AA seq
DB search
MFKNTGLFKDVPCPYFLFGLCERPYCHFRHSKHEEAKARIEVEKLSNLYKEADENETAPQ
PASSLQRTLIDIENSIKNEKKIIENHDKPEPTEPTKVVAKLKNNKPTGTPEYNPTPLTEL
KEKQSKGELKSGRSKYDLALLDEPETDSEYDPACNYSTKFSSVSYSHNSVTHQESDRLPE
YAQSLGAGIKRKSETDENDDSQLAKIPKFMSVSYTPALNESTELSEEEPIGQPEDWFSDE
QSDKDSLIGVQHNSADDKVSNPATSNKIDTKKTDKENAQNILPIEFNKDGSVKYLSDITS
EKSASDNKKPKPKSQQKEKKVVHNESVTDDNETEIPDKGGGNIFNLFKAEFDSALETCAD
DETTDIGIEDKKHKVKHKSGSDKTKAIEKSESSKKVTEKHNVKPRSDKVSELSNDRKRNH
SSDKNKSSVKNGVHKPDLSPLKHKHSSSGTERHKHLQNMEDTSDKPSHEHANHKQTKHKH
SLSSTPGSKHRSSSGDKVSSSQEKLSSSGVKHSSSSQKHGPTYKHRHSSSDHHKPLSSND
KHSSSNSVKTHSSSDKHNSSRSNSEKAHSNKDKNTSVSSQQKNRSVSAKHTSSSLPKQSH
KISSSSEKSSKLKLSKTERHRSGEKSPRAGTSSNKIHKDRDGSRAHSSSSNKSSGSKSTP
DRVRQHSSSSKKKNILNLDVDLFGDVNNHGGAAGELSDYDSDLEKYFTDEDPFDECLRIF
NEEPRKSHTAGASDRKKLKRPAPEDPEPPPVGGKKRIALKESDPEARKKKIDNRPQPKPS
PAQVMLNRYRQMQEKVLREEEQHKEKVKVKVKQIQQKNREKAVNSTAPPKPSLASASATF
TTYMANKNKKTSATTVGKGVKRTAHAPTIPIAKLKRPTVEVNTSSKVATNVRQRYLNMFI
DEFLKTCANEEEAYNKGKAEEQAVFKRCSNKNVYLNIAVNTIKRLRTAVLEGSGKKTGHV
TQVKMSHASMLDGSGPGASKATYTVNRSGGGVKIREEDFEGVELYRRLKPYILTEEQLRE
NNFPRPDPEKGGSAVFYGEQQYTQKAALKGYEKLCVRCGKVFEVYPNGKYPVKQECVYHW
GKAWKKKIAGAIDTRYTCCQGDLASEGCQVAKLHVHESNKKTETMSGFMKTIPASPAIDG
DYGVYALDCEMVYTTMGIELARVTVVGPDQEPAYESLVLPDNRIVDLNTRFSGISEDDME
DVTTTIRDVQAVLLSLFSDQTILMGHSLESDLMALKMIHNTVVDTSVVFPHRMGRPFKRA
LRNLMVEYLKKIIQDDVGGHDSLEDANACLQLMQYKLKDDERKEARRLSS
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaacacaggccttttcaaagatgtcccatgtccatacttcttgtttggtctc
tgtgaaagaccgtactgccattttagacattctaaacatgaagaagcaaaagcacgtatt
gaagttgagaagctatccaatctttacaaagaagcagatgagaatgaaacagctccacaa
cctgcatcatccctgcagagaactctcatagatattgaaaacagcataaaaaatgagaag
aaaattattgaaaaccatgacaaaccagagcctacagaaccaactaaagtagttgcaaaa
ttgaaaaacaacaagccaactggaactccagaatataatccaacacctcttacagagctg
aaggaaaaacaaagtaaaggagagcttaagtcaggtcgatcaaaatatgatctagctttg
cttgatgagcctgaaactgacagtgagtatgacccagcctgtaattattcaacaaaattc
tcttctgtatcctattctcataattctgtgacccaccaagagtcagacagattgccggaa
tatgcacaatctctaggagcaggaattaaacgcaagtctgaaacagatgagaatgatgac
agtcagcttgccaagataccaaaatttatgtcagttagttatacaccagctttgaatgaa
tcaactgaactttctgaggaagaacctataggtcagcctgaggattggttttctgatgaa
caaagtgataaggatagtttgattggagttcagcataattcagcagatgataaagtcagt
aaccctgcaacatcaaataaaatagatacaaaaaaaacagacaaagagaatgcacaaaat
attttgccaattgagtttaataaagatggatctgtaaaatatttgtctgacattacgtca
gaaaagtcagcttcagataataaaaaaccgaagccaaaatctcaacaaaaagagaaaaag
gtagtgcataatgagtcagtgactgatgataatgaaactgaaatcccagataagggtggt
ggtaatatttttaatctgttcaaagcagagtttgatagtgctcttgagacctgtgctgat
gacgaaactactgacataggtattgaagacaaaaaacacaaagttaaacataaatctgga
agtgataaaacaaaagccattgaaaaatcagaatccagtaagaaagtgacagaaaagcat
aatgtgaaaccaagatctgataaagtttcagagttgtctaatgacaggaaaagaaatcac
agttctgataagaacaaaagttcagtgaaaaatggtgttcataaacctgacttatcacct
ctgaagcataaacattcatcatctggaactgaaagacacaaacatttacaaaacatggaa
gatacttctgacaaaccatctcatgaacatgctaatcataaacaaacaaaacataaacat
agtttatctagtacccctggtagcaagcatcgttcctccagtggtgacaaagtaagttct
tcacaagaaaaactctccagctcaggggttaaacattcatcatcaagccaaaaacatgga
cccacatataaacacagacatagttcatcagatcatcataagccactctcaagtaatgat
aaacatagttcatccaatagtgtgaagacacattcaagctcagataaacataattctagt
aggtccaacagcgaaaaagctcattcaaacaaagataaaaacacttctgtatctagtcag
cagaaaaatcgttctgtcagtgctaaacacacttcatctagtcttccaaagcaaagtcat
aaaatttcatcatcgtctgaaaaatcctcaaaactaaaactgagcaaaactgaacgccat
agaagtggcgaaaaatctccaagagcaggtacaagtagtaataaaatacacaaggacaga
gatgggtccagagctcatagcagcagcagcaacaagagttcaggctccaaatccacccct
gacagggtacgtcaacattcatcctcatccaagaagaaaaacatcttaaacttggatgtg
gatttgtttggtgacgtaaataatcatggaggggctgcaggcgagctctcagactacgat
tctgacctggagaaatacttcacagacgaagatccctttgacgagtgtctgagaattttt
aacgaagagccaaggaaatcacacactgctggagcttcagatagaaagaagctgaagcgc
cctgcacctgaggaccctgaacctccaccagtcggtggcaagaaacgcattgctctcaaa
gaaagtgaccctgaagccaggaaaaagaagattgacaatcgcccccagcctaagccatca
cccgcccaggtcatgttgaatcggtaccgtcagatgcaggaaaaagttttacgtgaggag
gagcaacataaggagaaggtcaaggtcaaagtgaagcaaatccagcagaagaacagggag
aaggcggtcaattcgactgcacctccaaagccatccctggcaagtgcctcagcaactttc
accacatacatggctaacaagaataaaaagacatcggcaacaactgtcggcaagggggtg
aagaggactgctcatgctccaaccataccaattgcgaagctgaagcgtcctacagttgag
gtcaatactagctcaaaggttgccacaaatgtcagacaacgctacctcaacatgttcatc
gacgaattcctcaaaacatgtgcaaatgaggaggaagcttataataagggaaaggcagag
gagcaggctgtattcaaacgctgctcaaacaagaacgtgtacctgaacattgccgtgaac
acaatcaagcgtctccggacagcagtgttagaggggtcaggaaagaagactggtcacgtg
acccaggtgaagatgtcacatgcctcaatgctggatgggtcaggcccgggagcctctaaa
gctacctacactgtgaaccgttcaggaggtggagtcaagatcagggaggaggattttgag
ggggttgagctgtaccgtcgcctcaaaccgtacatcttgacggaggaacaactgagggag
aacaactttccccggcccgaccccgagaagggagggtctgctgtgttttacggggagcag
caatacacgcagaaagctgcattaaaaggttatgagaagttgtgtgtgcggtgtgggaag
gtgttcgaggtctaccctaatggtaaataccccgtgaaacaggagtgtgtctaccactgg
gggaaggcttggaagaagaaaattgctggtgcaatagatacacggtacacctgttgtcaa
ggagatctggcctcagagggctgtcaggttgctaagctgcatgttcatgaaagcaacaaa
aagaccgaaaccatgtcagggttcatgaagacaattccggcgtcaccggctattgacggg
gattacggagtgtatgccctcgattgtgaaatggtgtacacaacaatgggcattgagctt
gcacgtgtcacggtggtgggccccgaccaggagcctgcgtacgagtctctcgtgcttcct
gataaccgcattgtggacttgaacaccaggtttagtgggatcagtgaagatgatatggag
gatgtgactactacaataagggatgtccaggctgtcctgctgtccctattctcggaccaa
accattctcatgggacacagtctggaatctgaccttatggcactcaagatgatccacaat
acagtggttgacacctctgtcgtatttcctcatcgcatgggccgaccgttcaaacgagcc
ctgagaaacctcatggtagaatacctcaagaaaatcatccaggatgatgttggtggtcac
gacagtttggaagatgctaacgcctgtcttcaactaatgcagtataagctgaaggacgat
gagcggaaagaagcgcggcgactctcatcttga
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integrated database retrieval system