Mya arenaria (softshell): 128214721
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Entry
128214721 CDS
T09995
Name
(RefSeq) structural maintenance of chromosomes protein 5-like
KO
K22803
structural maintenance of chromosomes protein 5
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maea03400
]
128214721
DNA repair and recombination proteins [BR:
maea03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
128214721
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_21
AAA_13
AAA_29
AAA_27
AAA_25
Motif
Other DBs
NCBI-GeneID:
128214721
NCBI-ProteinID:
XP_052777305
LinkDB
All DBs
Position
13:complement(19427411..19463811)
Genome browser
AA seq
1041 aa
AA seq
DB search
MSYTEGSIVNIKLENVLTYDDVEFTCGPHLNVIIGPNGTGKSTIVCAICLGLAGKLSLLG
RAQHPTDFIKHGKSRGRIELELHNNDGDNYRIKREISKEGPQNKWWVNGRQATQKSIEDL
VARLNIQVGNLTQFLPQEKVSDFAKMSEFELLENTEKAIGDPEMYELHMKLKDSRNNARE
LELQFNSLQERLNQEKAKNARIEQDVKSFEERQKFLEQIQNLKMKKAWVEYEERRQIYLT
DKENKQKAEKEVKRLRDANAPLQKKIADAVKRKDEVHVKIKAKTRELRNVAESAEKNGSE
VDNLTDKYVDVKDELKFKREQEESRKKRLRDLNKQLEALETDLRNLDDTENVQPKIEKVN
KSMREVTVPLGQINHQGDTLRMEVEKRRKNMAGINKELQSLRNIENQRLEGLRSKHRDTY
TAVMWLRENKARFKGIIHEPIMLCVNMRNPEMAKYLENHISFNDMRAFVCENSEDMNMFM
DVMREEQNLRVNAVVAPTHLPQDQQQPSQSIENLRRYGFECYLQDLFTCPDAVMRFLCRQ
YRVHNIPVGNARTKDLVANIIKEVQLACFYTSDNQYKITKSRYDQSTSSRNMKLKNASLL
TSSMDAERESYLLQQLQEETDQCRSGEEQYGVLQDRSRHLEQQLSKLRDEKKQLMSRKDQ
KKRLQSQIETKKQTISSVENETVDIDNEEKLAKKKIADINALKMKNLKQYIENTERCVEV
CKAKVCLGLRHAEAVREVRTMEAAVREQTQALQQAENKFTRVKEQLHNSKIVAKRLLEEA
KRTSGIRPDQELPEETRETFLSLPDTLEEIEARISEHQVRADLTLDIDRRIIAEFHRRKG
DIDRLEKEVTDKEQEKDSHQEKIEEAKARWLGPLQELIGRINKAFSHFFRKLQSVGEVEL
HIPDNPEEYSKYGIKIKVKFRDSEPLRELSAHHQSGGERSVTTVLYMMALQELAKVPFRC
VDEINQGMDPVNERKVFELVVQTVCKESSSQYFLLTPKLLPDLEYAPAMTVLCVYNGPHM
LKHTEWNLKRFIKRGRPLRDS
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacaccgaagggtcgattgtgaatattaaactagaaaatgttctgacatatgat
gatgtggagttcacatgtggaccccatttgaacgttatcattggtcccaatggtactgga
aagtcaaccattgtttgtgcaatctgtctgggcctggctggcaaactaagcctactggga
agggcacaacaccctacagacttcatcaagcatggaaagagcaggggcaggattgagctc
gaactgcacaacaatgatggggacaactatcgaatcaagcgagagatcagtaaagagggt
ccccaaaacaaatggtgggtgaatggaaggcaagctacacagaaatcaatagaggacctg
gtggctcgcctcaacatccaagtgggaaacctgacccagttcctgccacaagagaaagtg
tcggactttgccaaaatgtcagagtttgagcttctagaaaacacagaaaaggcaataggt
gatcctgaaatgtatgagctacacatgaagctgaaggactccagaaacaatgcaagggaa
ctcgagctgcagtttaacagtcttcaggagcgtttaaaccaagagaaagccaagaatgcc
cgtattgagcaggatgtgaaaagttttgaagaacggcagaaattcctggagcaaatacaa
aatctaaagatgaagaaggcgtgggtggagtatgaggagaggcgacagatctacttgaca
gacaaggagaataaacagaaggccgagaaagaggtaaagagactccgagatgctaacgcc
ccgctacaaaagaaaattgccgatgctgtcaagaggaaagatgaagtacatgtgaagata
aaagcaaagactcgagagctacggaatgttgcagaaagtgcagagaagaatggttctgaa
gtggacaaccttacagacaagtatgtggacgtgaaggatgaactcaagtttaagagagaa
caggaagaatccagaaagaaaagattgagggacctgaacaagcagctggaagcccttgag
acagacctgaggaacctagatgacacggaaaatgtacagccaaagattgagaaggtaaac
aagtcgatgcgagaggttactgttccgctgggacagatcaaccatcaaggggacacgctc
agaatggaggtcgagaagcgcagaaaaaacatggcaggcattaacaaggagcttcagtct
ctgcgtaacatagagaatcagaggttagagggactgcggtcgaaacatcgcgacacatac
actgccgtcatgtggcttcgggagaataaggctcggttcaagggaatcatacatgaaccc
atcatgctctgtgtgaacatgagaaacccagaaatggccaaatacctggagaaccacatc
tcgttcaacgacatgcgtgctttcgtgtgtgaaaacagcgaagatatgaacatgtttatg
gatgtgatgcgagaggaacaaaatttgcgtgttaacgctgtagtggcgcccacccatctc
ccgcaagaccaacagcaaccctcccaatctattgagaatttaaggaggtacggttttgag
tgctacctgcaggacctgttcacatgtccggacgctgttatgcggtttctgtgccggcag
taccgcgtacacaacatacctgttggcaacgcccgtacgaaggaccttgtggcaaacatt
attaaagaagtccagttggcatgcttctataccagtgacaatcagtacaagataaccaag
tccagatatgaccagtccacatcatccagaaacatgaaactcaagaatgcctcattgctg
acttcgtccatggatgcagagagggagtcatatcttcttcagcaactacaggaggagact
gaccagtgtcgttctggggaggagcagtatggcgtgctgcaggaccgttcccgacacctg
gaacagcagctatcaaagctgagggatgaaaagaaacaactgatgagcaggaaggatcag
aagaagaggctgcagtcacagatagagaccaagaaacaaactatcagtagtgttgaaaat
gaaactgtggatattgacaacgaagaaaaacttgccaagaaaaaaatagcagatataaat
gctctgaagatgaaaaacctgaaacaatacatcgaaaacacagagcgttgtgtggaggtg
tgtaaggcgaaggtgtgtctgggattgcgtcatgcggaggccgtgcgagaggtgaggaca
atggaggccgcagttcgggaacaaacacaggctctccaacaggctgagaacaagtttaca
cgtgtgaaagagcagttgcacaactcaaagattgtagccaagcgtctactcgaggaagca
aagcggacgagcggtatacgaccagatcaggagctgccagaggaaaccagggagacattc
ctgagcctacctgacactttggaagagatagaggcacggattagtgaacaccaagtccgg
gccgacctcacattggacatcgacagaaggattatcgcagagtttcatcgccggaaaggg
gacattgacaggcttgaaaaagaggtgactgataaagaacaggagaaggattcccaccag
gaaaagattgaggaggcaaaggctcgttggttaggtccactgcaggagttgataggtcgc
atcaacaaggcattcagccacttcttccgtaagctgcaatctgtaggcgaggtggagctg
catattccagacaaccctgaggagtatagcaagtatggtattaagatcaaggtgaagttc
cgtgactcagagccccttcgtgagttatccgcccaccatcagagtggtggggagcggagt
gtgaccaccgtcctctatatgatggccctgcaggagcttgccaaggtccccttccgatgt
gtcgacgaaatcaatcagggtatggacccagtaaatgagcgtaaagtgtttgagctggtg
gtacagaccgtgtgtaaggaatcctcctctcagtacttcctcctcacgcccaagttgttg
cctgacctggagtatgcccctgccatgaccgttctgtgtgtgtataatggaccgcatatg
ctgaaacataccgagtggaaccttaaacgcttcattaagaggggccgtccactcagagac
agctag
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