KEGG   Mya arenaria (softshell): 128214954
Entry
128214954         CDS       T09995                                 
Name
(RefSeq) TATA box-binding protein-like 1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
maea  Mya arenaria (softshell)
Pathway
maea03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:maea00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    128214954
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:maea03000]
    128214954
   03021 Transcription machinery [BR:maea03021]
    128214954
Transcription factors [BR:maea03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    128214954
Transcription machinery [BR:maea03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     128214954
  RNA polymerase III system
    TFIIIB
     128214954
  RNA polymerase I system
    SL1/TIF-1B
     128214954
SSDB
Motif
Pfam: TBP Spectrin DUF3874
Other DBs
NCBI-GeneID: 128214954
NCBI-ProteinID: XP_052777637
LinkDB
Position
13:21510762..21519145
AA seq 267 aa
MAEGVILQSAHHHQPVASQMMPLQEPAVAEAPVEVEVNLDISISNVVCSFGTKCHLNLKK
IAMEGSNVEYHRQHGMLNMRIRRPRTTASVWSSGKITCTGAMSEEDAKIAARRFARKIQK
MGYKVKFTNFRVVNVLGTCSLPFCLNIDKFSREHKEASYEPELHPGVTYKIKDPKATLKI
FSTGSITVTAPRVSNVQSAIEYIYPLVVDFNAGPRPEKLINPEQLLNKHKRLANRVHVSQ
DEIDQYEDSEFDSELEESDFDSEESQD
NT seq 804 nt   +upstreamnt  +downstreamnt
atggcggaaggagttatactgcaatctgcacaccatcatcagccagtagcctcacagatg
atgccactgcaggaaccagcagttgcggaggccccagttgaggtggaggttaacctggac
atcagcatcagtaacgttgtgtgcagctttggaaccaagtgccaccttaacctgaagaag
atcgcgatggaagggtccaatgtagaataccacaggcagcatggtatgctgaacatgaga
atccgtcgtcccaggacaacagcgagcgtgtggtcctcagggaaaattacctgtacagga
gccatgagtgaagaagatgcaaagatagcagcacgcaggtttgcccgaaagatacagaag
atgggctacaaagtcaagtttaccaacttccgtgtagtgaatgtgctgggcacatgttca
cttccattctgtctcaacattgacaagttctccagggaacacaaggaagccagttatgaa
ccggagcttcaccctggggtaacatacaaaataaaggatcccaaggccacattgaagata
ttttctactggtagtattactgtcacagctcctagagtgtcgaacgtccagtcagctata
gagtacatttatccgctagtggtagactttaacgctgggccaagacctgagaaacttata
aaccctgaacaacttctgaacaagcacaagagactggcaaaccgtgttcatgtgtcacaa
gatgaaatagaccaatatgaagattcagagtttgactcagagttggaagaaagtgacttt
gatagtgaggagagccaagactga

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