Mya arenaria (softshell): 128214954
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Entry
128214954 CDS
T09995
Name
(RefSeq) TATA box-binding protein-like 1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
maea
Mya arenaria (softshell)
Pathway
maea03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128214954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
maea03000
]
128214954
03021 Transcription machinery [BR:
maea03021
]
128214954
Transcription factors [BR:
maea03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
128214954
Transcription machinery [BR:
maea03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128214954
RNA polymerase III system
TFIIIB
128214954
RNA polymerase I system
SL1/TIF-1B
128214954
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Spectrin
DUF3874
Motif
Other DBs
NCBI-GeneID:
128214954
NCBI-ProteinID:
XP_052777637
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All DBs
Position
13:21510762..21519145
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AA seq
267 aa
AA seq
DB search
MAEGVILQSAHHHQPVASQMMPLQEPAVAEAPVEVEVNLDISISNVVCSFGTKCHLNLKK
IAMEGSNVEYHRQHGMLNMRIRRPRTTASVWSSGKITCTGAMSEEDAKIAARRFARKIQK
MGYKVKFTNFRVVNVLGTCSLPFCLNIDKFSREHKEASYEPELHPGVTYKIKDPKATLKI
FSTGSITVTAPRVSNVQSAIEYIYPLVVDFNAGPRPEKLINPEQLLNKHKRLANRVHVSQ
DEIDQYEDSEFDSELEESDFDSEESQD
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggagttatactgcaatctgcacaccatcatcagccagtagcctcacagatg
atgccactgcaggaaccagcagttgcggaggccccagttgaggtggaggttaacctggac
atcagcatcagtaacgttgtgtgcagctttggaaccaagtgccaccttaacctgaagaag
atcgcgatggaagggtccaatgtagaataccacaggcagcatggtatgctgaacatgaga
atccgtcgtcccaggacaacagcgagcgtgtggtcctcagggaaaattacctgtacagga
gccatgagtgaagaagatgcaaagatagcagcacgcaggtttgcccgaaagatacagaag
atgggctacaaagtcaagtttaccaacttccgtgtagtgaatgtgctgggcacatgttca
cttccattctgtctcaacattgacaagttctccagggaacacaaggaagccagttatgaa
ccggagcttcaccctggggtaacatacaaaataaaggatcccaaggccacattgaagata
ttttctactggtagtattactgtcacagctcctagagtgtcgaacgtccagtcagctata
gagtacatttatccgctagtggtagactttaacgctgggccaagacctgagaaacttata
aaccctgaacaacttctgaacaagcacaagagactggcaaaccgtgttcatgtgtcacaa
gatgaaatagaccaatatgaagattcagagtttgactcagagttggaagaaagtgacttt
gatagtgaggagagccaagactga
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integrated database retrieval system