Mya arenaria (softshell): 128215012
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Entry
128215012 CDS
T09995
Name
(RefSeq) toll-like receptor 4
KO
K18808
toll-like receptor 13
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
maea04054
]
128215012
Pattern recognition receptors [BR:
maea04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
128215012
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR_2
TIR
LRR_14
LRR_Zer-1
LRR_9
LRR_LRWD1
LRRNT
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
128215012
NCBI-ProteinID:
XP_052777704
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Position
13:complement(66682770..66687042)
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AA seq
911 aa
AA seq
DB search
MSDSFFITLICSLLAIGQCQYMDSPNMSCGIPKNSRKSRCGTNNACWCFYSSILAVDCSG
SNLDKVPQGLPAKIAIFILRNNSINTTENISYDHFTILTCLDLSSNKIGTIQDGSFNNSL
YLRTLLLSENNITYFGKGVLSTHNKLETLDVRRNSRKSKTSYPCKIQQETQKATNLQGLL
IDGSPCTANLSFSHLTSLILGGDETLCNINTIRSSMFTQLPSLRKLQLRNCQIRRVENGS
FSNLKNLRFLDLSSNPYLTFSAMPNFTFGLIPTNISFLNISNLHTTFGNCTILTASDLEY
LSKTNIEHLYLDSNRISNMEIEAVRFIPRHLKTLSLVDNKLALGHYVVQIFVNIVTKELF
SDLETIWFSHRHKNHQFRFFYLVNDVFQRKLSHNANITKRAMLYSDPKRSSRTRFLRSIT
DNNARKLNNESFKDDLLDDFTSSIDFHIRNGLCDNCRNVSNSIEKIPLPAAVRHVDAKDL
KVRTTIRSYCFCQPNNIQIVNLSTNVLHTWNGPILGLDKLKELHLDDNSCSEIALNAFHN
MANLEILNIAQNYLGYVFTNDNEGILLSRLEKLKYLDLSSNKIKQLPTGVFIGLVGLEQL
LLRDNNLKSVSFEANHMQHLKFIDLTLNMIKTISPDTLTLFTKVIVANNFSIALKNNSFS
CTCKYVYLVKWFSETRVTAFQELNQYKCTFDNGSKGYLSNAHQIYKTLNKQCANYLPLIV
STSISLFIILVIITCSFVYRFRWDLRYIYYSAKYRFKGYASVNHESGDYEFDAFVSYAEK
DAVFVHQRLAPELESNRGLRLLVHDRDFLAGNMVNENIIHAITSSRKTLIIMSPNFLASS
WCVYEMNMARMETIKTGRDVLCVVLKENVQTNGLPLEILDVFRERTYLELPVEGGDLEDQ
FWDRLADAVCQ
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactcatttttcataacattgatctgctcgttattggctattggtcaatgtcag
tacatggattcgccaaatatgtcatgtggaattcctaaaaattccagaaaatcaagatgc
ggaacgaataacgcatgctggtgtttctattcatctatactggctgtagattgttctggc
tcaaatcttgataaagttccgcaaggattaccagcaaagattgccatattcattttgcgg
aacaattcaataaataccactgaaaacatctcgtacgatcatttcacaattctaacttgc
ttggatttgtcatcgaacaagattgggacaatacaggatggttcctttaacaacagtcta
tatctacgaacactccttttaagtgaaaacaatatcacgtattttggcaaaggcgtgctt
tcaacccacaataagttagaaacactggatgttagaaggaattcaaggaaatctaaaacg
agttatccatgtaaaatccaacaagagacacaaaaggctacaaatcttcaagggttgtta
atagatggatctccatgtacagcgaacctcagcttttcacaccttacatcgcttattcta
ggaggagacgaaacattgtgtaatataaacactattcgatcaagtatgttcactcagcta
ccaagtctccgcaaactgcagctacgcaattgtcaaatccgaagggtcgagaatggtagt
ttctctaatctgaaaaatttacgctttcttgatttgtcctcaaacccttatcttacgttt
tcagcgatgccaaatttcacatttggattgattcccaccaacataagttttctgaatatc
tcaaacttgcacacaacctttggtaactgcaccatattaacggcatcagatcttgaatac
ctctcaaaaacaaacatcgaacatttgtatctcgattccaatcgaatcagcaacatggaa
atagaggcagttcggtttattccaaggcatttgaagacgttatcactggttgacaacaaa
ttagctctaggacattacgtggttcagattttcgtcaatattgtaactaaagaactattt
tctgatttggaaacaatttggttttcgcaccgacacaaaaaccatcagtttagatttttt
tatttagtgaacgacgtgttccaacgtaagctgtcccacaatgcaaacatcacaaaaagg
gcgatgttatattcggacccaaagcgatcttcaagaacacgatttttgcgctcgattacg
gataacaatgctagaaaactgaacaatgaatcctttaaagacgacctattggacgatttt
acttcatctattgatttccacatcaggaatggtctatgcgataattgtcgaaatgtttca
aattcaatcgaaaagatacctcttccggcggccgtgcgacatgtggatgcaaaagatctt
aaagtacgtacaacaatacgcagctattgtttttgtcagccaaataatatccagatcgta
aatctttctaccaacgttttacatacttggaacggaccaatattaggtctagataaactg
aaagaattgcatttggacgacaactcttgttctgaaattgccctaaatgcatttcacaac
atggccaatctagaaattctgaatattgctcagaattatttaggttatgtttttacaaat
gacaatgagggtatcttattaagtagactcgaaaaattaaagtacttggatctttcttca
aacaagatcaaacaacttccaacgggagtgtttattggacttgtgggccttgaacagttg
cttttgcgagacaacaatctcaaaagcgtctcatttgaggccaaccatatgcaacatctt
aaatttattgaccttactttgaatatgatcaaaacaataagtcctgacaccctaacgctt
tttaccaaagtgattgtcgctaacaatttttctattgcattgaaaaacaacagcttctct
tgtacttgcaaatatgtttatttggtaaaatggttctctgagaccagggtcacagctttt
caggaactgaaccagtacaaatgcacattcgataatggatcgaaaggatatctttctaat
gcacaccagatatacaaaacactgaacaaacaatgtgccaattatttgcccttgattgtt
tccacgagtatttcgctcttcatcatactcgtcatcattacatgcagcttcgtttacaga
tttagatgggacttacggtacatatactattcggcaaaataccgtttcaagggctatgct
tcagtcaaccatgaatccggcgactacgagtttgatgcatttgtgtcctatgccgagaaa
gatgccgtctttgtccaccaaaggcttgctcccgagttagaatcaaaccgaggcttacgt
ctgttggtccacgacagagattttttggccggaaatatggtaaatgaaaatattatccac
gcaataaccagtagccgaaaaacgctcatcatcatgtcaccaaacttcctggccagcagt
tggtgcgtgtacgaaatgaacatggctcgcatggaaaccattaaaaccggaagggacgtt
ttgtgcgtggtactcaaagagaatgtgcaaacgaatggccttcccttggaaattttggac
gtgttccgcgaaaggacctacttggaactaccggtcgaaggaggtgacttggaggatcaa
ttttgggacaggctagcagacgctgtttgtcaatag
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