Mya arenaria (softshell): 128215018
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Entry
128215018 CDS
T09995
Name
(RefSeq) fizzy-related protein homolog
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
maea
Mya arenaria (softshell)
Pathway
maea04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128215018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
maea04121
]
128215018
Ubiquitin system [BR:
maea04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
128215018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
eIF2A
Beta-prop_HPS5
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_RIG_1st
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_Vps41
Tricorn_2nd
Beta-prop_SCAP
Ge1_WD40
ELYS-bb
Beta-prop_VPS8
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_IFT80_2nd
WD40_RFWD3
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
128215018
NCBI-ProteinID:
XP_052777711
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All DBs
Position
13:11719586..11727918
Genome browser
AA seq
488 aa
AA seq
DB search
MDPEYEKRLLRQQNGGSPYSSPYSSPLSLSPGSPMSSPSKEKYGDRFIPARSGAAWHINF
NLNSESPRQSPVASRKAREVANDQAKDGLAYNCLLKNELLSAGIEDLKDQQPDERRILVP
KESKNLFRYHVPRRSSDAESSPYSLSPVGSKSQKLLRSPRKAVRKISKIPFKVLDAPELQ
DDFYLNLVDWSSQNVLSVGLHTCVYLWSACTSQVTRLCDLSGDGDKVTSVSWAERGNLVA
VGTHKGYVQIWDVAASKKINTLEGHSARVGALAWNGDMLSSGSRDRLILQRDIRTPSVAP
ERRLTGHRQEVCGLKWSPDHQHLASGGNDNKLFVWNMTSVSPVQTYTDHLAAVKAIAWSP
HQHGLLASGGGTADRCIRFWNTLTGQPLQSVDTGSQVCNLAWSKHSNELVSTHGYSQNQI
LVWKYPSLVQIAKLTGHSFRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKTRSNKESKSV
LNLFTRIR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggatcctgaatatgaaaaacgtctacttagacaacaaaatgggggatctccatactcg
tcaccatattcttcgccactgtctctcagcccaggaagtcctatgtcatcaccgagtaaa
gagaaatatggggacagattcataccagcaagatctggagctgcctggcacatcaacttc
aatcttaattcggaaagtccaagacagtctccagttgccagtaggaaagctcgagaagtt
gccaatgaccaagctaaggacggcttggcctacaattgccttctgaagaatgagctcctg
tcagctggtattgaggatctaaaggatcagcaaccagatgaaagaagaattttagttcca
aaagagagcaagaacttgttcaggtaccatgtgccacgtaggagctccgacgctgaatca
tctccatactccctttcacctgttggcagcaaaagtcagaaactactgcgctctccaagg
aaggcggtgagaaagatctccaagataccgttcaaggtcctagatgcccccgagctacag
gacgatttttacctgaacctagtggactggtcctcccagaatgtgcttagtgtcggcctc
catacgtgtgtttacctgtggagtgcttgtaccagccaggtgacgagactatgtgacctg
tcaggagatggagataaagtgacctctgtgtcttgggctgagaggggtaacctggtggca
gttggcacacacaagggctacgtccagatctgggatgtggctgcctccaagaaaattaac
acactggagggacacagtgctagagtcggagcattagcttggaatggggacatgctgtca
tcaggcagtcgagacagattgattcttcagcgagacattcgcaccccgtctgttgctcct
gagcgtcgtttgacagggcatagacaggaagtgtgcggcctcaaatggtccccggaccac
caacatttagcctctggtggcaatgacaataaactgtttgtgtggaatatgacaagtgtt
tcccctgtacagacatacacagaccacctggcagccgtgaaggcgatagcctggtcccca
caccagcatgggttgctggccagtggagggggcactgctgaccggtgtatacgattctgg
aatacgctcactggacagcccctccagagcgtggatacagggtcccaagtgtgcaatctg
gcttggtccaaacactcaaatgaactggtgagcacacatggctactcccagaaccaaatc
ctagtgtggaaatacccctcccttgtccagattgctaagctcacaggccactcattcaga
gtattataccttgcaatgtcacctgatggtgaagccatagtcactggtgctggggatgag
actctccgattctggaatgtattcagtaaaaccagatccaacaaggaatccaagtcagtg
ttgaatctcttcactcgcatccgatag
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