Mya arenaria (softshell): 128216240
Help
Entry
128216240 CDS
T09995
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
maea03000
]
128216240
04121 Ubiquitin system [BR:
maea04121
]
128216240
Transcription factors [BR:
maea03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
128216240
Ubiquitin system [BR:
maea04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
128216240
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
ZBED1_RNase-like_helical
DBD_Tnp_Hermes
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
128216240
NCBI-ProteinID:
XP_052778769
LinkDB
All DBs
Position
14:complement(52557895..52559711)
Genome browser
AA seq
521 aa
AA seq
DB search
MPPKVTSSVWKYFTKIEDGKSVVCNLCSVKLVYCGGTSNLRNHIKKHPVCSPPSTPSKTP
LKRTTLDVTVSTPPRMQAAMTVRVTLAVTDWVVRDCHSLSVVDGQGFRDMMALAAPSYTV
PTRPTVRARVEKRYADERSNLISRFEKATSVSLTTDTWTSNSTESFITVECCVHDNARNI
QKAGTLCPEWGDHSCFAHTLQLCIKPVLELPSVSKVLGKCRKLVGHFKHSTTLALIQDVP
TRWNSTQLMCSRLDKLRRVVTDIMLNDDVTKKADRDLLLRDGEWGIVADISTVIGPFTHV
TTFMSKDKDVSIGEMFPIVYSLVGTVVQPCNNDTALVASMKTTLRDEMTERFQPGRDETA
ESLPMIASLLDPRYKKLSFLPRQLRRRTHTMLEGRLDDVPLKVSSRDDGDCATPAKRPRL
EFMVTSPESSMEDDLQLYLAEKMDDAIPALELWRRNENRFPKVAHVARSVLAVPATSVPS
ERVFSSAGLVLNKLRNRLNSDIVDAILFLNKNMRSVKCDTE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgaaagtgacttctagtgtttggaagtatttcactaaaattgaggatggtaaa
agtgttgtgtgtaacttgtgtagtgtgaaacttgtgtattgtggtgggacttcaaatcta
aggaatcacataaagaagcatcctgtgtgcagtccgccatcaactccgtcaaagaccccc
ctgaagcggacgacacttgacgtcaccgtttccacccctccgaggatgcaggctgccatg
acggtgagggttaccctagcggtgacggactgggtcgtacgtgactgccattcactcagc
gtcgtcgacggccaggggttccgtgatatgatggccttggcggcaccgtcttatacagta
cctacccggccgacagttcgtgcgagggttgagaagaggtacgcagacgaacgctccaac
ctcatctcccggttcgagaaggcgacgtctgtctccctcacgacagacacgtggacgtcc
aactctaccgagagttttatcaccgtggaatgctgcgtccatgacaacgcccgcaacata
cagaaggccggcacactctgtccagagtggggagaccactcctgcttcgcccacaccctc
cagctctgcataaagcctgtcctcgaacttccttctgtctccaaggtcctgggcaaatgt
cgaaagctggtagggcatttcaagcactcaacgacactggccctcatccaggacgtcccc
acgaggtggaattccacgcagctgatgtgtagccgcctcgacaagctacgccgggtggtc
actgacatcatgcttaacgatgacgtcacgaagaaggccgaccgcgatctccttctgaga
gacggcgagtggggcatcgttgccgacatatccacagtcattgggccgttcacccacgtg
accaccttcatgagtaaggacaaggacgtatccatcggggagatgtttcccatcgtgtat
agtttggttgggacagtggttcagccctgcaacaatgacacagcgctggtcgcctcgatg
aagaccactctccgggatgagatgacggagaggttccagccaggccgagatgaaactgcc
gagtccctcccgatgatcgcctcacttctggaccctcgatataagaagttaagcttcctg
cccaggcagctacgacgaaggacacacactatgctggagggccgccttgacgatgtcccg
ctcaaggtcagctcgcgcgatgacggtgactgtgccacacctgctaagcgaccacggctt
gagttcatggtcacatccccggagtcatcgatggaggacgatcttcagctgtaccttgcc
gagaagatggatgatgcaataccagccctcgagttgtggcggcgcaacgagaaccgtttt
ccgaaggtcgcgcacgtggcccgtagcgtcctcgcggttcccgctacatctgtgccatcg
gagcgcgtattttcgtccgccgggcttgttctgaacaagttgcgcaacagacttaacagt
gacattgttgatgccatcttgttcctaaacaagaacatgcgttctgtgaagtgtgacact
gagtga
DBGET
integrated database retrieval system
