Mya arenaria (softshell): 128216596
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Entry
128216596 CDS
T09995
Name
(RefSeq) toll-like receptor 4
KO
K05401
toll-like receptor 3
Organism
maea
Mya arenaria (softshell)
Pathway
maea04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128216596
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
maea04054
]
128216596
04090 CD molecules [BR:
maea04090
]
128216596
Pattern recognition receptors [BR:
maea04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
128216596
CD molecules [BR:
maea04090
]
Proteins
128216596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_6
LRR_5
TIR
TIR_2
RE_MamI
RIFIN
Motif
Other DBs
NCBI-GeneID:
128216596
NCBI-ProteinID:
XP_052779170
LinkDB
All DBs
Position
14:complement(1185942..1190031)
Genome browser
AA seq
968 aa
AA seq
DB search
MVRKNSLYRSFAMWIASLLLVILLSVEFVYCDFPCNGCACVSKNTSCACEKHPTENGIIV
DCSFTNVTYVPTQIPANITLVLNMSSTRLEDLVTYTSTPFENYALLRVLDLFNTTLGTKN
ATIQNTTFTGLDKLRYLNISNNDQMALTYNTSENLFGNLNSLKELRMYATTGTYNRGKGY
PEMAIWKLRYSLEELWLDGMTDISFGPVFQEMSKLNTVRISGDMVLPPWRYLEFCETNIT
NKSFENLIYVTHLSVLKCGVKDIAADAFVNMTHLVYLDLSENFELGMDGLTKAASSLNKK
METIIMNHVVNGQFLSCGTTITSKIVTPFEHLTNLKYLSLQYNAVNNVEKEVFKLLPSVE
EINISRNEFELGFYIFYVYFMKNLKKLDVSFNFFNDDIGIWSSLSPKKHVRTNGLLHNAR
MTTTEAHASSRNNLTYLTSTAAEHETFADMQVHMNNYRHHVPVPNTCPTPEYFIPRCSVT
GFLPPKMEEIDISYSKIGYPIFELCFDPNNKLKTISAACSLLFCWEGPTHGLEKVENIDL
SLNFATQVNVHFFDGFPNLKRLNLHGNLLFNPIQKNGSRLFANNTHLKDLDISFNRIESV
QPDLLQHQKDLEVFNMSFNIFTSFGLNISHLKHLRMLDMSNNHIWTLPQSVRNALKSISM
TSSRGRNRMQVNMTNNHIKCTCANLDFLKWVLEHMGSCSYLYVNITECNFFHNDNMTKEV
INSKNDLEEKIIYLDKQCKSYLDVIIVSAILLVIVIVIVVGVLVHRFRWKISYWYYVTSR
KIVKRAGYTSIDSIAEEANKFRYHVYVASNAEANTFVSETLEPHLTRDGYKLFLPDYIVP
GQNKYSLIANAIHISRAALFVITKGCESEDEWKIALHMAQEESLRRGKPIFFGLFLQSTP
DSGWSKDTLEIKRRCYLDFPERGESQEMIAFWRELIDIIEKIDDTPIAVNQSLFNRNTSS
NNRYTCIN
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaaaaactcgctttacagatcattcgcgatgtggattgcaagccttctacta
gtgatcttactgtcagtggaattcgtttactgtgatttcccatgcaatggctgtgcatgt
gtcagcaagaacacatcctgcgcctgcgagaaacacccaactgaaaatggtattatcgtg
gactgctcattcaccaacgtaacatatgtgccgacgcagataccagctaatattaccctg
gtcctaaatatgtcatccacaagactcgaagacttggtgacttatacaagcacgccattt
gaaaactatgcgttactcagagtattagatctgttcaacacaacattgggaacaaagaac
gctacaattcaaaacacaactttcacaggactagacaagctacggtatttaaatatatca
aacaacgaccagatggcattgacctataacacaagcgagaacttgtttggaaatttaaat
tcactcaaagaattgagaatgtacgcaacaacgggaacgtacaatcgtggaaagggttac
cctgagatggccatatggaagcttcgatacagtttggaagaactctggcttgatggtatg
acagatatttcatttggtcctgtgtttcaagagatgtcaaagcttaatacggtgcgaata
tcgggcgatatggttctaccgccgtggcgatacttggagttttgtgaaacaaacataacg
aataagtcatttgaaaatttgatttacgtgacacacttgtcggttttaaaatgtggcgta
aaagatattgcagcagacgcttttgtaaacatgacgcatttggtttatctagatttgtct
gaaaattttgaattaggaatggatggtctgacaaaggcggcgagcagtttgaacaaaaaa
atggagacaataatcatgaaccacgttgtaaatggtcagtttctgagctgtggcaccacc
attacctcaaaaatcgtaactccatttgaacatctaacaaatttgaaatacctttcactg
caatataatgcagtgaacaacgttgaaaaggaagtgttcaaacttttgccgtcagttgag
gaaattaatatttcaagaaatgagtttgaacttggattttacattttttacgtttacttc
atgaaaaatttaaagaagctcgacgtatcttttaactttttcaatgatgatataggaata
tggagttcgttaagtccgaagaagcatgttcgcaccaatggcctgctccacaatgcgcgc
atgacaacgacggaagcacatgcgtcctcacgcaacaatttgacatacctaacgtctact
gcagctgaacatgaaacctttgcagacatgcaggtgcatatgaataattacagacatcac
gttccagtaccgaacacctgcccgactccagaatatttcattcctagatgttcggtcact
ggttttctcccaccgaaaatggaggaaatagatataagttacagtaaaattggataccct
atttttgaattatgttttgacccaaataataagttgaaaactatatccgcggcgtgctcg
ttgctgttttgttgggagggaccaacccatggtttggaaaaagttgaaaatattgacctt
agccttaattttgcaacgcaagtgaatgtacatttctttgatggttttccgaatcttaaa
agattgaatcttcatggcaacctcttgttcaatccgattcagaagaatggttcgcgctta
tttgcaaacaacacacatttgaaggacttggacatatcattcaatagaattgaaagtgtg
caacctgacctactccaacaccaaaaagacctggaagttttcaatatgtccttcaatata
tttacatcttttggtctgaatatctcgcacttgaaacacttgcgaatgctcgacatgagc
aacaaccacatatggactctcccacagagtgtaagaaacgcactgaagagtatttcaatg
acaagctctaggggcaggaatcggatgcaagtgaacatgacaaacaaccacatcaaatgc
acatgtgctaatcttgattttttaaaatgggttttagagcatatgggttcatgtagctat
ctgtacgtgaatattactgagtgcaacttttttcacaacgacaacatgacgaaagaagta
ataaattctaagaatgatctggaagagaaaattatatatcttgataagcaatgtaaatca
taccttgatgtcataatagtcagcgcaatacttttggttattgtaattgtaatagttgtc
ggcgtgttagttcataggttcagatggaaaataagctactggtactatgtgacttctcga
aaaatagtcaaacgagctggctatacgtccattgacagcattgctgaagaggcgaacaag
ttccgataccatgtgtacgtggcatccaatgcagaggccaacacttttgtaagcgagacc
ctagagccccatctcacaagagatggctataaattgttcctccccgactatattgtgccg
gggcaaaacaagtacagtttaattgcgaatgctatacatataagcagagcggcgctgttt
gttataaccaaagggtgcgaatctgaagacgaatggaagattgccctacatatggcacag
gaagagtctttgagacggggaaaaccaatattctttggacttttcttgcagtccacgccg
gattctggctggtcaaaggacacgttggaaatcaaaaggaggtgctatctggactttccg
gaaaggggcgaaagtcaggaaatgattgccttttggagagaactgattgacattattgaa
aaaatagacgacacaccgattgctgtaaaccaaagtttattcaacagaaacacttcttcc
aacaatagatatacatgcattaattag
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