Mya arenaria (softshell): 128217151
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Entry
128217151 CDS
T09995
Name
(RefSeq) zinc finger protein DPF3-like isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
maea
Mya arenaria (softshell)
Pathway
maea03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128217151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
maea03041
]
128217151
03036 Chromosome and associated proteins [BR:
maea03036
]
128217151
Spliceosome [BR:
maea03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
128217151
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128217151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
PHD_4
C1_1
PHD_2
zf_RING_Vps8
TNP-like_RNaseH_C
zf-PHD-like
Motif
Other DBs
NCBI-GeneID:
128217151
NCBI-ProteinID:
XP_052780038
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Position
14:21774313..21804255
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AA seq
418 aa
AA seq
DB search
MTEIVLRHSAVQKSIGGSEAFYNEAIEQAANFNLRMKNDRKMRLPFLDSQTGVAQSHTDL
WHSYRHRRPGKYPGQIYSYPERRWKKKRHYFLFPEERNNKTGDIETGEAVTESVIGASKR
RPRSADVSTPDMHQISTVENPAATSKADEEIPDLKSETSKDKWYDEYDEYMEPPDAGEMC
DDQSDISDFEDTYIKKKKRKGKGSTRGRKKKIDKEEKEKLDEEKEKPYACEVCNARYKTR
PGLSYHYNHFHNGMMEPEEPEPSPKSVAKTPPKLEREEPVKVTPTLVFPERGEDGKVQNS
NYCDFCLGDSDENKKTGESEQLVSCSDCGRSGHPTCLQFTANMTVSVKKYPWQCIECKSC
GLCGTSENDEQLLFCDDCDRGYHMYCLNPPLAEAPEGNWSCHLCIEEFHGGKKPAGMA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaattgttttgaggcatagcgctgttcagaagagcattggcggctctgaggca
ttttacaatgaggcaatagagcaggcagccaacttcaacctgcgtatgaagaatgacagg
aagatgcggctgcctttcttggactctcaaactggagtggcccaaagtcacactgatctg
tggcattcttaccgtcacagaagaccagggaagtaccctggccagatctactcctatcct
gagcggagatggaagaagaaacgccattatttcctatttcccgaagaacgaaacaacaaa
acaggagacattgagacgggtgaagcagttacagaatcagtgattggcgcgagtaaacgc
cgacccaggtcggctgatgtctcaaccccagacatgcatcaaataagcactgtggagaat
ccagctgccacgagtaaagccgatgaagagatccctgatcttaaaagtgagacgagcaag
gacaaatggtacgacgaatacgatgagtatatggagccgccagacgccggggaaatgtgc
gatgaccagtctgatatctcggactttgaggatacctacattaagaagaagaaacgaaag
ggaaagggaagtactcgtgggaggaagaagaagatagacaaagaagaaaaagaaaaactt
gatgaggaaaaggaaaaaccttatgcttgtgaagtatgtaacgcacgctacaagacccgt
ccggggttgtcgtaccactacaaccatttccacaatggtatgatggaaccagaagaacca
gaaccatctcccaagtccgttgctaaaactcctccaaaattggagcgtgaagagccagtg
aaggtcacacctacgctagtattcccagagcgtggtgaagatggtaaagtgcagaacagc
aactattgtgacttctgtctcggagactccgatgaaaacaagaagactggggagtctgag
cagctggtttcctgcagcgattgcggaagatctggtcacccaacttgcctgcagttcacg
gcaaacatgactgtttccgtgaagaaatacccatggcagtgtattgagtgtaaatcctgc
ggactgtgcggaacttctgagaatgatgagcagctactgttttgcgatgattgtgaccgt
ggttaccacatgtactgcctcaacccgcccctggctgaggccccagaagggaactggagc
tgtcatctgtgtattgaagaatttcatggtggaaagaagccagctggaatggcttaa
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