Mya arenaria (softshell): 128217187
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Entry
128217187 CDS
T09995
Name
(RefSeq) laminin subunit beta-1-like
KO
K06243
laminin, beta 2
Organism
maea
Mya arenaria (softshell)
Pathway
maea04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128217187
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
128217187
NCBI-ProteinID:
XP_052780094
LinkDB
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Position
14:35946786..35993645
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AA seq
1766 aa
AA seq
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MEVLHIGLLLIVFTVFQVASGQEYDYRLQPQCEQGSCYPATGDLLIGRESNLTANSTCGI
DRPERYCIVSHLDDEKKCFLCDSRNVWSQSAPNSHRIENIVSSFRERKFKWWQAENGVQH
VYIQLDLEAEFHFTHLIMTFKTFRPKALYVERSFDFGNSWKIYRYFAYDCAKSFPGVATG
PFRNLTDVICVSKYSDVVPSSEGELVFRVLPPFFRISDPYSKDVQDLLKLTNLRVVFTEL
HTLGDTVFDGRQDIREKYYYSMYDMTVRGSCSCYGHASRCVPVDGYNNENNLNMVNGMCE
CTHNTKGLNCELCQDFYNDKPWRPAQHSDTNACQRCECYNHATACHFDAGVYELTGRVSG
GVCDDCQHNTMGRNCQECRAGYFQDPNKELYDPNICQQCDCDPTGSLYDGECERMTDEEL
GLEAGRCNCKTYVTGRRCDSCIDGYWNLLDDNPNGCEACTCDPMGTLENFGCDQYTGYCT
CKRYVTGKNCDQCYPGFWGMSNDLNGCRPCDCDVGGATSDACDVETGQCTCKDNIQGRQC
HQVQPGYFFTRMDWYTYEAEFAEGFGNTRVYIRELIPDYRSWTGPGYMRVIEGDAILFSD
ISVDFPMYYDIVIRYDQRMTEKWDDVRVRVIRPDIVDRDGPCANAIPQDDDKAVMLQQSS
RFVTVEPSVCLESGQNYSIRIEFSRYKSDRQTPDATVLIDSIILVPNTESIPIFLGPGLP
DYMKNEYLRYRCRELQLHVHQPELPDLCKKHVFSISGIIHHRALDCDCDLTGSLSFECDP
VGGQCQCKEHVVGRRCDQCAPGTYGFGPNGCTPCNCHAIGARDNFCDIETGQCLCIPNVH
KRICEECEPGYYGFPYCRACDCNGNAETCDNLTGECISCTDNTTGAHCERCLAGFYGDPR
LDVREPCRACMCPGGPYSNAQHADTCYYDPRLEYVVCECDIGYKGPDCGVCDENYFGNPQ
EDNGTCGMCECSGNIDPDDIGNCDHETGECLKCLFNTEGFNCEKCEAGYYGDALTQNCIE
CVCNPIGTNKSAGDCDRVSGQCPCLPNVVGQKCDMSAPGFWNMTEKIGAITCACDPDGSF
GFECNEFTGQCDCLMGRGGRTCSECEDLFWGEPTEECYPCECDVQGSAQAQCDRKTGQCV
CKVGISGYKCDRCDRGTTGELPNCVPCGDCFDNWDRVVRDLRDQTSSLVSQAENIAIEGA
AGAFDKEFRVMEDNLAEIRRIVEGAGVSSYDVEELQMMIKTMRENLTANIEDLDTMDENL
QTTMGRIQEGNSRISALQLGVEELNKKAELLRKNASDIQAQDVEGAINITREAEQRSLQA
QSVVDGTNKYLDDSAAVRGRVEKILEDNLSDFNTSIENNQEALRELDDKVSMLSDMLPEI
NGKVCDRSGDPCDDVCGGGGCGSCGGPSCEKGAVTRADNALDLAMKAETLLNVKENNAQG
LATNVSRAHDLSQMAKMEAQMAFAEASKAKTASEDTRADLEKLLTDVRDFLQLNGAEPKN
IEATANEVLAMTISLQPEQVIQLAQEINQTIQGLQNIDNILDDTREDLGTAEKLKERAEN
ASKAAAAILDIAQGVLKALNGSKEAQDKAKMAIDQADSDISDAQTDLTQIESETTAAEEK
SKNTMDKVDTLRENLDGLQTKITENEFKVKNAEDTANEAENLANQASTKAQSLEDQYPDV
LNKLNDKYNSTADAKSRVENLRKRADDLATESTAKLKKLRDMNTEFENYEQQLVKLTSRI
DEYNANMTKYLEAIQQKANDYRTCTT
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcctgcatataggattactgctgatagtttttacagtgtttcaagtggcctcg
ggccaggagtatgactaccgtctccagccccagtgtgagcaggggagttgttaccccgct
accggtgacctgcttattggacgagaaagcaacctcacggcaaattcaacatgtggtatt
gaccgacccgagcggtactgcattgttagtcatttggatgacgagaaaaagtgttttctg
tgtgactcccgaaatgtttggtcgcagtcagctccaaacagccacaggattgaaaatata
gtgtcctcttttcgtgagaggaaatttaagtggtggcaggcagaaaatggtgttcaacat
gtgtacattcagcttgacttagaggcggaatttcactttactcatttaattatgactttc
aagacatttagaccaaaggcgttgtacgtagagcgatcattcgattttggcaattcttgg
aaaatttataggtattttgcttatgattgtgccaagtcgtttcctggagtggcaacagga
cctttccggaatttgaccgatgttatctgtgtttccaaatactctgatgtcgtgccttcg
tcagaaggagagttggtgttccgtgtgttgccgccatttttccgtatcagcgacccttac
agtaaagacgtacaggacctgctcaaactcaccaacctccgtgttgtcttcacagaactg
cacacactaggtgacacagtgtttgacggtcgccaggatatccgtgagaagtattactac
tccatgtacgacatgacagtaagaggtagctgctcgtgttacggccatgcttcccgatgt
gttcctgttgatggatataacaatgaaaacaatctcaatatggtaaatggcatgtgtgaa
tgtacccacaatacgaagggcctgaattgtgaactgtgtcaggacttctacaacgataaa
ccatggagacctgcacaacattccgacaccaacgcctgtcagagatgtgagtgttacaac
catgctactgcctgtcattttgatgcgggtgtatacgaactgacggggcgtgtgagcggg
ggagtgtgtgacgactgtcagcacaacacgatgggccgcaactgccaagaatgtcgggct
ggctacttccaggaccccaacaaggagctgtatgacccaaatatctgtcaacagtgtgac
tgtgaccctaccggttccctgtatgatggtgagtgtgagcgtatgacagacgaggagctt
ggtctggaggcagggcgctgtaactgtaagacatatgtgacgggtcgtaggtgtgactcc
tgtatagatgggtactggaacctcctcgatgacaaccctaatggatgtgaagcctgcacc
tgtgatcccatgggaacgctggagaactttggatgtgaccagtacacaggctactgtacc
tgtaaacgttacgttaccggcaagaactgtgaccagtgctatcctgggttctggggaatg
agcaatgacctgaacggatgtcgcccatgtgactgtgatgtgggaggagcaacgagtgac
gcatgtgatgtcgagacgggccagtgcacatgtaaagacaacatccaggggagacagtgt
caccaggtccagcctggatatttcttcactagaatggactggtacacttatgaggcagaa
tttgctgaaggatttgggaacacacgtgtttatatccgtgagctaattccggactaccgt
agctggacggggccgggctacatgcgggtgatcgagggtgatgccattctgttttccgat
atctccgtagacttccccatgtactatgacattgtcatcagatacgaccagaggatgaca
gagaagtgggatgatgttcgtgtacgagtgattcgtccagacattgtcgacagggacgga
ccgtgtgccaacgccattcctcaagatgatgataaggctgtcatgttgcaacagagttct
aggtttgtgactgtggagccctctgtctgcctggagagtgggcaaaactacagcatccgg
atcgagttcagccgatacaagagtgaccgacaaaccccagacgcaactgtccttattgat
agtatcatcctggtccctaacacggaaagcatcccgatcttccttggtcccgggctcccc
gattacatgaagaacgagtacctgcgttaccgatgtcgtgaactccagttgcacgtgcac
cagccagaactgccagatctctgcaagaagcatgtgttctccatctccggcattatccac
catagggcacttgattgtgactgtgacctgacaggttctctgagttttgagtgtgaccca
gtgggaggccagtgtcagtgtaaggaacacgtggtgggacgtcgttgtgaccagtgtgct
ccgggcacttatggattcggaccaaatggatgcacaccttgtaattgccatgcaattgga
gccagagataacttctgtgacattgagaccggtcagtgtttgtgtatccccaatgttcac
aagcgaatctgcgaggaatgtgaacctggttactatggtttcccgtactgccgagcatgt
gattgtaacgggaatgctgaaacctgtgataacctgactggagagtgtatttcctgtaca
gacaacacaacaggggctcactgtgaaagatgtctggctggtttctatggcgacccacgg
ttggatgtgcgtgagccatgtcgtgcctgtatgtgccctggcggtccgtacagcaatgcc
cagcatgccgatacttgttactacgaccctagactggaatacgttgtctgtgaatgtgac
attggctacaaagggcctgactgcggtgtatgtgatgagaactactttggaaatcctcaa
gaagacaacggtacatgtgggatgtgtgaatgtagcggaaatattgacccagatgatatc
gggaactgcgaccacgagacaggggaatgcctcaagtgtctattcaacaccgagggcttc
aactgtgagaaatgtgaagccggttactacggcgatgcactcactcaaaattgtatcgag
tgtgtctgcaaccctattggcacaaacaagtcagctggagattgtgaccgagtgtcaggg
cagtgcccatgtctgcccaacgtcgtgggtcagaagtgtgacatgtcggccccaggattc
tggaacatgactgagaaaatcggggccatcacatgtgcctgcgacccagacggaagcttt
ggctttgagtgtaatgagttcacaggccagtgtgactgcttgatggggcgtggtgggcgc
acatgtagcgagtgtgaggacctgttttggggagaacccactgaggagtgctacccatgt
gagtgtgacgtacaaggctcagcgcaggcccagtgtgaccgcaaaaccggccagtgtgtg
tgtaaggtgggaatcagtggctacaagtgtgaccgatgtgaccggggaaccaccggggag
ctgcccaactgtgtgccctgcggagattgctttgacaactgggatagggttgtcagggac
cttagggaccaaactagctcactggtaagccaggctgagaatatcgccattgagggtgcg
gccggggcgtttgacaaggagttccgtgtgatggaggataacctggctgagatacgaaga
atcgtggagggtgcaggcgtatcttcttatgacgttgaggagttacagatgatgattaaa
accatgagggagaacctgactgccaacatcgaggacctggataccatggatgagaacctc
cagaccactatgggtcgtatacaggaggggaacagtcgcatatctgccctacagctaggt
gtagaggaactcaacaagaaggccgagttgctccggaaaaatgctagcgatatacaggct
caggacgttgaaggtgcaatcaacatcacacgagaggctgaacagaggtccctgcaggca
cagagtgtagtggatggcaccaacaagtacctagatgactctgccgctgttcgtggccgt
gtagagaaaatcctggaagacaacttaagtgacttcaacacaagtattgagaacaaccag
gaggccctcagagagcttgacgataaagtgtctatgctcagtgatatgctcccggaaatt
aatggcaaagtgtgtgatcgttcaggtgacccatgtgatgatgtgtgtggcgggggtggg
tgtggctcttgtggagggcccagctgtgaaaaaggggctgttaccagggcagataatgcc
ctggacctggccatgaaggcagaaactctcctgaatgtaaaggaaaacaatgctcaagga
cttgcaacaaatgtttcccgtgcccatgacctttcccagatggccaaaatggaggcccag
atggcatttgctgaggcgtcgaaggccaagacggcctcagaggacacgagagctgaccta
gagaaactcctgactgatgtgagagatttcctgcagctgaatggggcagaaccaaaaaac
atagaggctaccgcgaatgaggtactggctatgacaatctcgctacagcctgagcaggtg
atccaacttgcccaggagattaaccagacaatccagggtctacagaacatcgacaacatc
cttgatgacacacgtgaggacctcggcactgctgagaagctcaaagagagagcagaaaat
gcctcaaaggcagcagcagccatcttggacatagcccagggtgttttgaaggcactgaac
ggctcaaaggaggctcaagacaaggctaagatggccatcgaccaagccgacagtgacatc
agcgatgcccaaaccgatcttacacagatcgagtcagaaactacggccgcagaggagaag
tctaagaacacgatggacaaggtggatacgttgcgggagaacctggacgggctacagaca
aagattaccgagaatgagttcaaggtgaaaaatgccgaggacacagctaatgaggcagaa
aacctcgctaaccaggcatctacgaaagcacaaagtcttgaagatcagtacccagatgtt
ttgaataaactgaacgacaaatacaactcgactgctgatgccaagagcagggtggagaat
ctgagaaagcgtgccgatgacctggccacagaatctactgccaaactgaagaaattaaga
gatatgaacacggagtttgagaattatgaacagcagcttgttaagctaaccagtcgtata
gatgaatataatgctaatatgaccaaatacttggaggctattcaacagaaggccaatgac
tatagaacatgtacaacatag
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