Mya arenaria (softshell): 128217189
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Entry
128217189 CDS
T09995
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
maea03016
]
128217189
Enzymes [BR:
maea01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
128217189
Transfer RNA biogenesis [BR:
maea03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
128217189
Prokaryotic type
128217189
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
DUF2298
Motif
Other DBs
NCBI-GeneID:
128217189
NCBI-ProteinID:
XP_052780103
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All DBs
Position
14:9969913..9989037
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AA seq
631 aa
AA seq
DB search
MSLFFNWGVYKVKNQMEHDDGDVSCAKRQRLENSKDTDRCTDKEDIQEENSADNAYSTGP
VREDDVGITEYISTLPGFSGILKQRYSDFLVNEISLDGEVVRLTNTDLPCPLPQATPQVE
TGSLALVSREDADKLTELLQSKDTSRCVTIQASTDKGERTRMHAEISRCFPGLETDTVVD
GDNRLIQARITTNKGNARHNWPKGRGDYCRFVLYKENKDTMDAVGLIAKMISLKSSLFQY
CGTKDRRGKTSQHISVYKVAPEKLRGLNKKLRNIVLGNFSYVEKPLQLSGAQGSKFTVVL
RSVTGSQDQIDAGMTSLRETGFINYFGMQRFGTSAIPSHHIGRALLLGDFKTAVELILKP
RPGDTQDEQLTAARQFWWEKRDSKAAINKFPKFSYIERNILSGLVGNENNFLGAFQKLSR
NNRLMYVHAYQSYIWNVSTSHRVKKYGLKPMVGDLVIPGVGDYRQEEDTDEQASEDSDSK
PKPVIVTAENIAEYSIYDVVLPTPGHFSVYPDNDIKSLYKELMEKDGLDYTDMKRKQKDF
SLPGTYRHILVKPKDVSWQLHHYDDPNIPLVLSDWDIIKEEKLPENTNEGSKLALEVTFS
LPPSCYATMALRDLLKIDTSAGYHTSLTNAT
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgtttttcaattggggtgtgtataaagtcaaaaaccagatggagcatgatgat
ggcgatgtatcctgtgcaaaaaggcagcgcttagaaaacagcaaagacacagacagatgc
acagacaaagaagacatacaagaagaaaactcagcggacaatgcctattcgacaggtcca
gtcagggaggatgatgttgggataacagagtacatctcaacattgccaggcttctcagga
attctcaaacagaggtactctgacttcttggtgaatgagatcagcctggatggtgaggtt
gtgagactaactaacactgacctgccctgtccactaccccaagcaacaccacaggtagag
acgggatccctggcactggtctcaagagaggatgctgacaagctcactgagctcctacag
tctaaagacacgtccaggtgtgtcaccatacaggcatcaacagacaagggtgagaggaca
agaatgcatgccgagatatcacgatgtttcccggggctagagacggatacggtggtggac
ggggacaataggctgatacaggcccgaatcactacaaacaagggcaatgcgcgtcacaac
tggccgaaggggcgtggagattactgccggtttgttctctacaaggaaaacaaggatacc
atggatgctgtgggcctcatagccaagatgatcagtctgaagagcagcctgttccagtac
tgtggaaccaaggacagacgagggaaaaccagccagcacatctcggtctacaaggttgcc
ccagaaaaactacgaggtctcaataagaaactaagaaatatagtccttggaaatttcagc
tatgtggagaagcccctacagttgagtggtgctcagggtagcaagtttacagtggttcta
cggtctgtgactggttctcaggatcaaattgatgctgggatgacctcgctgcgggagacc
ggcttcatcaactactttggcatgcaacgtttcggcacctcggctataccatctcatcat
atcggcagggccttgttgttgggagacttcaagacagctgtagaactgattctgaagcca
agaccaggagacacacaagatgaacagttgactgctgcacgccagttttggtgggagaag
cgagacagcaaggcggctatcaacaagtttcccaagttttcttacattgagaggaacatt
ctgtctggacttgtaggcaatgagaacaacttccttggggctttccaaaagttatcacgc
aacaaccgactgatgtacgtacatgcctaccagagttacatatggaacgtgtccacatcc
catcgagtcaagaaatacgggcttaaacccatggttggggaccttgtcataccaggggtg
ggggactaccgacaggaagaggacacagatgagcaagcaagtgaagattctgacagcaag
ccaaagcctgtgattgttactgcagaaaatattgctgagtacagtatctatgatgtggtg
ttgcccacgcctggacacttttccgtgtacccagataatgacatcaagtcactgtataag
gaactcatggagaaagatggtcttgattacacagacatgaagcggaaacaaaaggacttt
tccctaccagggacttatagacacattcttgtgaaaccaaaggacgtatcctggcaactc
catcactatgatgacccaaacattccccttgtgctcagtgactgggacatcatcaaggaa
gaaaaactgccagaaaacacaaacgaaggcagtaaacttgcactggaggttacattttcc
ctccctccgtcctgctatgctaccatggctttacgagacctgctcaaaatcgacacgtca
gcagggtatcacacctcattgactaacgcaacttga
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