Mya arenaria (softshell): 128217239
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Entry
128217239 CDS
T09995
Name
(RefSeq) toll-like receptor 4
KO
K18808
toll-like receptor 13
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
maea04054
]
128217239
Pattern recognition receptors [BR:
maea04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
128217239
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR_2
TIR
LRR_Zer-1
FACT-Spt16_Nlob
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
128217239
NCBI-ProteinID:
XP_052780193
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Position
2:11291413..11302249
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AA seq
928 aa
AA seq
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MGFQYECFVWILLLVVANGRYEEIGEHLSPNGDCTKRTCDASNASAAINGSKCSTESIGC
GKQLACDGKLFDSIPEEYPNISDPICSLNLSNNAISNIPNKAFSLTSLQLEYILYLYLDD
NMIQFICPEGFYGLTNLKFLSLSANIQLTWPDSFMNGIFAPMVRLESLNLQGSKFNNFTG
LGKEMKMLKNLRNLSLSPSSGIGHYFFEKEFLELKNLTNISFYDMPGDCKIYNISDNAFE
NVPYVKVLNLANCHIKTISRQALKPLNSSLRELHLSHNDELEFSGMNDALAGLENSTALI
RLRANQIHQFLGIGMTLKVGDIQYLKTLKALAHLFLDLNKIEIIDKQILHPTYMLPRSLR
TLTLAGNRLVADEYMNYMYKITNITFLDISRQHLNYNPFSLYAVPNGVQTTRLVDVNSFI
DNTTQTINVNEDFVKLFYSEMATSDWGDIYEKGFFEFTLDCTCNHTWASKKNLGLIFIPP
DIKTIKWSNSHIYTQIYPLILCVTKALSSLDLSRNILYKWKGPILGLQHLKKLDLSDNYC
SKISDWFFIGFTELEDLNISKNNLTSNFKPGSPNYNADKLFTNLKNLRKLDMSEIRITTL
SKFVFQNLIFLESLVLDNNYLKVLSFELKSNNFQWLSIAGIKLTFLPEAITHYLDVQATK
HNVILNMPFLGLECSCEQLPFWKWLNTTKVTIKVHNGDRCMLNGKPQRLENHSDYLKVVN
TLEHVECIDRTWVAWAISGSSALVAVVLTLIISTIVYRNRWKLRYVYYSRKRRYVHTGFD
RLFSNDAMISYAKGKASFIKNSVVPSLQDTHDLSLWIHDRDSAAGESVAENIIHAICTSR
KTVLFIDKEYLADSWCKYDMNIAVLESVETTRKLIIVVRMDGLNADQMPIPVLRLLRNER
SLDYPDSENDSELETFWNKLAIEIRKID
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgggcttccagtacgaatgtttcgtttggattttgcttttggtcgtagcaaatggtcgg
tatgaggagattggggaacatcttagtcctaacggagactgcacaaaaagaacatgtgat
gcatcaaacgcatcagctgccataaacggttctaaatgttctactgaaagcatcgggtgt
ggcaaacagctagcttgcgacgggaaactgtttgacagtatcccagaggaataccccaat
atctctgatcctatatgttctcttaacctgagtaataatgcgatttcgaatattccaaac
aaagccttcagtctaactagcttacagttagaatatattttatacctgtacttagatgat
aacatgatacagttcatatgtcccgaaggattctatggacttacgaatcttaagtttctt
agcctctctgcaaacatacaactaacatggccggacagttttatgaacggaattttcgca
ccgatggttagattggaatcattaaatttacaaggctcaaaattcaataacttcacagga
ttgggtaaagaaatgaaaatgctgaagaatctgagaaatttgtccttgagtccatcatct
ggaattggacattatttctttgagaaggagtttttggaactgaagaatcttacgaacatc
agtttttacgatatgccgggtgattgcaagatctacaatataagtgacaatgcattcgag
aacgtcccatatgtaaaagttcttaatctcgctaattgtcatatcaaaacaatcagtcga
caagcattgaaacctctgaacagttctcttcgtgaacttcatctatcgcataacgacgag
ctcgagttttcaggaatgaacgacgcattggctggcttggagaattccactgcattgatt
agattaagagccaatcagatacaccagttccttggtataggtatgacattgaaagtaggc
gacatccaatacctaaaaacacttaaagcactagcacatttgtttttggatctaaacaaa
atcgagattattgacaagcaaatactacatccaacgtatatgcttccgcggtcactcaga
acgttaaccctggctggaaacagactagtagctgatgaatatatgaattacatgtacaaa
atcacaaacatcacatttctcgatatttcaaggcagcatcttaattacaacccattttcg
ttatatgcagtaccgaatggagttcaaacgacacgtttagttgatgtcaactcttttatt
gacaatacaactcaaacaataaatgtgaatgaagactttgttaaattattttacagtgaa
atggcgacgtcagattggggagatatctacgaaaaaggatttttcgagtttacattagac
tgtacatgcaaccatacatgggcatcgaaaaaaaaccttggacttatattcattccaccc
gatattaaaacaattaaatggagcaacagccatatatatacccaaatttatccattgatt
ttgtgcgttactaaagcgttgtcatccctagatctttccagaaacatactttacaagtgg
aaaggacccatattaggattacaacatttaaaaaagttagatttatcagacaattattgt
agtaagataagtgattggtttttcatcggatttacagaattggaagatttgaacatatcc
aaaaacaatctcacgagcaatttcaaacctggatctccaaattataatgccgacaagctg
tttacaaatttgaagaacttgagaaaacttgacatgtcagaaattagaataaccaccctg
tcaaagttcgttttccaaaacttaatatttctagagagtttggtgctcgataacaactat
cttaaagtattgtctttcgagctgaagagcaataactttcaatggctctccatagcagga
atcaagctcacatttctgcctgaagccattactcattatttggacgtgcaagcaacgaaa
cataatgttattttgaacatgccctttctaggtctagaatgctcgtgcgagcagctgccg
ttctggaaatggttgaatacgaccaaagtaaccatcaaagttcataacggcgatcgatgc
atgctgaatgggaagccacaacgtcttgaaaatcattctgattatttaaaagttgtaaac
acattggaacacgttgaatgcatagaccgaacatgggtagcttgggccatatctggaagc
agtgcactcgttgccgtagtgttaacactaatcataagcaccattgtataccgaaatcga
tggaaactgcggtatgtttattatagcagaaagcgtcgatatgtgcatacaggatttgat
cgcttgttttcaaatgacgccatgatttcttacgccaagggaaaggcaagctttatcaag
aactccgtcgtaccttcgctgcaggacacccatgatctctcgctttggatacatgacaga
gattcagctgcgggtgaatctgttgccgagaatattatacatgcaatctgtacaagtcgc
aaaaccgttctcttcattgacaaagaatatcttgctgactcgtggtgcaagtatgacatg
aacattgctgtgttggaatctgtggaaaccacaagaaagctgattattgttgttcggatg
gatggactaaatgcggatcaaatgccaattccagttcttaggctgctgcgaaatgaacgg
tcgctggattatccagactctgagaacgacagtgagcttgagactttctggaataagctt
gccattgaaataagaaaaatagattaa
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