Mya arenaria (softshell): 128217242
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Entry
128217242 CDS
T09995
Name
(RefSeq) toll-like receptor 4
KO
K18808
toll-like receptor 13
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
maea04054
]
128217242
Pattern recognition receptors [BR:
maea04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
128217242
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
TIR
TIR_2
LRR_1
LRR_EndoS
LRR_5
LRRNT
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
128217242
NCBI-ProteinID:
XP_052780207
LinkDB
All DBs
Position
2:complement(11168903..11173642)
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AA seq
917 aa
AA seq
DB search
MTSGIFTTVAVLLILQLSQNVGGTDVPCPPCSCIKNENNELLVNCSNRNLTAVPSFNRIR
KNSIISLNMSVNVLKNLTRITVSPFQEFRQLKSLDLYNTGLGAFKYSVLTSETFKGLSNL
ENLNLSKNSRSPFNGDTDENIFSNLTSLKSLLMFQTTGTYNEGKGYADKALAKLTTLEEL
WLDGLPNATFGEVFRNLTSLKTLKISGRKVDPSWLWTEFCFIGIIRNNSLTNLINVKRLT
ISNCGLTEIHPDAFLGLTSRLELLDFSYNTKLGKSNVTTYLKSLKSGLDELIIDNIVNPY
CLECDLIITKEMAENLAHLNLKHLSMRRNKIKAVKEDVFEKLPSIISADLSFNRFSMGYY
IFYAQKMKHLKHLDISYNYFDLDFNFWSHIGAGKHKFGDSERTKYKQYIHDMFFRAEKRM
ASNFDPVQTTRKLLSSGDRCPKGTYHIPPAACTGLLPPEMEEIDISFSNLGVPIYEFYVH
KNNSLKTVKAAGCMLYCWEGPIHGLQVIENIDLSFNFCNHVEPDFFSRFKTVKNMDLSNN
FLSGSIAKTPLFEDNLELEVLNISNNKLSKIHLDMFKSQRNLRHLRLCKNVMMDFEINIS
HLTQLQYLDLSGNNIRVLSEPLWKVYIPNILNQRESGQLIIDLRENPIECKCENLDFLKW
IHSNMENGSTLYVRVSYCLLKDMSNVNISDKNQMNTQIEYLEKICTSYTYLIVILNVVMA
IAVNIIIAGIVHRYRWRIRYWFYVSWNKSESRKGYTSLDNRDPFMFGYKYHVYVASFEED
KEFLMEHLAPKLREKGCKLFLQNDDILPGQNMYNVIGNALHVSRALLCVVSKSGCLSTEE
WKVLMHMAHEEMHQRDKRMCLTMVLDTDNGSLSLPRSLQEICVQEVIDYPNNEADQPAFW
DDVKEKLIQIDNTPVYM
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccggaattttcaccacggtagctgttttgctcattttacaattatcgcaaaat
gttggcggcacagatgttccatgtcctccttgttcctgcattaaaaatgaaaataacgag
ctacttgtgaactgttcgaatagaaacttaaccgccgttccaagctttaatcgcattaga
aagaattcaatcataagtctaaatatgtcagtgaatgttctcaagaacttgacgaggatt
actgtatctcctttccaggaatttagacaattaaaatcactggacttatacaacaccggt
ctaggcgcattcaaatacagtgtattgacttctgaaacattcaaaggcctgtcaaatttg
gaaaatcttaacctatctaaaaacagtcggtccccatttaatggtgatacggatgaaaat
atattttctaatttgacatccttaaaaagtttactcatgtttcaaacgacaggaacatac
aatgaagggaaggggtatgcggacaaagcactagccaaactgacaaccctagaagaatta
tggctcgacggtcttcctaatgctacatttggggaggtatttcgaaacctgaccagtcta
aaaacactgaaaatatctgggcgaaaggtcgacccatcgtggttatggactgagttttgt
tttatcggtattattagaaataactctttaactaatctcatcaatgtgaagagactgact
atctccaactgtggattgacagaaattcatcccgacgcctttttgggtttgacatctaga
ctggaactgttggatttttcatataataccaaactcggtaaaagtaatgtaacaacctat
cttaaaagcttaaaaagtgggttggatgagctaattattgataatatagtaaatccatat
tgtctggagtgcgacctcataataacaaaagaaatggcggagaatctggctcacttgaat
ctaaagcatctatcaatgcgacgaaataagatcaaagctgtaaaggaggacgtgttcgaa
aaactaccatctattataagtgcagatcttagttttaaccgattctccatggggtattac
atattctatgcgcagaaaatgaaacatctgaaacatcttgatatatcgtacaattatttc
gatttggatttcaacttttggagccacattggcgcaggtaagcataagtttggtgacagc
gagaggaccaaatacaaacagtatatacatgacatgttcttcagagccgaaaaaagaatg
gcgagtaattttgaccctgttcagacgactcgcaaattacttagctctggagatcgttgc
ccaaagggaacttatcacattccaccggcagcatgtaccggactgttaccaccagaaatg
gaagaaatcgacatcagcttcagcaatctgggagtgcctatctatgagttttatgttcac
aagaacaacagtcttaaaactgtaaaggcggctgggtgcatgttatactgctgggaagga
ccaatccacggcttacaagtcattgaaaatatcgacttgagcttcaacttttgtaatcat
gtagaacctgatttcttttcgagatttaaaaccgtaaagaacatggatttatcgaataat
ttcctttctggctcaattgcaaaaactccgctttttgaggataatcttgaactagaagtt
cttaacatttcaaacaataaattatctaaaattcatctggatatgtttaaaagtcaaaga
aacctaaggcatttgaggctatgtaagaatgttatgatggattttgagataaatatctcc
catctgacacaacttcagtatttagaccttagtggaaataacattcgagtattatcagag
cccttgtggaaagtttatattcctaatatccttaaccaacgcgaaagcggacaattaata
atagatctaagagaaaatccgattgaatgcaagtgtgaaaatctggactttctgaaatgg
attcattccaatatggaaaacggttccacgctgtatgtacgtgtgtcgtattgcttgctt
aaagacatgtccaatgttaacatttctgacaaaaaccaaatgaacactcagatagaatat
cttgaaaagatttgcacatcatatacttatctcattgttattcttaatgttgtaatggct
attgctgtgaacattataattgccggtatagtacatagatacagatggagaatacgatat
tggttctacgtgagctggaataaatcggaatccagaaaaggttatacgtcacttgataac
cgcgatcctttcatgttcggatacaagtaccatgtttacgttgcatcgtttgaagaagat
aaggagtttctaatggaacatctggccccaaaacttcgtgaaaaaggctgcaaacttttc
ctgcaaaacgatgatatccttcctggccagaacatgtacaatgtaatcggaaacgcactt
cacgtcagtcgagcgctactttgtgtagtctctaaaagtggctgtcttagcacagaggag
tggaaggtcctgatgcatatggcacatgaagaaatgcaccaacgggacaaacgcatgtgt
ttgacgatggttttggatacagataatgggtctctgtccttgccaagatcattacaggaa
atctgtgtgcaggaggtgatcgattatccaaacaatgaagccgatcaaccggcgttctgg
gatgatgtgaaggaaaagcttattcagattgacaacacacctgtttatatgtag
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